/// <summary>
/// This should result in %BARCODE-%WELL-%DROP-R%R%RTP%P-%IT[%II]-z%Z-%DATE-%TIME, eg:
/// 441312000010-A01-2-R0DRP1-EF-z20-20100316-083621
/// 441312000010-A01-2-R0DRP1-FL1-z20-20100316-083621
/// </summary>
/// <param name="imageInfo"></param>
/// <param name="processingInfo"></param>
/// <param name="plateInfo"></param>
/// <param name="plateType"></param>
/// <returns></returns>
public static string GetFilename(IImageInfo imageInfo, IProcessingInfo processingInfo, IPlateInfo plateInfo, IPlateType plateType)
{
string filename = "";
filename += processingInfo.PlateID + "-";
filename += OPPF.Integrations.ImagerLink.PlateType.WellNumberToString(plateType, processingInfo.WellNumber) + "-";
filename += processingInfo.DropNumber + "-";
filename += "R" + processingInfo.RegionID; // Usually 0
switch (processingInfo.RegionType) // Usually Drop
{
case RegionType.Drop:
filename += "DR";
break;
case RegionType.Overview:
filename += "OV";
break;
case RegionType.RegionOfInterest:
filename += "RI";
break;
}
filename += "P" + processingInfo.ProfileID + "-"; // Usually 1
switch (imageInfo.ImageType)
{
case ImageType.BestFocus:
filename += "BF";
break;
case ImageType.DropLocation:
filename += "DL";
break;
case ImageType.ExtendedFocus:
filename += "EF";
break;
case ImageType.FocusLevel:
filename += "FL" + imageInfo.ImageIndex;
break;
}
if (imageInfo.IsZNull)
{
filename += "-zN-";
}
else
{
filename += "-z" + System.Convert.ToInt32(imageInfo.Z) + "-";
}
// Assuming ImagingID is plateID-DATE-TIME format.... (with no dashes in the plateID!)
filename += processingInfo.ImagingID.Remove(0, processingInfo.ImagingID.IndexOf("-") + 1);
return(filename);
}
public IImageProcessor GetImageProcessor(IRobot robot, IProcessingInfo processingInfo)
{
IPlateInfo plateInfo = _pip.GetPlateInfo(robot, processingInfo.PlateID);
IPlateType plateType = _pip.GetPlateType(robot, plateInfo.PlateTypeID);
return(new ImageProcessor2(robot, processingInfo, plateInfo, plateType));
}
/// <summary>
/// Construct an IImageProcessor instance for the specified IRobot and IProcessingInfo.
/// </summary>
/// <param name="robot">The Robot that took the images to be processed by this IImageProcessor instance</param>
/// <param name="processingInfo">The description of the images to be processed by this IImageProcessor instance</param>
public ImageProcessor2(IRobot robot, IProcessingInfo processingInfo, IPlateInfo plateInfo, IPlateType plateType)
{
// Get Logger.
_log = LogManager.GetLogger(this.GetType());
_dateImaged = DateTime.MinValue;
_lightPath = 0;
_robot = robot;
_processingInfo = processingInfo;
_plateInfo = plateInfo;
_plateType = plateType;
_captureInfo = null;
SetRegionName(_processingInfo.RegionID);
SetProfileName(_processingInfo.ProfileID);
_log.Info(
"DropNumber=" + processingInfo.DropNumber +
";ImagingID=\"" + processingInfo.ImagingID + "\"" +
";PlatedID=\"" + processingInfo.PlateID + "\"" +
";ProfileID=\"" + processingInfo.ProfileID + "\"" +
";RegionID=\"" + processingInfo.RegionID + "\"" +
";RegionType=" + processingInfo.RegionType.ToString() +
";WellNumber=" + processingInfo.WellNumber +
";Robot.Name=\"" + _robot.Name + "\"");
}
/// <summary>
/// This method is intended to cause any resources that are no
/// longer necessary to be released
/// </summary>
void IDisposable.Dispose()
{
_regionName = null;
_profileName = null;
_captureInfo = null;
_imageInfo = null;
_robot = null;
_processingInfo = null;
}
public void GetFilenameTest()
{
IImageInfo imageInfo = null; // TODO: Initialize to an appropriate value
IProcessingInfo iProcessingInfo = null; // TODO: Initialize to an appropriate value
ImageFormat imageFormat = null; // TODO: Initialize to an appropriate value
string expected = string.Empty; // TODO: Initialize to an appropriate value
string actual;
actual = FileUtils.GetFilename(imageInfo, iProcessingInfo, imageFormat);
Assert.AreEqual(expected, actual);
Assert.Inconclusive("Verify the correctness of this test method.");
}
public ImageProcessor(Formulatrix.Integrations.ImagerLink.IRobot robot, IProcessingInfo processingInfo)
{
// Get Logger.
_log = LogManager.GetLogger(this.GetType());
SetRegionName("");
SetProfileName("");
_captureInfo = null;
_imageInfo = null;
_robot = robot;
_processingInfo = processingInfo;
}
public void GetDirectoryTest1()
{
string directoryTemplate = string.Empty; // TODO: Initialize to an appropriate value
IImageInfo imageInfo = null; // TODO: Initialize to an appropriate value
IProcessingInfo processingInfo = null; // TODO: Initialize to an appropriate value
IRobot robot = null; // TODO: Initialize to an appropriate value
string expected = string.Empty; // TODO: Initialize to an appropriate value
string actual;
actual = FileUtils.GetDirectory(directoryTemplate, imageInfo, processingInfo, robot);
Assert.AreEqual(expected, actual);
Assert.Inconclusive("Verify the correctness of this test method.");
}
/// <summary>
/// Old-style filename generator.
/// DEPRECATED. See GetFilename(IImageInfo, IProcessingInfo, IPlateInfo, IPlateType).
/// </summary>
/// <param name="imageInfo"></param>
/// <param name="iProcessingInfo"></param>
/// <param name="imageFormat"></param>
/// <returns></returns>
/// <see cref="GetFilename(IImageInfo, IProcessingInfo, IPlateInfo, IPlateType)"/>
public static string GetFilename(IImageInfo imageInfo, IProcessingInfo iProcessingInfo, System.Drawing.Imaging.ImageFormat imageFormat)
{
string filename = "";
filename += iProcessingInfo.PlateID + "-";
//filename += iProcessingInfo.WellNumber + "-";
int col = iProcessingInfo.WellNumber % 12;
if (col == 0)
{
col = 12;
}
int row = (int)((double)iProcessingInfo.WellNumber / 12.0);
if (col == 12)
{
row--;
}
char rowChar = (char)(row + 65);
string wellRef = "" + rowChar + String.Format("{0:00}", col);
filename += wellRef + "-";
filename += iProcessingInfo.DropNumber + "-";
if (imageInfo.IsZNull)
{
filename += "z0-";
}
else
{
filename += "z" + imageInfo.Z + "-";
}
filename += iProcessingInfo.RegionID + "-"; // 0
filename += iProcessingInfo.RegionType + "-"; // Drop
filename += iProcessingInfo.ProfileID + "-"; // 1
filename += imageInfo.ImageType + "-";
//Assuming the imageID is plateID-DATE-TIME format.... (with no dashes in the plateID!)
string imagingID = iProcessingInfo.ImagingID;
string dateTime = imagingID.Remove(0, imagingID.IndexOf("-") + 1);
filename += dateTime;
filename += "." + imageFormat.ToString().ToLower();
return(filename);
}
protected virtual void Dispose(bool disposing)
{
if (!this.disposed)
{
if (disposing)
{
// dispose managed resources
}
// free native resources
_regionName = null;
_profileName = null;
_captureInfo = null;
_imageInfo = null;
_robot = null;
_processingInfo = null;
disposed = true;
}
}
IImageProcessor IImageProcessorProvider.GetImageProcessor(IRobot robot, IProcessingInfo processingInfo)
{
return(new ImageProcessor(robot, processingInfo));
}
public IImageProcessor GetImageProcessor(IRobot robot, IProcessingInfo processingInfo)
{
return(new ImageProcessor(robot, processingInfo));
}
/// <summary>
/// Build a directory from the specified directoryTemplate, imageInfo and processingInfo.
/// Special substrings %date% and %plateid% will be replaced with the values from the
/// specified processingInfo.
/// </summary>
/// <param name="directoryTemplate">The template for the directory</param>
/// <param name="imageInfo">The imageInfo (currently unused)</param>
/// <param name="processingInfo">The processingInfo from which to obtain %date% and %plateid%</param>
/// <returns>The directory name</returns>
public static string GetDirectory(string directoryTemplate, IImageInfo imageInfo, IProcessingInfo processingInfo, IRobot robot)
{
string directory = directoryTemplate;
string imagingID = processingInfo.ImagingID;
string dateTime = imagingID.Remove(0, imagingID.IndexOf("-") + 1);
string date = dateTime.Remove(dateTime.IndexOf("-"), dateTime.Length - dateTime.IndexOf("-"));
if (directory.IndexOf("%date%") >= 0)
{
directory = directory.Replace("%date%", date);
}
if (directory.IndexOf("%plateid%") >= 0)
{
directory = directory.Replace("%plateid%", processingInfo.PlateID);
}
if (directory.IndexOf("%robot%") >= 0)
{
directory = directory.Replace("%robot%", robot.Name);
}
if (!((directory.EndsWith("/") || (directory.EndsWith("\\")))))
{
directory += "/";
}
return(directory);
}
/// <summary>
/// Build the directory for web images from the specified imageInfo and processingInfo.
/// Special substrings %date% and %plateid% will be replaced with the values from the
/// specified processingInfo.
/// </summary>
/// <param name="imageInfo">The imageInfo (currently unused)</param>
/// <param name="processingInfo">The processingInfo from which to obtain %date% and %plateid%</param>
/// <returns>The directory name for web images</returns>
public static string GetDirectory(IImageInfo imageInfo, IProcessingInfo processingInfo, IRobot robot)
{
return(GetDirectory(OPPF.Utilities.OPPFConfigXML.GetWebDirectory(), imageInfo, processingInfo, robot));
}
