public NeuronBackPointer(INeuron neuron, INeuronContainer container, NeuralLink[] links)
{
this.Neuron = neuron;
this.Container = container;
this.Links = links;
}
/// <summary>
/// This is used when saving to DNA.
/// Individual parts don't hold links, so when you call PartBase.GetNewDNA, the links will always be null.
/// This populates dna.InternalLinks and dna.ExternalLinks based on the links stored in outputs.
/// </summary>
/// <param name="dna">This is the dna to populate</param>
/// <param name="dnaSource">This is the container that the dna came from</param>
/// <param name="outputs">This is all of the containers, and their links</param>
public static void PopulateDNALinks(ShipPartDNA dna, INeuronContainer dnaSource, IEnumerable<ContainerOutput> outputs)
{
// Find the output for the source passed in
ContainerOutput output = outputs.Where(o => o.Container == dnaSource).FirstOrDefault();
if (output == null)
{
return;
}
// Internal
dna.InternalLinks = null;
if (output.InternalLinks != null)
{
dna.InternalLinks = output.InternalLinks.Select(o => new NeuralLinkDNA()
{
From = o.From.Position,
To = o.To.Position,
Weight = o.Weight,
BrainChemicalModifiers = o.BrainChemicalModifiers == null ? null : o.BrainChemicalModifiers.ToArray() // using ToArray to make a copy
}).ToArray();
}
// External
dna.ExternalLinks = null;
if (output.ExternalLinks != null)
{
dna.ExternalLinks = output.ExternalLinks.Select(o => new NeuralLinkExternalDNA()
{
FromContainerPosition = o.FromContainer.Position,
FromContainerOrientation = o.FromContainer.Orientation,
From = o.From.Position,
To = o.To.Position,
Weight = o.Weight,
BrainChemicalModifiers = o.BrainChemicalModifiers == null ? null : o.BrainChemicalModifiers.ToArray() // using ToArray to make a copy
}).ToArray();
}
}
public NeuralLink(INeuronContainer fromContainer, INeuronContainer toContainer, INeuron from, INeuron to, double weight, double[] brainChemicalModifiers)
{
this.FromContainer = fromContainer;
this.ToContainer = toContainer;
this.From = from;
this.To = to;
this.Weight = weight;
this.BrainChemicalModifiers = brainChemicalModifiers;
}
public ContainerOutput(INeuronContainer container, NeuralLink[] internalLinks, NeuralLink[] externalLinks)
{
this.Container = container;
this.InternalLinks = internalLinks;
this.ExternalLinks = externalLinks;
}
public ContainerInput(long token, INeuronContainer container, NeuronContainerType containerType, Point3D position, Quaternion orientation, double? internalRatio, Tuple<NeuronContainerType, ExternalLinkRatioCalcType, double>[] externalRatios, int brainChemicalCount, NeuralLinkDNA[] internalLinks, NeuralLinkExternalDNA[] externalLinks)
{
this.Token = token;
this.Container = container;
this.ContainerType = containerType;
this.Position = position;
this.Orientation = orientation;
this.InternalRatio = internalRatio;
this.ExternalRatios = externalRatios;
this.BrainChemicalCount = brainChemicalCount;
this.InternalLinks = internalLinks;
this.ExternalLinks = externalLinks;
}
private static Transform3D GetContainerTransform(Dictionary<INeuronContainer, Transform3D> existing, INeuronContainer container)
{
if (!existing.ContainsKey(container))
{
Transform3DGroup transform = new Transform3DGroup();
transform.Children.Add(new RotateTransform3D(new QuaternionRotation3D(container.Orientation)));
transform.Children.Add(new TranslateTransform3D(container.Position.ToVector()));
existing.Add(container, transform);
}
return existing[container];
}
private static void BuildNeuronVisuals(out List<Tuple<INeuron, SolidColorBrush>> outNeurons, out ModelVisual3D model, IEnumerable<INeuron> inNeurons, INeuronContainer container, ItemColors colors)
{
outNeurons = new List<Tuple<INeuron, SolidColorBrush>>();
Model3DGroup geometries = new Model3DGroup();
int neuronCount = inNeurons.Count();
double neuronRadius;
if (neuronCount < 20)
{
neuronRadius = .03d;
}
else if (neuronCount > 100)
{
neuronRadius = .007d;
}
else
{
neuronRadius = UtilityCore.GetScaledValue(.03d, .007d, 20, 100, neuronCount);
}
foreach (INeuron neuron in inNeurons)
{
MaterialGroup material = new MaterialGroup();
SolidColorBrush brush = new SolidColorBrush(neuron.IsPositiveOnly ? colors.Neuron_Zero_ZerPos : colors.Neuron_Zero_NegPos);
DiffuseMaterial diffuse = new DiffuseMaterial(brush);
material.Children.Add(diffuse);
material.Children.Add(new SpecularMaterial(new SolidColorBrush(UtilityWPF.ColorFromHex("80C0C0C0")), 50d));
GeometryModel3D geometry = new GeometryModel3D();
geometry.Material = material;
geometry.BackMaterial = material;
geometry.Geometry = UtilityWPF.GetSphere_LatLon(2, neuronRadius);
geometry.Transform = new TranslateTransform3D(neuron.Position.ToVector());
geometries.Children.Add(geometry);
outNeurons.Add(new Tuple<INeuron, SolidColorBrush>(neuron, brush));
}
model = new ModelVisual3D();
model.Content = geometries;
//model.Transform = new TranslateTransform3D(position.ToVector());
model.Transform = GetContainerTransform(new Dictionary<INeuronContainer, Transform3D>(), container);
}
private static Transform3D GetContainerTransform(Dictionary<INeuronContainer, Transform3D> existing, INeuronContainer container, Vector3D centerOffset)
{
if (!existing.ContainsKey(container))
{
Transform3DGroup transform = new Transform3DGroup();
// Get the largest neuron position, and create a scale so that it fits inside of the container's scale
double maxRadius = Math.Sqrt(container.Neruons_All.Max(o => o.Position.ToVector().LengthSquared));
if (maxRadius > container.Radius && !Math1D.IsNearZero(maxRadius))
{
double scale = container.Radius / maxRadius;
transform.Children.Add(new ScaleTransform3D(new Vector3D(scale, scale, scale))); // this needs to be added to the group before the others?
}
transform.Children.Add(new RotateTransform3D(new QuaternionRotation3D(container.Orientation)));
transform.Children.Add(new TranslateTransform3D(centerOffset + container.Position.ToVector()));
existing.Add(container, transform);
}
return existing[container];
}