protected override void Context()
{
_view = A.Fake <IParameterIdentificationSimulationSelectionView>();
_treeNodeFactory = A.Fake <ITreeNodeFactory>();
_applicationController = A.Fake <IApplicationController>();
_lazyLoadTask = A.Fake <ILazyLoadTask>();
_treeNodeContextMenuFactory = A.Fake <ITreeNodeContextMenuFactory>();
_multipleTreeNodeContextMenuFactory = A.Fake <IMultipleTreeNodeContextMenuFactory>();
_dialogCreator = A.Fake <IDialogCreator>();
_parameterIdentificationTask = A.Fake <IParameterIdentificationTask>();
sut = new ParameterIdentificationSimulationSelectionPresenter(_view, _treeNodeFactory, _applicationController, _lazyLoadTask, _treeNodeContextMenuFactory,
_multipleTreeNodeContextMenuFactory, _dialogCreator, _parameterIdentificationTask);
_parameterIdentification = new ParameterIdentification();
_simulation = A.Fake <ISimulation>().WithId("Id").WithName("S");
_parameterIdentification.AddSimulation(_simulation);
_outputMapping = new OutputMapping
{
OutputSelection = new SimulationQuantitySelection(_simulation, new QuantitySelection("PATH", QuantityType.Drug))
};
_parameterIdentification.AddOutputMapping(_outputMapping);
_simulationNode = A.Fake <ITreeNode>();
A.CallTo(() => _treeNodeFactory.CreateFor(_simulation)).Returns(_simulationNode);
_simulationSelectionPresenter = A.Fake <ISelectionSimulationPresenter>();
A.CallTo(() => _applicationController.Start <ISelectionSimulationPresenter>()).Returns(_simulationSelectionPresenter);
sut.EditParameterIdentification(_parameterIdentification);
}
protected override void Context()
{
_projectRetriever = A.Fake <IProjectRetriever>();
_view = A.Fake <IBuildingBlockExplorerView>();
A.CallTo(() => _view.TreeView).Returns(A.Fake <IUxTreeView>());
_context = A.Fake <IMoBiContext>();
_regionResolver = A.Fake <IRegionResolver>();
_treeNodeFactory = A.Fake <ITreeNodeFactory>();
_viewItemContextMenuFactory = A.Fake <IViewItemContextMenuFactory>();
_classificationPresenter = A.Fake <IClassificationPresenter>();
_toolTipPartCreator = A.Fake <IToolTipPartCreator>();
_observedDataInExplorerPresenter = A.Fake <IObservedDataInExplorerPresenter>();
_multipleTreeNodeContextMenuFactory = A.Fake <IMultipleTreeNodeContextMenuFactory>();
_editBuildingBlockStarter = A.Fake <IEditBuildingBlockStarter>();
sut = new BuildingBlockExplorerPresenter(_view, _regionResolver, _treeNodeFactory, _viewItemContextMenuFactory, _context,
_classificationPresenter, _toolTipPartCreator, _observedDataInExplorerPresenter, _multipleTreeNodeContextMenuFactory, _projectRetriever, _editBuildingBlockStarter);
_nodeSpatialStructureFolder = setupNode(MoBiRootNodeTypes.SpatialStructureFolder);
_nodeMoleculeFolder = setupNode(MoBiRootNodeTypes.MoleculeFolder);
_nodeReactionFolder = setupNode(MoBiRootNodeTypes.ReactionFolder);
_nodePassiveTransportFolder = setupNode(MoBiRootNodeTypes.PassiveTransportFolder);
_nodeObserverFolder = setupNode(MoBiRootNodeTypes.ObserverFolder);
_nodeEventFolder = setupNode(MoBiRootNodeTypes.EventFolder);
_nodeSimulationSettingsFolder = setupNode(MoBiRootNodeTypes.SimulationSettingsFolder);
_nodeMoleculeStartValuesFolder = setupNode(MoBiRootNodeTypes.MoleculeStartValuesFolder);
_nodeParameterStartValuesFolder = setupNode(MoBiRootNodeTypes.ParameterStartValuesFolder);
_nodeObservedDataFolder = setupNode(RootNodeTypes.ObservedDataFolder);
}
protected ExplorerPresenter(TView view, IRegionResolver regionResolver, ITreeNodeFactory treeNodeFactory, IViewItemContextMenuFactory viewItemContextMenuFactory, IMoBiContext context, RegionName regionName, IClassificationPresenter classificationPresenter, IToolTipPartCreator toolTipPartCreator, IMultipleTreeNodeContextMenuFactory multipleTreeNodeContextMenuFactory, IProjectRetriever projectRetriever)
: base(view, regionResolver, classificationPresenter, toolTipPartCreator, regionName, projectRetriever)
{
_treeNodeFactory = treeNodeFactory;
_viewItemContextMenuFactory = viewItemContextMenuFactory;
_context = context;
_multipleTreeNodeContextMenuFactory = multipleTreeNodeContextMenuFactory;
}
public SimulationExplorerPresenter(ISimulationExplorerView view, ITreeNodeFactory treeNodeFactory, ITreeNodeContextMenuFactory treeNodeContextMenuFactory,
IMultipleTreeNodeContextMenuFactory multipleTreeNodeContextMenuFactory, IBuildingBlockIconRetriever buildingBlockIconRetriever,
IRegionResolver regionResolver, IBuildingBlockTask buildingBlockTask, IBuildingBlockInSimulationManager buildingBlockInSimulationManager,
IToolTipPartCreator toolTipPartCreator, IProjectRetriever projectRetriever, IClassificationPresenter classificationPresenter, IParameterAnalysablesInExplorerPresenter parameterAnalysablesInExplorerPresenter, IObservedDataInSimulationManager observedDataInSimulationManager) :
base(view, treeNodeFactory, treeNodeContextMenuFactory, multipleTreeNodeContextMenuFactory, buildingBlockIconRetriever, regionResolver, buildingBlockTask, RegionNames.SimulationExplorer, projectRetriever, classificationPresenter, toolTipPartCreator)
{
_buildingBlockInSimulationManager = buildingBlockInSimulationManager;
_parameterAnalysablesInExplorerPresenter = parameterAnalysablesInExplorerPresenter;
_observedDataInSimulationManager = observedDataInSimulationManager;
_parameterAnalysablesInExplorerPresenter.InitializeWith(this, classificationPresenter);
}
public SimulationExplorerPresenter(ISimulationExplorerView view, IRegionResolver regionResolver, ITreeNodeFactory treeNodeFactory, IViewItemContextMenuFactory viewItemContextMenuFactory,
IMoBiContext context, IClassificationPresenter classificationPresenter,
IToolTipPartCreator toolTipPartCreator, IMultipleTreeNodeContextMenuFactory multipleTreeNodeContextMenuFactory,
IProjectRetriever projectRetriever, IInteractionTasksForSimulation interactionTasksForSimulation, IParameterAnalysablesInExplorerPresenter parameterAnalysablesInExplorerPresenter) :
base(view, regionResolver, treeNodeFactory, viewItemContextMenuFactory, context, RegionNames.SimulationExplorer,
classificationPresenter, toolTipPartCreator, multipleTreeNodeContextMenuFactory, projectRetriever)
{
_interactionTasksForSimulation = interactionTasksForSimulation;
_parameterAnalysablesInExplorerPresenter = parameterAnalysablesInExplorerPresenter;
_parameterAnalysablesInExplorerPresenter.InitializeWith(this, classificationPresenter);
}
public BuildingBlockExplorerPresenter(IBuildingBlockExplorerView view, IRegionResolver regionResolver, ITreeNodeFactory treeNodeFactory,
IViewItemContextMenuFactory viewItemContextMenuFactory, IMoBiContext context, IClassificationPresenter classificationPresenter,
IToolTipPartCreator toolTipPartCreator, IObservedDataInExplorerPresenter observedDataInExplorerPresenter,
IMultipleTreeNodeContextMenuFactory multipleTreeNodeContextMenuFactory, IProjectRetriever projectRetriever, IEditBuildingBlockStarter editBuildingBlockStarter)
: base(view, regionResolver, treeNodeFactory, viewItemContextMenuFactory, context, RegionNames.BuildingBlockExplorer,
classificationPresenter, toolTipPartCreator, multipleTreeNodeContextMenuFactory, projectRetriever)
{
_observedDataInExplorerPresenter = observedDataInExplorerPresenter;
_editBuildingBlockStarter = editBuildingBlockStarter;
_observedDataInExplorerPresenter.InitializeWith(this, classificationPresenter, RootNodeTypes.ObservedDataFolder);
}
protected ExplorerPresenter(TView view, ITreeNodeFactory treeNodeFactory, ITreeNodeContextMenuFactory treeNodeContextMenuFactory,
IMultipleTreeNodeContextMenuFactory multipleTreeNodeContextMenuFactory,
IBuildingBlockIconRetriever buildingBlockIconRetriever, IRegionResolver regionResolver, IBuildingBlockTask buildingBlockTask, RegionName regionName,
IProjectRetriever projectRetriever, IClassificationPresenter classificationPresenter, IToolTipPartCreator toolTipPartCreator) :
base(view, regionResolver, classificationPresenter, toolTipPartCreator, regionName, projectRetriever)
{
_treeNodeFactory = treeNodeFactory;
_treeNodeContextMenuFactory = treeNodeContextMenuFactory;
_multipleTreeNodeContextMenuFactory = multipleTreeNodeContextMenuFactory;
_buildingBlockIconRetriever = buildingBlockIconRetriever;
_buildingBlockTask = buildingBlockTask;
}
public ParameterIdentificationSimulationSelectionPresenter(IParameterIdentificationSimulationSelectionView view, ITreeNodeFactory treeNodeFactory,
IApplicationController applicationController, ILazyLoadTask lazyLoadTask, ITreeNodeContextMenuFactory treeNodeContextMenuFactory,
IMultipleTreeNodeContextMenuFactory multipleTreeNodeContextMenuFactory, IDialogCreator dialogCreator, IParameterIdentificationTask parameterIdentificationTask) : base(view)
{
_treeNodeFactory = treeNodeFactory;
_applicationController = applicationController;
_lazyLoadTask = lazyLoadTask;
_treeNodeContextMenuFactory = treeNodeContextMenuFactory;
_multipleTreeNodeContextMenuFactory = multipleTreeNodeContextMenuFactory;
_dialogCreator = dialogCreator;
_parameterIdentificationTask = parameterIdentificationTask;
}
protected override void Context()
{
_projectRetriever = A.Fake <IProjectRetriever>();
_view = A.Fake <ISimulationExplorerView>();
_regionResolver = A.Fake <IRegionResolver>();
_treeNodeFactory = A.Fake <ITreeNodeFactory>();
_viewItemContextMenuFactory = A.Fake <IViewItemContextMenuFactory>();
_context = A.Fake <IMoBiContext>();
_classificationPresenter = A.Fake <IClassificationPresenter>();
_toolTipPartCreator = A.Fake <IToolTipPartCreator>();
_multipleTreeNodeContextMenuFactory = A.Fake <IMultipleTreeNodeContextMenuFactory>();
_interactionTaskForSimulation = A.Fake <IInteractionTasksForSimulation>();
_parameterAnalysablesInExplorerPresenter = A.Fake <IParameterAnalysablesInExplorerPresenter>();
sut = new SimulationExplorerPresenter(_view, _regionResolver, _treeNodeFactory, _viewItemContextMenuFactory, _context,
_classificationPresenter, _toolTipPartCreator, _multipleTreeNodeContextMenuFactory, _projectRetriever, _interactionTaskForSimulation, _parameterAnalysablesInExplorerPresenter);
}
protected override void Context()
{
_buildingBlockIconRetriever = A.Fake <IBuildingBlockIconRetriever>();
_view = A.Fake <ISimulationExplorerView>();
A.CallTo(() => _view.TreeView).Returns(A.Fake <IUxTreeView>());
_treeNodeFactory = A.Fake <ITreeNodeFactory>();
_contextMenuFactory = A.Fake <ITreeNodeContextMenuFactory>();
_regionResolver = A.Fake <IRegionResolver>();
_buildingBlockInSimulationManager = A.Fake <IBuildingBlockInSimulationManager>();
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_toolTipNodeCreator = A.Fake <IToolTipPartCreator>();
_projectRetriever = A.Fake <IProjectRetriever>();
_multipleTreeNodeContextMenuFactory = A.Fake <IMultipleTreeNodeContextMenuFactory>();
_parameterAnalysablesInExplorerPresenter = A.Fake <IParameterAnalysablesInExplorerPresenter>();
_simulationComparisonTask = A.Fake <ISimulationComparisonTask>();
_simulationFolderNode = new RootNode(RootNodeTypes.SimulationFolder);
_comparisonFolderNode = new RootNode(RootNodeTypes.ComparisonFolder);
_project = new PKSimProject();
_usedObservedData = new UsedObservedData {
Id = "UsedData"
};
_simulation = new IndividualSimulation().WithName("individualSimulation").WithId("individualSimulation");
_populationSimulation = new PopulationSimulation().WithName("populationSimulation").WithId("populationSimulation");
_importedSimulaton = A.Fake <Simulation>().WithName("ImportedSimulation").WithId("ImportedSimulation");
A.CallTo(() => _importedSimulaton.IsImported).Returns(true);
_simulation.Properties = new SimulationProperties();
_simulation.ModelProperties = new ModelProperties();
_simulation.ModelConfiguration = A.Fake <ModelConfiguration>();
_populationSimulation.Properties = new SimulationProperties();
_populationSimulation.ModelProperties = new ModelProperties();
_populationSimulation.ModelConfiguration = A.Fake <ModelConfiguration>();
_classificationPresenter = A.Fake <IClassificationPresenter>();
_project.AddBuildingBlock(_simulation);
_project.AddBuildingBlock(_populationSimulation);
var classifiableIndividualSimulation = new ClassifiableSimulation {
Subject = _simulation
};
var classfiablePopulationSimulation = new ClassifiableSimulation {
Subject = _populationSimulation
};
var classifiableImportSimulation = new ClassifiableSimulation {
Subject = _importedSimulaton
};
_project.AddClassifiable(classifiableIndividualSimulation);
_project.AddClassifiable(classfiablePopulationSimulation);
_individualSimulationNode = new SimulationNode(classifiableIndividualSimulation);
_populationSimulationNode = new SimulationNode(classfiablePopulationSimulation);
_importedSimulationNode = new SimulationNode(classifiableImportSimulation);
_usedObservedDataNode = A.Fake <ITreeNode>();
A.CallTo(() => _treeNodeFactory.CreateFor(classifiableIndividualSimulation)).Returns(_individualSimulationNode);
A.CallTo(() => _treeNodeFactory.CreateFor(classfiablePopulationSimulation)).Returns(_populationSimulationNode);
A.CallTo(() => _treeNodeFactory.CreateFor(classifiableImportSimulation)).Returns(_importedSimulationNode);
A.CallTo(() => _treeNodeFactory.CreateFor(_usedObservedData)).Returns(_usedObservedDataNode);
_project.AddBuildingBlock(_importedSimulaton);
var simulationComparison = A.Fake <ISimulationComparison>().WithId("SimComp_Id");
var classifiableComparison = new ClassifiableComparison {
Subject = simulationComparison
};
_comparisonNode = new ComparisonNode(classifiableComparison);
_project.AddSimulationComparison(simulationComparison);
A.CallTo(() => _treeNodeFactory.CreateFor(classifiableComparison)).Returns(_comparisonNode);
_usedCompoundBuildingBlock = new UsedBuildingBlock("toto", PKSimBuildingBlockType.Compound)
{
Id = "usedBB"
};
_simulation.AddUsedBuildingBlock(_usedCompoundBuildingBlock);
_simulation.AddUsedObservedData(_usedObservedData);
_project.AddClassifiable(classifiableComparison);
_templageCompoundBuildingBlock = A.Fake <IPKSimBuildingBlock>();
_usedBuildingBlockNode = new UsedBuildingBlockInSimulationNode(_simulation, _usedCompoundBuildingBlock, _templageCompoundBuildingBlock);
A.CallTo(() => _treeNodeFactory.CreateFor(_simulation, _usedCompoundBuildingBlock)).Returns(_usedBuildingBlockNode);
A.CallTo(() => _buildingBlockIconRetriever.IconFor(_simulation)).Returns(ApplicationIcons.SimulationGreen);
A.CallTo(() => _buildingBlockIconRetriever.IconFor(_populationSimulation)).Returns(ApplicationIcons.SimulationGreen);
A.CallTo(() => _buildingBlockIconRetriever.IconFor(_usedCompoundBuildingBlock)).Returns(ApplicationIcons.CompoundRed);
A.CallTo(() => _view.TreeView.NodeById(_simulation.Id)).Returns(_individualSimulationNode);
A.CallTo(() => _view.TreeView.NodeById(_usedCompoundBuildingBlock.Id)).Returns(_usedBuildingBlockNode);
A.CallTo(() => _view.TreeView.NodeById(RootNodeTypes.SimulationFolder.Id)).Returns(_simulationFolderNode);
A.CallTo(() => _view.TreeView.NodeById(RootNodeTypes.ComparisonFolder.Id)).Returns(_comparisonFolderNode);
_observedDataInSimulationManager = A.Fake <IObservedDataInSimulationManager>();
sut = new SimulationExplorerPresenter(
_view, _treeNodeFactory, _contextMenuFactory,
_multipleTreeNodeContextMenuFactory, _buildingBlockIconRetriever,
_regionResolver, _buildingBlockTask, _buildingBlockInSimulationManager,
_toolTipNodeCreator, _projectRetriever, _classificationPresenter,
_parameterAnalysablesInExplorerPresenter, _observedDataInSimulationManager, _simulationComparisonTask);
A.CallTo(() => _projectRetriever.CurrentProject).Returns(_project);
}
protected override void Context()
{
_view = A.Fake <IBuildingBlockExplorerView>();
A.CallTo(() => _view.TreeView).Returns(A.Fake <IUxTreeView>());
_regionResolver = A.Fake <IRegionResolver>();
_region = A.Fake <IRegion>();
A.CallTo(() => _regionResolver.RegionWithName(RegionNames.BuildingBlockExplorer)).Returns(_region);
_project = new PKSimProject();
var compound = new Compound().WithName("compound");
_individual = new Individual().WithName("individual");
_individual.OriginData = new OriginData {
Species = new Species()
};
_project.AddBuildingBlock(_individual);
_project.AddBuildingBlock(compound);
_observedDataInExplorerPresenter = A.Fake <IObservedDataInExplorerPresenter>();
_buildingBlockIconRetriever = A.Fake <IBuildingBlockIconRetriever>();
_treeNodeFactory = A.Fake <ITreeNodeFactory>();
_contextMenuFactory = A.Fake <ITreeNodeContextMenuFactory>();
_buildingBlockTask = A.Fake <IBuildingBlockTask>();
_toolTipCreator = A.Fake <IToolTipPartCreator>();
_projectRetriever = A.Fake <IProjectRetriever>();
_classificationPresenter = A.Fake <IClassificationPresenter>();
_multipleTreeNodeContextMenuFactory = A.Fake <IMultipleTreeNodeContextMenuFactory>();
sut = new BuildingBlockExplorerPresenter(_view, _treeNodeFactory, _contextMenuFactory, _multipleTreeNodeContextMenuFactory, _buildingBlockIconRetriever, _regionResolver,
_buildingBlockTask, _toolTipCreator, _projectRetriever, _classificationPresenter, _observedDataInExplorerPresenter);
_compoundFolderNode = new RootNode(PKSimRootNodeTypes.CompoundFolder);
_individualFolderNode = new RootNode(PKSimRootNodeTypes.IndividualFolder);
_formulationFolderNode = new RootNode(PKSimRootNodeTypes.FormulationFolder);
_protocolFolderNode = new RootNode(PKSimRootNodeTypes.ProtocolFolder);
_observersFolderNode = new RootNode(PKSimRootNodeTypes.ObserverSetFolder);
_populationFolderNode = new RootNode(PKSimRootNodeTypes.PopulationFolder);
_eventRootNode = new RootNode(PKSimRootNodeTypes.EventFolder);
_simulationNode = new SimulationNode(new ClassifiableSimulation {
Subject = new IndividualSimulation {
Id = "1"
}
});
_compoundNode = new ObjectWithIdAndNameNode <Compound>(compound);
_individualNode = new ObjectWithIdAndNameNode <Individual>(_individual);
_observationRootNode = new RootNode(RootNodeTypes.ObservedDataFolder);
A.CallTo(() => _treeNodeFactory.CreateFor(PKSimRootNodeTypes.CompoundFolder)).Returns(_compoundFolderNode);
A.CallTo(() => _treeNodeFactory.CreateFor(PKSimRootNodeTypes.IndividualFolder)).Returns(_individualFolderNode);
A.CallTo(() => _treeNodeFactory.CreateFor(PKSimRootNodeTypes.ProtocolFolder)).Returns(_protocolFolderNode);
A.CallTo(() => _treeNodeFactory.CreateFor(PKSimRootNodeTypes.ObserverSetFolder)).Returns(_observersFolderNode);
A.CallTo(() => _treeNodeFactory.CreateFor(PKSimRootNodeTypes.FormulationFolder)).Returns(_formulationFolderNode);
A.CallTo(() => _treeNodeFactory.CreateFor(PKSimRootNodeTypes.PopulationFolder)).Returns(_populationFolderNode);
A.CallTo(() => _treeNodeFactory.CreateFor(RootNodeTypes.ObservedDataFolder)).Returns(_observationRootNode);
A.CallTo(() => _treeNodeFactory.CreateFor(PKSimRootNodeTypes.EventFolder)).Returns(_eventRootNode);
A.CallTo(() => _treeNodeFactory.CreateFor(_individual)).Returns(_individualNode);
A.CallTo(() => _treeNodeFactory.CreateFor(compound)).Returns(_compoundNode);
A.CallTo(() => _view.TreeView.NodeById(PKSimRootNodeTypes.CompoundFolder.Id)).Returns(_compoundFolderNode);
A.CallTo(() => _view.TreeView.NodeById(PKSimRootNodeTypes.IndividualFolder.Id)).Returns(_individualFolderNode);
A.CallTo(() => _view.TreeView.NodeById(PKSimRootNodeTypes.ProtocolFolder.Id)).Returns(_protocolFolderNode);
A.CallTo(() => _view.TreeView.NodeById(PKSimRootNodeTypes.ObserverSetFolder.Id)).Returns(_observersFolderNode);
A.CallTo(() => _view.TreeView.NodeById(PKSimRootNodeTypes.FormulationFolder.Id)).Returns(_formulationFolderNode);
A.CallTo(() => _view.TreeView.NodeById(PKSimRootNodeTypes.PopulationFolder.Id)).Returns(_populationFolderNode);
A.CallTo(() => _view.TreeView.NodeById(RootNodeTypes.ObservedDataFolder.Id)).Returns(_observationRootNode);
A.CallTo(() => _view.TreeView.NodeById(PKSimRootNodeTypes.EventFolder.Id)).Returns(_eventRootNode);
A.CallTo(() => _view.AddNode(A <ITreeNode> ._)).ReturnsLazily(s => s.Arguments[0].DowncastTo <ITreeNode>());
}
public BuildingBlockExplorerPresenter(IBuildingBlockExplorerView view, ITreeNodeFactory treeNodeFactory, ITreeNodeContextMenuFactory treeNodeContextMenuFactory, IMultipleTreeNodeContextMenuFactory multipleTreeNodeContextMenuFactory, IBuildingBlockIconRetriever buildingBlockIconRetriever,
IRegionResolver regionResolver, IBuildingBlockTask buildingBlockTask, IToolTipPartCreator toolTipPartCreator, IProjectRetriever projectRetriever, IClassificationPresenter classificationPresenter, IObservedDataInExplorerPresenter observedDataInExplorerPresenter)
: base(view, treeNodeFactory, treeNodeContextMenuFactory, multipleTreeNodeContextMenuFactory, buildingBlockIconRetriever, regionResolver, buildingBlockTask, RegionNames.BuildingBlockExplorer, projectRetriever, classificationPresenter, toolTipPartCreator)
{
_observedDataInExplorerPresenter = observedDataInExplorerPresenter;
_observedDataInExplorerPresenter.InitializeWith(this, classificationPresenter, RootNodeTypes.ObservedDataFolder);
}
