public override async Task <IndividualMolecule> MapToModel(Molecule snapshot, ModelIndividual individual)
{
var molecule = createMoleculeFrom(snapshot, individual);
MapSnapshotPropertiesToModel(snapshot, molecule);
//This call should happen before updating parameters from snapshot to ensure that default molecule
//parameters that were updated by the user are taking precedence.
_moleculeExpressionTask.SetDefaulMoleculeParameters(molecule);
await UpdateParametersFromSnapshot(snapshot, molecule, snapshot.Type.ToString());
updateMoleculePropertiesToMolecule(molecule, snapshot);
var ontogeny = await _ontogenyMapper.MapToModel(snapshot.Ontogeny, individual);
_ontogenyTask.SetOntogenyForMolecule(molecule, ontogeny, individual);
await updateExpression(snapshot, new ExpressionContainerMapperContext { Molecule = molecule, SimulationSubject = individual });
return(molecule);
}
private void setDefaultFor(IndividualMolecule molecule, TSimulationSubject simulationSubject, string moleculeName)
{
setDefaultSettingsForTransporter(molecule, simulationSubject, moleculeName);
setDefaultOntogeny(molecule, simulationSubject, moleculeName);
_moleculeParameterTask.SetDefaulMoleculeParameters(molecule, moleculeName);
}
