public ActionResult CreateBamFile(BamSlicingParams pars)
{
Response.BufferOutput = false;
Response.ContentType = "application/octet-stream";
var _extension = pars.SamOutput ? "sam" : "bam";
Response.AddHeader("Content-Disposition", "attachment; filename=" + pars.ReadsetName + "_CHR"
+ pars.ChrNum + "_" + pars.ChrStartPos + "_" + pars.ChrEndPos + "." + _extension);
serverWorker.WriteReads(pars.ReadsetId, pars.ChrNum, pars.ChrStartPos, pars.ChrEndPos,
delegate(IList <Read> list)
{
new SamBamWriter(pars.SamOutput).Write(list, Response.OutputStream);
Response.OutputStream.Flush();
});
return(null);
}
public void WriteReads(string readsetId, string chr, ulong pos1, ulong pos2, Action <IList <Read> > s)
{
impl.WriteReads(readsetId, chr, pos1, pos2, s);
}