/// <summary>
/// Implementation for SaveCommand.
/// Validates all settings and saves them.
/// </summary>
private void SaveImplementation()
{
if (this.PointsToSmooth != 0 && (this.PointsToSmooth % 2 == 0 || this.PointsToSmooth < 3))
{
this.dialogService.MessageBox("Points To Smooth must be an odd number of at least 3. 0 = No smoothing.");
return;
}
if (this.ExportImageDpi < 1)
{
this.dialogService.MessageBox("Export Image DPI must be at least 1.");
return;
}
IcParameters.Instance.PrecursorTolerancePpm = new Tolerance(this.PrecursorIonTolerance, this.PrecursorIonToleranceUnit);
IcParameters.Instance.ProductIonTolerancePpm = new Tolerance(this.ProductIonTolerance, this.ProductIonToleranceUnit);
IcParameters.Instance.IonCorrelationThreshold = this.IonCorrelationThreshold;
IcParameters.Instance.PointsToSmooth = this.PointsToSmooth;
IcParameters.Instance.PrecursorRelativeIntensityThreshold = this.PrecursorRelativeIntensityThreshold;
IcParameters.Instance.ShowInstrumentData = this.ShowInstrumentData;
IcParameters.Instance.AutomaticallySelectIonTypes = this.AutomaticallySelectIonTypes;
IcParameters.Instance.CidHcdIonTypes = IcParameters.IonTypeStringParse(this.CidHcdIonTypes);
IcParameters.Instance.EtdIonTypes = IcParameters.IonTypeStringParse(this.EtdIonTypes);
IcParameters.Instance.ExportImageDpi = this.ExportImageDpi;
IcParameters.Instance.FeatureColors = this.FeatureColors.GetOxyColors();
IcParameters.Instance.IdColors = this.IdColors.GetOxyColors();
IcParameters.Instance.Ms2ScanColor = this.Ms2ScanColor.ToOxyColor();
var modificationList = this.Modifications.Select(searchModificationVm => searchModificationVm.SearchModification)
.Where(searchModification => searchModification != null).ToList();
IcParameters.Instance.SearchModifications = modificationList;
HeavyModificationsViewModel.Save();
IcParameters.Instance.Update();
this.Status = true;
if (this.ReadyToClose != null)
{
this.ReadyToClose(this, null);
}
}
/// <summary>
/// Initializes a new instance of the <see cref="SettingsViewModel"/> class.
/// </summary>
/// <param name="dialogService">Dialog service for opening dialogs from a view model.</param>
public SettingsViewModel(IMainDialogService dialogService)
{
this.dialogService = dialogService;
this.ToleranceUnits = new ReactiveList <ToleranceUnit> {
ToleranceUnit.Ppm, ToleranceUnit.Th
};
this.PrecursorIonTolerance = IcParameters.Instance.PrecursorTolerancePpm.GetValue();
this.PrecursorIonToleranceUnit = IcParameters.Instance.PrecursorTolerancePpm.GetUnit();
this.ProductIonTolerance = IcParameters.Instance.ProductIonTolerancePpm.GetValue();
this.ProductIonToleranceUnit = IcParameters.Instance.ProductIonTolerancePpm.GetUnit();
this.IonCorrelationThreshold = IcParameters.Instance.IonCorrelationThreshold;
this.PointsToSmooth = IcParameters.Instance.PointsToSmooth;
this.PrecursorRelativeIntensityThreshold = IcParameters.Instance.PrecursorRelativeIntensityThreshold;
this.ShowInstrumentData = IcParameters.Instance.ShowInstrumentData;
this.AutomaticallySelectIonTypes = IcParameters.Instance.AutomaticallySelectIonTypes;
this.CidHcdIonTypes = IcParameters.Instance.GetCidHcdIonTypes();
this.EtdIonTypes = IcParameters.Instance.GetEtdIonTypes();
this.ExportImageDpi = IcParameters.Instance.ExportImageDpi;
this.FeatureColors = new ColorListViewModel();
this.IdColors = new ColorListViewModel();
var oxyScanCol = IcParameters.Instance.Ms2ScanColor;
this.Ms2ScanColor = new Color {
A = oxyScanCol.A, R = oxyScanCol.R, G = oxyScanCol.G, B = oxyScanCol.B
};
foreach (var color in IcParameters.Instance.FeatureColors)
{
this.FeatureColors.ColorViewModels.Add(new ColorViewModel {
SelectedColor = new Color {
A = color.A, R = color.R, B = color.B, G = color.G
}
});
}
foreach (var color in IcParameters.Instance.IdColors)
{
this.IdColors.ColorViewModels.Add(new ColorViewModel {
SelectedColor = new Color {
A = color.A, R = color.R, B = color.B, G = color.G
}
});
}
this.Modifications = new ReactiveList <SearchModificationViewModel>();
foreach (var searchModification in IcParameters.Instance.SearchModifications)
{
var modificationVm = new SearchModificationViewModel(searchModification, this.dialogService);
////modificationVm.RemoveModificationCommand.Subscribe(_ => this.RemoveModification(modificationVm));
this.Modifications.Add(modificationVm);
}
var addModificationCommand = ReactiveCommand.Create();
addModificationCommand.Subscribe(_ => this.AddModificationImplementation());
this.AddModificationCommand = addModificationCommand;
var createNewModificationCommand = ReactiveCommand.Create();
createNewModificationCommand.Subscribe(_ => this.CreateNewModificationImplementation());
this.CreateNewModificationCommand = createNewModificationCommand;
var saveCommand = ReactiveCommand.Create();
saveCommand.Subscribe(_ => this.SaveImplementation());
this.SaveCommand = saveCommand;
var cancelCommand = ReactiveCommand.Create();
cancelCommand.Subscribe(_ => this.CancelImplementation());
this.CancelCommand = cancelCommand;
HeavyModificationsViewModel = new HeavyModificationsViewModel(dialogService);
this.Status = false;
}
