Exemple #1
0
        private object GetAttributeValue(int _h5FileId, string attributeName)
        {
            H5AttributeId attId = H5A.open(_h5FileId, attributeName);

            if (attId == 0)
            {
                return(null);
            }
            H5DataTypeId typeId = 0;
            H5DataTypeId dtId   = 0;

            H5A.info_t    attInfo   = new H5A.info_t();
            H5DataSpaceId spaceId   = 0;
            H5DataTypeId  oldTypeId = 0;
            object        retObject = null;

            try
            {
                typeId = H5A.get_type(attId);
                H5A.get_info(attId, ref attInfo);
                dtId    = H5A.get_type(attId);
                spaceId = H5A.get_space(attId);
                IntPtr dataSize = H5T.get_size(dtId);
                //
                oldTypeId = typeId;
                typeId    = H5T.get_native_type(typeId, H5T.direction_t.DEFAULT);
                H5T.class_t typeClass = H5T.get_class(typeId);
                int         ndims     = H5S.get_simple_extent_ndims(spaceId);
                ulong[]     dims      = new ulong[ndims];
                H5S.get_simple_extent_dims(spaceId, dims, null);
                ulong dimSize = 1;
                if (dims.Length == 0)
                {
                    dimSize = 1;
                }
                else
                {
                    foreach (ulong dim in dims)
                    {
                        dimSize *= dim;
                    }
                }
                switch (typeClass)
                {
                case H5T.class_t.NO_CLASS:
                    break;

                case H5T.class_t.INTEGER:
                    // H5T.Sign.TWOS_COMPLEMENT;
                    H5T.sign_t sign = H5T.get_sign(oldTypeId);
                    switch (dataSize.ToInt32())
                    {
                    case 1:
                        retObject = ReadArray <byte>(dimSize, attId, typeId);
                        break;

                    case 2:
                        switch (sign)
                        {
                        case H5T.sign_t.SGN_2:
                            retObject = ReadArray <Int16>(dimSize, attId, typeId);
                            break;

                        case H5T.sign_t.NONE:
                            retObject = ReadArray <UInt16>(dimSize, attId, typeId);
                            break;
                        }
                        break;

                    case 4:
                        switch (sign)
                        {
                        case H5T.sign_t.SGN_2:
                            retObject = ReadArray <Int32>(dimSize, attId, typeId);
                            break;

                        case H5T.sign_t.NONE:
                            retObject = ReadArray <UInt32>(dimSize, attId, typeId);
                            break;
                        }
                        break;

                    case 8:
                        switch (sign)
                        {
                        case H5T.sign_t.SGN_2:
                            retObject = ReadArray <Int64>(dimSize, attId, typeId);
                            break;

                        case H5T.sign_t.NONE:
                            retObject = ReadArray <UInt64>(dimSize, attId, typeId);
                            break;
                        }
                        break;
                    }
                    break;

                case H5T.class_t.FLOAT:
                    switch (dataSize.ToInt32())
                    {
                    case 4:
                        retObject = ReadArray <float>(dimSize, attId, typeId);
                        break;

                    case 8:
                        retObject = ReadArray <double>(dimSize, attId, typeId);
                        break;
                    }
                    break;

                case H5T.class_t.STRING:
                    ulong  size  = attInfo.data_size;
                    byte[] chars = ReadArray <byte>(size, attId, typeId);
                    retObject = Encoding.ASCII.GetString(chars);
                    break;

                default:
                    break;
                }
                return(retObject);
            }
            finally
            {
                if (spaceId != 0)
                {
                    H5S.close(spaceId);
                }
                if (attId != 0)
                {
                    H5A.close(attId);
                }
                if (oldTypeId != 0)
                {
                    H5T.close(oldTypeId);
                }
                if (typeId != 0)
                {
                    H5T.close(typeId);
                }
                if (dtId != 0)
                {
                    H5T.close(dtId);
                }
            }
        }
Exemple #2
0
        private string ReadBuffer(byte[] buffer, int offset, H5T.class_t typeClass, int typeId)
        {
            string result   = string.Empty;
            IntPtr dataSize = H5T.get_size(typeId);

            H5T.order_t order = H5T.get_order(typeId);
            byte[]      temp  = new byte[dataSize.ToInt32()];

            Array.Copy(buffer, offset, temp, 0, dataSize.ToInt32());
            if (order == H5T.order_t.BE && typeClass != H5T.class_t.STRING)
            {
                Array.Reverse(temp);
            }
            switch (typeClass)
            {
            case H5T.class_t.NO_CLASS:
                break;

            case H5T.class_t.INTEGER:
                // H5T.Sign.TWOS_COMPLEMENT;
                H5T.sign_t sign = H5T.get_sign(typeId);

                switch (dataSize.ToInt32())
                {
                case 1:
                    result = ((double)BitConverter.ToChar(temp, 0)).ToString("G");
                    break;

                case 2:
                    switch (sign)
                    {
                    case H5T.sign_t.SGN_2:
                        result = ((double)BitConverter.ToInt16(temp, 0)).ToString("G");
                        break;

                    case H5T.sign_t.NONE:
                        result = ((double)BitConverter.ToUInt16(temp, 0)).ToString("G");
                        break;
                    }
                    break;

                case 4:
                    switch (sign)
                    {
                    case H5T.sign_t.SGN_2:
                        result = ((double)BitConverter.ToInt32(temp, 0)).ToString("G");
                        break;

                    case H5T.sign_t.NONE:
                        result = ((double)BitConverter.ToUInt32(temp, 0)).ToString("G");
                        break;
                    }
                    break;

                case 8:
                    switch (sign)
                    {
                    case H5T.sign_t.SGN_2:
                        result = ((double)BitConverter.ToInt64(temp, 0)).ToString("G");
                        break;

                    case H5T.sign_t.NONE:
                        result = ((double)BitConverter.ToUInt64(temp, 0)).ToString("G");
                        break;
                    }
                    break;
                }
                break;

            case H5T.class_t.FLOAT:
                switch (dataSize.ToInt32())
                {
                case 4:
                {
                    result = BitConverter.ToSingle(temp, 0).ToString("G");
                    break;
                }

                case 8:
                {
                    result = BitConverter.ToDouble(temp, 0).ToString("G");
                    break;
                }
                }
                break;

            case H5T.class_t.STRING:
            {
                GCHandle handler = GCHandle.Alloc(temp, GCHandleType.Pinned);
                var      str     = Marshal.PtrToStringAnsi(handler.AddrOfPinnedObject());
                handler.Free();
                result = str;
                break;
            }

            default:
                break;
            }
            return(result);
        }
Exemple #3
0
        public static Hdf5DataType GetDataTypeByType(Hdf5Identifier _typeId)
        {
            var typeClass = H5T.get_class(_typeId.Value);
            var typeSize  = (int)H5T.get_size(_typeId.Value);
            var typeSign  = H5T.get_sign(_typeId.Value);
            var typeOrder = H5T.get_order(_typeId.Value);

            Hdf5DataType dt = new Hdf5DataType
            {
                Id   = _typeId,
                Size = typeSize,
            };

            if (typeOrder == H5T.order_t.BE)
            {
                dt.ByteOrder = Hdf5ByteOrder.BigEndian;
            }
            else if (typeOrder == H5T.order_t.LE)
            {
                dt.ByteOrder = Hdf5ByteOrder.LittleEndian;
            }
            else if (typeOrder == H5T.order_t.ONE)
            {
                dt.ByteOrder = Hdf5ByteOrder.None;
            }

            if (typeClass == H5T.class_t.INTEGER)
            {
                if (typeSign == H5T.sign_t.NONE)
                {
                    if (typeSize == 1)
                    {
                        dt.Type       = Hdf5DataTypes.UInt8;
                        dt.NativeType = H5T.NATIVE_UINT8.ToId();
                    }
                    else if (typeSize == 2)
                    {
                        dt.Type       = Hdf5DataTypes.UInt16;
                        dt.NativeType = H5T.NATIVE_UINT16.ToId();
                    }
                    else if (typeSize == 4)
                    {
                        dt.Type       = Hdf5DataTypes.UInt32;
                        dt.NativeType = H5T.NATIVE_UINT32.ToId();
                    }
                    else if (typeSize == 8)
                    {
                        dt.Type       = Hdf5DataTypes.UInt64;
                        dt.NativeType = H5T.NATIVE_UINT64.ToId();
                    }
                }
                else
                {
                    if (typeSize == 1)
                    {
                        dt.Type       = Hdf5DataTypes.Int8;
                        dt.NativeType = H5T.NATIVE_INT8.ToId();
                    }
                    else if (typeSize == 2)
                    {
                        dt.Type       = Hdf5DataTypes.Int16;
                        dt.NativeType = H5T.NATIVE_INT16.ToId();
                    }
                    else if (typeSize == 4)
                    {
                        dt.Type       = Hdf5DataTypes.Int32;
                        dt.NativeType = H5T.NATIVE_INT32.ToId();
                    }
                    else if (typeSize == 8)
                    {
                        dt.Type       = Hdf5DataTypes.Int64;
                        dt.NativeType = H5T.NATIVE_INT64.ToId();
                    }
                }
            }
            else if (typeClass == H5T.class_t.FLOAT)
            {
                if (typeSize == 4)
                {
                    dt.Type       = Hdf5DataTypes.Single;
                    dt.NativeType = H5T.NATIVE_FLOAT.ToId();
                }
                else if (typeSize == 8)
                {
                    dt.Type       = Hdf5DataTypes.Double;
                    dt.NativeType = H5T.NATIVE_DOUBLE.ToId();
                }
            }
            else if (typeClass == H5T.class_t.STRING)
            {
                dt.Type       = Hdf5DataTypes.String;
                dt.NativeType = H5T.C_S1.ToId();
            }

            return(dt);
        }