public async Task <IActionResult> Grid([FromBody] GridAPI Model)
{
if (Model.FirstSequence == null || Model.SecondSequence == null)
{
return(BadRequest());
}
if (!Regex.IsMatch(Model.FirstSequence, @"^[a-zA-Z]+$") || !Regex.IsMatch(Model.FirstSequence, @"^[a-zA-Z]+$"))
{
return(BadRequest());
}
//if (Model.FirstSequence.Length <= 20000 || Model.FirstSequence.Length <= 20000)
// return BadRequest();
// Check for earlier exist
AlignmentJob SeqFound = Repo.AreExist(Model.FirstSequence, Model.SecondSequence, Model.ScoringMatrix, Model.Gap);
if (SeqFound == null) // Means the user didn't submit these sequences before.
{
string AlignmentID = Guid.NewGuid().ToString();
// Storing in the database
await Repo.AddAlignmentJobAsync(new AlignmentJob
{
AlignmentID = AlignmentID,
ScoringMatrix = Model.ScoringMatrix,
Algorithm = "Edge",
FirstSequenceHash = Helper.SHA1HashStringForUTF8String(Model.FirstSequence),
SecondSequenceHash = Helper.SHA1HashStringForUTF8String(Model.SecondSequence),
FirstSequenceName = "Sequence First Name",
SecondSequenceName = "Sequence Second Name",
IsAlignmentCompleted = false,
ByteText = Helper.SetTextGrid(Model.FirstSequence, Model.SecondSequence),
UserFK = (await UserManager.FindByEmailAsync(Model.Email)).Id
});
// Sending to the Grid, that there is a job is required from you
// New up instance of SignalR HubConnection with the URL of the SignalR Server Hosting.
HubConnection connection = new HubConnection(@"http://mtidna.azurewebsites.net");
// Connect to the Grid SignalR Hub.
IHubProxy _hub = connection.CreateHubProxy("GridHub");
// Connecting to the server.
await connection.Start(); // Start the connection
await _hub.Invoke("SendToGrid", Newtonsoft.Json.JsonConvert.SerializeObject(new GridInfo {
AlignmentJobId = AlignmentID, Email = Model.Email
})); // Invoke Alignment SignalR Method, and pass the Job Id to the Grid.
return(Ok("Grid OK"));
}
else
{
if (SeqFound.IsAlignmentCompleted == false)
{
return(Ok("Grid Wait")); // Returning the same Alignment ID
}
else // the grid already alignment them , so no action is required from the grid, the user can download a text file directly.
{
return(Ok("Grid Check History"));
}
}
}
public string PositionToGrid(Vector3 position)
{
if (GridAPI != null)
{
string[] g = (string[])GridAPI.CallHook("GetGrid", position);
return(string.Concat(g));
}
else
{
// From GrTeleport
Vector2 r = new Vector2((World.Size / 2) + position.x, (World.Size / 2) + position.z);
float x = Mathf.Floor(r.x / 146.3f) % 26;
float z = Mathf.Floor(World.Size / 146.3f) - Mathf.Floor(r.y / 146.3f);
return($"{(char)('A' + x)}{z - 1}");
}
}
