Exemple #1
0
        /// <summary>
        /// Issue the second NCBI query to fetch the results.
        /// </summary>
        /// <param name="results">The results of the first query.</param>
        /// <returns>A string containing the results in NCBI text format</returns>
        private string ExecuteFetch(EsearchResults results)
        {
            string sURL = "http://www.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?rettype=" + this.FetchMethod + "&retmode=text&restart=0&db=Pubmed";

            sURL = sURL + ApiKeyParam;
            sURL = sURL + "&retmax=" + results.Count;
            sURL = sURL + "&query_key=" + results.QueryKey;
            sURL = sURL + "&WebEnv=" + results.WebEnv;
            WebRequest request = WebRequest.Create(sURL);

            return(ExecuteWebRequest(request));
        }
Exemple #2
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        /// <summary>
        /// Execute a query against NCBI
        /// This is a virtual function because MockNCBI must override it
        /// </summary>
        /// <param name="query">The query string to search for</param>
        /// <returns>The results of the search in the format specified when the instance was initializd</returns>
        public virtual string Search(string query)
        {
            EsearchResults esearchResults = ExecuteEsearch(query, ApiKeyParam);

            return(ExecuteFetch(esearchResults));
        }