public static DatasetDescription Collect(CustomizationInfo info)
{
DatasetDescription description = new DatasetDescription(
// REQUIRED
name: info.DatasetName)
//BIDSVersion, // set internally in constructor
{
// RECOMMENDED
License = info.License,
// OPTIONAL
Authors = info.Authors,
};
return(description);
}
public void ConvertBrainVisionFilesToBidsFormatFiles()
{
DatasetDescription datasetDescription = DatasetDescriptionConverter.Collect(_info);
string changesFileContent = ChangesConverter.Collect();
string readmeFileContent = string.Empty;
string actualTaskName = _bidsPackage.Task; // may be auto-generated, in this case will differ from info.TaskName
EegSidecar eegSidecar = EegSidecarConverter.Collect(_bvPackage, _info, actualTaskName);
EegChannelCollection? eegChannels = EegChannelsConverter.Collect(_bvPackage);
EegElectrodeCollection?eegElectrodes = EegElectrodesConverter.Collect(_bvPackage);
EegCoordinateSystem? eegCoordinateSystem = eegElectrodes == null ? null : EegCoordinateSystemConverter.Collect(); // if electrodes not present, no sense to create coordinates
TaskEventCollection? taskEvents = TaskEventsConverter.Collect(_bvPackage);
SaveBidsAgnosticFiles(_bidsPackage.RootFolder,
datasetDescription, changesFileContent, readmeFileContent);
SaveBidsEegModalityFiles(_bidsPackage.RootFolder.SubjectFolder.SessionFolder.EegModalityFolder,
eegSidecar, eegChannels, eegElectrodes, eegCoordinateSystem, taskEvents);
}
private void SaveBidsAgnosticFiles(IRootFolder rootFolder, DatasetDescription datasetDescription, string changesFileContent, string readmeFileContent)
{
if (datasetDescription != null)
{
if (File.Exists(rootFolder.DatasetDescriptionFilePath))
{
Warnings.Add($"{WarningFileSkipped}{rootFolder.DatasetDescriptionFilePath}");
}
else
{
rootFolder.SaveDatasetDescriptionFile(datasetDescription);
}
}
if (changesFileContent != null)
{
if (File.Exists(rootFolder.ChangesFilePath))
{
Warnings.Add($"{WarningFileSkipped}{rootFolder.ChangesFilePath}");
}
else
{
rootFolder.SaveChangesFile(changesFileContent);
}
}
if (readmeFileContent != null)
{
if (File.Exists(rootFolder.ReadmeFilePath))
{
Warnings.Add($"{WarningFileSkipped}{rootFolder.ReadmeFilePath}");
}
else
{
rootFolder.SaveReadmeFile(readmeFileContent);
}
}
}
public static void SaveDatasetDescriptionFile(string filePath, DatasetDescription datasetDescription)
{
Directory.CreateDirectory(Path.GetDirectoryName(filePath));
DatasetDescriptionWriter.Save(filePath, datasetDescription);
}
public void SaveDatasetDescriptionFile(DatasetDescription datasetDescription) => SaveDatasetDescriptionFile(DatasetDescriptionFilePath, datasetDescription);
public static void Save(string filePath, DatasetDescription datasetDescription) => JsonWriter.Save(filePath, datasetDescription);
