/// <inheritdoc/>
protected override Act MapToModel(AdverseEvent resource)
{
#if !DEBUG
throw new NotSupportedException();
#endif
var retVal = new Act();
if (!Guid.TryParse(resource.Id, out var key))
{
key = Guid.NewGuid();
}
retVal.ClassConceptKey = ActClassKeys.Act;
// retVal.StatusConceptKey = StatusKeys.Active;
retVal.Key = key;
retVal.MoodConceptKey = ActMoodKeys.Eventoccurrence;
// map identifier to identifiers
retVal.Identifiers.Add(DataTypeConverter.ToActIdentifier(resource.Identifier));
/* retVal.Identifiers = new List<ActIdentifier>
* {
* DataTypeConverter.ToActIdentifier(resource.Identifier)
* };*/
//map category to type concept
retVal.TypeConcept = DataTypeConverter.ToConcept(resource.Category.FirstOrDefault());
// map subject to patient
if (resource.Subject != null)
{
retVal.Participations.Add(resource.Subject.Reference.StartsWith("urn:uuid:") ? new ActParticipation(ActParticipationKey.RecordTarget, Guid.Parse(resource.Subject.Reference.Substring(9))): new ActParticipation(ActParticipationKey.RecordTarget, DataTypeConverter.ResolveEntity <Core.Model.Roles.Patient>(resource.Subject, resource)));
}
// map date element to act time
var occurTime = (DateTimeOffset)DataTypeConverter.ToDateTimeOffset(resource.DateElement);
var targetAct = new CodedObservation()
{
ActTime = occurTime
};
retVal.Relationships.Add(new ActRelationship(ActRelationshipTypeKeys.HasSubject, targetAct));
retVal.ActTime = occurTime;
// map event to relationships
var reactionTarget = new CodedObservation()
{
Value = DataTypeConverter.ToConcept(resource.Event)
};
targetAct.Relationships.Add(new ActRelationship(ActRelationshipTypeKeys.HasManifestation, reactionTarget));
// map location to place
if (resource.Location != null)
{
retVal.Participations.Add(resource.Location.Reference.StartsWith("urn:uuid:") ? new ActParticipation(ActParticipationKey.Location, Guid.Parse(resource.Location.Reference.Substring(9))) : new ActParticipation(ActParticipationKey.Location, DataTypeConverter.ResolveEntity <Core.Model.Entities.Place>(resource.Location, resource)));
// retVal.Participations.Add(new ActParticipation(ActParticipationKey.Location, DataTypeConverter.ResolveEntity<Core.Model.Entities.Place>(resource.Location, resource)));
}
// map seriousness to relationships
if (resource.Severity != null)
{
var severityTarget = new CodedObservation()
{
Value = DataTypeConverter.ToConcept(resource.Severity.Coding.FirstOrDefault(), "http://terminology.hl7.org/CodeSystem/adverse-event-severity"), TypeConceptKey = ObservationTypeKeys.Severity
};
targetAct.Relationships.Add(new ActRelationship(ActRelationshipTypeKeys.HasComponent, severityTarget));
}
// map recoder to provider
if (resource.Recorder != null)
{
retVal.Participations.Add(resource.Recorder.Reference.StartsWith("urn:uuid:") ? new ActParticipation(ActParticipationKey.Authororiginator, Guid.Parse(resource.Recorder.Reference.Substring(9))) : new ActParticipation(ActParticipationKey.Authororiginator, DataTypeConverter.ResolveEntity <Core.Model.Roles.Provider>(resource.Recorder, resource)));
// retVal.Participations.Add(new ActParticipation(ActParticipationKey.Authororiginator, DataTypeConverter.ResolveEntity<Core.Model.Roles.Provider>(resource.Recorder, resource)));
}
// map outcome to status concept key or relationships
if (resource.Outcome != null)
{
if (resource.Outcome.Coding.Any(o => o.System == "http://hl7.org/fhir/adverse-event-outcome"))
{
if (resource.Outcome.Coding.Any(o => o.Code == "fatal"))
{
retVal.Relationships.Add(new ActRelationship(ActRelationshipTypeKeys.IsCauseOf, new CodedObservation {
TypeConceptKey = ObservationTypeKeys.ClinicalState, ValueKey = Guid.Parse("6df3720b-857f-4ba2-826f-b7f1d3c3adbb")
}));
}
else if (resource.Outcome.Coding.Any(o => o.Code == "ongoing"))
{
retVal.StatusConceptKey = StatusKeys.Active;
}
else if (resource.Outcome.Coding.Any(o => o.Code == "resolved"))
{
retVal.StatusConceptKey = StatusKeys.Completed;
}
}
}
// map instance to relationships and participations
if (resource.SuspectEntity != null)
{
foreach (var component in resource.SuspectEntity)
{
var adm = new SubstanceAdministration();
if (component.Instance.GetType() == typeof(Medication))
{
adm.Participations.Add(component.Instance.Reference.StartsWith("urn:uuid:") ? new ActParticipation(ActParticipationKey.Consumable, Guid.Parse(component.Instance.Reference.Substring(9))) : new ActParticipation(ActParticipationKey.Consumable, DataTypeConverter.ResolveEntity <Core.Model.Entities.ManufacturedMaterial>(component.Instance, resource)));
// adm.Participations.Add(new ActParticipation(ActParticipationKey.Consumable, DataTypeConverter.ResolveEntity<Core.Model.Entities.ManufacturedMaterial>(component.Instance, resource)));
retVal.Relationships.Add(new ActRelationship(ActRelationshipTypeKeys.RefersTo, adm));
}
else if (component.Instance.GetType() == typeof(Substance))
{
adm.Participations.Add((component.Instance.Reference.StartsWith("urn:uuid:") ? new ActParticipation(ActParticipationKey.Product, Guid.Parse(component.Instance.Reference.Substring(9))) : new ActParticipation(ActParticipationKey.Product, DataTypeConverter.ResolveEntity <Core.Model.Entities.Material>(component.Instance, resource))));
// adm.Participations.Add(new ActParticipation(ActParticipationKey.Product, DataTypeConverter.ResolveEntity<Core.Model.Entities.Material>(component.Instance, resource)));
retVal.Relationships.Add(new ActRelationship(ActRelationshipTypeKeys.RefersTo, adm));
}
}
}
return(retVal);
}