private ITaxonClassification MapAphiaRecordToTaxonClassification(AphiaRecord record)
{
var result = new TaxonClassificationServiceModel
{
Rank = record.rank.MapTaxonRankStringToTaxonRankType(),
ScientificName = record.scientificname,
Authority = record.authority,
CanonicalName = record.valid_name
};
result.Classification.Add(new TaxonRankServiceModel
{
Rank = TaxonRankType.Kingdom,
ScientificName = record.kingdom
});
result.Classification.Add(new TaxonRankServiceModel
{
Rank = TaxonRankType.Phylum,
ScientificName = record.phylum
});
result.Classification.Add(new TaxonRankServiceModel
{
Rank = TaxonRankType.Class,
ScientificName = record.@class
});
result.Classification.Add(new TaxonRankServiceModel
{
Rank = TaxonRankType.Order,
ScientificName = record.order
});
result.Classification.Add(new TaxonRankServiceModel
{
Rank = TaxonRankType.Family,
ScientificName = record.family
});
result.Classification.Add(new TaxonRankServiceModel
{
Rank = TaxonRankType.Genus,
ScientificName = record.genus
});
return(result);
}
protected void Page_Load(object sender, EventArgs evr)
{
String name = Request["name"];
List <TaxonRecord> list = new List <TaxonRecord>();
// get records from worms service
Worms.AphiaNameServicePortTypeClient client = new Worms.AphiaNameServicePortTypeClient();
Worms.AphiaRecord[] records = null;
// check if the AphiaID is given
if (name.IndexOf(':') != -1 && name.IndexOf('(') != -1 && name.IndexOf(')') != -1)
{
int s = name.IndexOf('(');
int e = name.IndexOf(')');
int AphiaID = int.Parse(name.Substring(s + 1, e - s - 1));
Worms.AphiaRecord record = client.getAphiaRecordByID(AphiaID);
if (record == null)
{
Response.Write("[]");
Response.End();
}
List <Worms.AphiaRecord> alist = new List <Worms.AphiaRecord>();
alist.Add(record);
records = alist.ToArray();
}
else
{
records = client.getAphiaRecordsByVernacular(name, true, 0);
}
if (records == null)
{
Response.Write("[]");
Response.End();
}
for (int i = 0; i < records.Length; i++)
{
AphiaRecord record = records[i];
TaxonRecord taxon = new TaxonRecord();
taxon.AphiaID = record.AphiaID;
taxon.authority = record.authority;
taxon.citation = record.citation;
taxon.@class = record.@class;
taxon.family = record.family;
taxon.genus = record.genus;
taxon.isBrackish = record.isBrackish;
taxon.isExtinct = record.isExtinct;
taxon.isFreshwater = record.isFreshwater;
taxon.kingdom = record.kingdom;
taxon.lsid = record.lsid;
taxon.match_type = record.match_type;
taxon.modified = record.modified;
taxon.order = record.order;
taxon.phylum = record.phylum;
taxon.rank = record.rank;
taxon.scientificname = record.scientificname;
taxon.status = record.status;
taxon.url = record.url;
taxon.valid_name = record.valid_name;
taxon.vernacular = "???";
list.Add(taxon);
}
// spawn threads to get vernacular name
foreach (TaxonRecord taxon in list)
{
taxon.thread = new Thread(taxon.GetVernacular);
taxon.thread.Start();
}
// wait to all treads to complete
foreach (TaxonRecord taxon in list)
{
taxon.thread.Join();
taxon.thread = null;
}
js_list outlist = new js_list();
foreach (TaxonRecord taxon in list)
{
String value = taxon.vernacular + ": " + taxon.scientificname;
jsresponse item = outlist.add();
item.add("value", value);
item.add("text", taxon.vernacular);
}
Response.ContentType = "text/json";
Response.Write(outlist.write());
}