private void Run3DJury(string name, string dirName, string alignFile = null, DCDFile dcd = null)
{
DateTime cpuStart = DateTime.Now;
ClusterOutput output;
DistanceMeasure distance = null;
if (alignFile != null)
{
distance = CreateMeasure(name, null, opt.other.oDistance, opt.other.oAtoms, opt.other.reference1Djury,
alignFile, opt.other.hammingProfile, opt.other.referenceProfile);
}
else
if (dirName != null)
{
distance = CreateMeasure(name, dirName, opt.other.oDistance, opt.other.oAtoms, opt.other.reference1Djury,
alignFile, opt.other.hammingProfile, opt.other.referenceProfile);
}
else
{
distance = CreateMeasureForDCD(dcd, opt.other.oDistance, opt.other.oAtoms, opt.other.reference1Djury,
opt.other.alignFileName, opt.other.hammingProfile, opt.other.referenceProfile);
}
Jury3D ju = new Jury3D(distance);
if (beginJob != null)
{
beginJob(currentProcessName, ju.ToString(), dirName, distance.ToString());
}
progressDic.Add(name, ju);
distance.InitMeasure();
clType = ju.ToString();
output = ju.Run3DJury();
UpdateOutput(name, dirName, alignFile, output, distance.ToString(), cpuStart, DateTime.Now, ju);
progressDic.Remove(name);
}
private void Run3DJury(string name, string dirName, string alignFile=null, DCDFile dcd = null)
{
DateTime cpuStart = DateTime.Now;
ClusterOutput output;
DistanceMeasure distance = null;
if(alignFile!=null)
distance = CreateMeasure(name,null,opt.other.oDistance, opt.other.oAtoms, opt.other.reference1Djury,
alignFile, opt.other.hammingProfile, opt.other.referenceProfile);
else
if(dirName!=null)
distance = CreateMeasure(name,dirName,opt.other.oDistance, opt.other.oAtoms, opt.other.reference1Djury,
alignFile, opt.other.hammingProfile, opt.other.referenceProfile);
else
distance = CreateMeasureForDCD(dcd, opt.other.oDistance, opt.other.oAtoms, opt.other.reference1Djury,
opt.other.alignFileName, opt.other.hammingProfile, opt.other.referenceProfile);
Jury3D ju = new Jury3D(distance);
progressDic.Add(name, ju);
distance.InitMeasure();
clType = ju.ToString();
output = ju.Run3DJury();
UpdateOutput(name, dirName,alignFile,output, distance.ToString(), cpuStart, DateTime.Now,ju);
progressDic.Remove(name);
}
