public ImportFastaControl(SkylineWindow skylineWindow)
{
SkylineWindow = skylineWindow;
InitializeComponent();
ImportFastaHelper = new ImportFastaHelper(tbxFasta, tbxError, panelError);
tbxFastaHeightDifference = Height - tbxFasta.Height;
_driverEnzyme = new SettingsListComboDriver<Enzyme>(comboEnzyme, Settings.Default.EnzymeList);
_driverEnzyme.LoadList(SkylineWindow.Document.Settings.PeptideSettings.Enzyme.GetKey());
MaxMissedCleavages = skylineWindow.Document.Settings.PeptideSettings.DigestSettings.MaxMissedCleavages;
}
private SrmDocument GetNewDocument(SrmDocument document, bool validating, ref IdentityPath selectedPath, out int emptyPeptideGroups)
{
var fastaHelper = new ImportFastaHelper(tbxFasta, tbxError, panelError);
if ((document = fastaHelper.AddFasta(document, ref selectedPath, out emptyPeptideGroups)) == null)
{
tabControl1.SelectedTab = tabPageFasta; // To show fasta errors
return null;
}
if ((document = AddProteins(document, ref selectedPath)) == null)
{
return null;
}
if ((document = AddPeptides(document, validating, ref selectedPath)) == null)
{
return null;
}
if ((document = AddTransitionList(document, ref selectedPath)) == null)
{
return null;
}
return document;
}