private void SetSpecimen(ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult)
{
XmlNode diagnosisTableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='specimen_description']", this.m_NameSpaceManager);
XmlNode rowSpecimenNode = diagnosisTableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='specimen_description']", this.m_NameSpaceManager);
XmlNode rowDiagnosisNode = diagnosisTableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='specimen_diagnosis']", this.m_NameSpaceManager);
XmlNode insertAfterRow = rowSpecimenNode;
foreach (YellowstonePathology.Business.Test.Surgical.SurgicalSpecimen surgicalSpecimen in comprehensiveColonCancerProfileResult.SurgicalSpecimenCollection)
{
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrder(surgicalSpecimen.SpecimenOrderId);
StringBuilder specimenDescription = new StringBuilder();
specimenDescription.Append(specimenOrder.Description);
//Removed by SH 11/7/2017 may need to put it back.
//foreach (YellowstonePathology.Business.Test.AliquotOrder aliquotOrder in specimenOrder.AliquotOrderCollection)
//{
// specimenDescription.Append(aliquotOrder.Label + ", ");
//}
//specimenDescription.Remove(specimenDescription.Length - 2, 2);
XmlNode rowSpecimenNodeClone = rowSpecimenNode.Clone();
rowSpecimenNodeClone.SelectSingleNode("descendant::w:r[w:t='specimen_description']/w:t", this.m_NameSpaceManager).InnerText = specimenDescription.ToString();
rowSpecimenNodeClone.SelectSingleNode("descendant::w:r[w:t='surgical_reportno']/w:t", this.m_NameSpaceManager).InnerText = comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.ReportNo;
diagnosisTableNode.InsertAfter(rowSpecimenNodeClone, insertAfterRow);
XmlNode rowDiagnosisNodeClone = rowDiagnosisNode.Clone();
this.SetXMLNodeParagraphDataNode(rowDiagnosisNodeClone, "specimen_diagnosis", surgicalSpecimen.Diagnosis);
diagnosisTableNode.InsertAfter(rowDiagnosisNodeClone, rowSpecimenNodeClone);
insertAfterRow = rowDiagnosisNodeClone;
}
diagnosisTableNode.RemoveChild(rowSpecimenNode);
diagnosisTableNode.RemoveChild(rowDiagnosisNode);
}
private void SetIHC(ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult)
{
XmlNode tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='mlh1_result']", this.m_NameSpaceManager);
XmlNode rowmlh1Node = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='mlh1_result']", this.m_NameSpaceManager);
XmlNode rowmsh2Node = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='msh2_result']", this.m_NameSpaceManager);
XmlNode rowmsh6Node = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='msh6_result']", this.m_NameSpaceManager);
XmlNode rowpms2Node = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='pms2_result']", this.m_NameSpaceManager);
XmlNode insertAfterRow = rowmlh1Node;
foreach (YellowstonePathology.Business.Test.LynchSyndrome.PanelSetOrderLynchSyndromeIHC testOrder in comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHCCollection)
{
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(testOrder.OrderedOnId);
YellowstonePathology.Business.Test.AliquotOrder aliquotOrder = specimenOrder.AliquotOrderCollection.GetByAliquotOrderId(testOrder.OrderedOnId);
YellowstonePathology.Business.Test.LynchSyndrome.IHCResult ihcResult = YellowstonePathology.Business.Test.LynchSyndrome.IHCResult.CreateResultFromResultCode(testOrder.ResultCode);
XmlNode rowmlh1NodeClone = rowmlh1Node.Clone();
rowmlh1NodeClone.SelectSingleNode("descendant::w:r[w:t='mlh1_result']/w:t", this.m_NameSpaceManager).InnerText = ihcResult.MLH1Result.Description;
rowmlh1NodeClone.SelectSingleNode("descendant::w:r[w:t='ihc_reportno']/w:t", this.m_NameSpaceManager).InnerText = testOrder.ReportNo;
rowmlh1NodeClone.SelectSingleNode("descendant::w:r[w:t='ihc_block_label']/w:t", this.m_NameSpaceManager).InnerText = aliquotOrder.Label;
tableNode.InsertAfter(rowmlh1NodeClone, insertAfterRow);
XmlNode rowmsh2NodeClone = rowmsh2Node.Clone();
rowmsh2NodeClone.SelectSingleNode("descendant::w:r[w:t='msh2_result']/w:t", this.m_NameSpaceManager).InnerText = ihcResult.MSH2Result.Description;
tableNode.InsertAfter(rowmsh2NodeClone, rowmlh1NodeClone);
XmlNode rowmsh6NodeClone = rowmsh6Node.Clone();
rowmsh6NodeClone.SelectSingleNode("descendant::w:r[w:t='msh6_result']/w:t", this.m_NameSpaceManager).InnerText = ihcResult.MSH6Result.Description;
tableNode.InsertAfter(rowmsh6NodeClone, rowmsh2NodeClone);
XmlNode rowpms2NodeClone = rowpms2Node.Clone();
rowpms2NodeClone.SelectSingleNode("descendant::w:r[w:t='pms2_result']/w:t", this.m_NameSpaceManager).InnerText = ihcResult.PMS2Result.Description;
tableNode.InsertAfter(rowpms2NodeClone, rowmsh6NodeClone);
insertAfterRow = rowpms2NodeClone;
}
if (comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHCCollection.Count > 0)
{
this.DeleteRow("mlh1_result");
this.DeleteRow("msh2_result");
this.DeleteRow("msh6_result");
this.DeleteRow("pms2_result");
}
else
{
base.ReplaceText("ihc_reportno", "Not Included");
base.ReplaceText("mlh1_result", "Not Included");
base.ReplaceText("msh2_result", "Not Included");
base.ReplaceText("msh6_result", "Not Included");
base.ReplaceText("pms2_result", "Not Included");
}
}
public override void Render()
{
this.m_TemplateName = @"\\CFileServer\Documents\ReportTemplates\XmlTemplates\ComprehensiveColonCancerProfile.3.xml";
this.OpenTemplate();
this.SetDemographicsV2();
this.SetReportDistribution();
ComprehensiveColonCancerProfile comprehensiveColonCancerProfile = (ComprehensiveColonCancerProfile)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(this.m_PanelSetOrder.ReportNo);
ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult = new ComprehensiveColonCancerProfileResult(this.m_AccessionOrder, comprehensiveColonCancerProfile);
base.ReplaceText("report_interpretation", comprehensiveColonCancerProfile.Interpretation);
base.ReplaceText("ajcc_stage", comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.AJCCStage);
this.SetSpecimen(comprehensiveColonCancerProfileResult);
this.SetIHC(comprehensiveColonCancerProfileResult);
this.SetMolecularResults(comprehensiveColonCancerProfileResult);
base.ReplaceText("pathologist_signature", comprehensiveColonCancerProfile.Signature);
this.SaveReport();
}
public override void Render()
{
this.m_TemplateName = @"\\CFileServer\Documents\ReportTemplates\XmlTemplates\ComprehensiveColonCancerProfile.1.xml";
this.OpenTemplate();
this.SetDemographicsV2();
this.SetReportDistribution();
ComprehensiveColonCancerProfile comprehensiveColonCancerProfile = (ComprehensiveColonCancerProfile)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(this.m_PanelSetOrder.ReportNo);
ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult = new ComprehensiveColonCancerProfileResult(this.m_AccessionOrder, comprehensiveColonCancerProfile);
base.ReplaceText("report_interpretation", comprehensiveColonCancerProfile.Interpretation);
base.ReplaceText("ajcc_stage", comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.AJCCStage);
this.SetSpecimen(comprehensiveColonCancerProfileResult);
this.SetIHC(comprehensiveColonCancerProfileResult);
this.SetMolecularResults(comprehensiveColonCancerProfileResult);
base.ReplaceText("pathologist_signature", comprehensiveColonCancerProfile.Signature);
this.SaveReport();
}
public override void ToXml(XElement document)
{
ComprehensiveColonCancerProfile comprehensiveColonCancerProfile = (ComprehensiveColonCancerProfile)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(this.m_ReportNo);
ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult = new ComprehensiveColonCancerProfileResult(this.m_AccessionOrder, comprehensiveColonCancerProfile);
this.AddHeader(document, comprehensiveColonCancerProfile, "Comprehensive Colon Cancer Profile");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Interpretation:", document, "F");
this.HandleLongString(comprehensiveColonCancerProfile.Interpretation, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Pathologist: " + comprehensiveColonCancerProfile.Signature, document, "F");
if (comprehensiveColonCancerProfile.FinalTime.HasValue == true)
{
this.AddNextObxElement("E-signed " + comprehensiveColonCancerProfile.FinalTime.Value.ToString("MM/dd/yyyy HH:mm"), document, "F");
}
this.AddNextObxElement("", document, "F");
this.AddAmendments(document);
string specimenDescription = comprehensiveColonCancerProfileResult.SpecimenOrder.GetSpecimenDescriptionString();
this.HandleLongString("Specimen:", document, "F");
this.HandleLongString(specimenDescription, document, "F");
this.AddNextObxElement("", document, "F");
this.HandleLongString("Diagnosis:", document, "F");
this.HandleLongString(comprehensiveColonCancerProfileResult.SurgicalSpecimen.Diagnosis, document, "F");
this.AddNextObxElement("", document, "F");
this.HandleLongString("AJCC Pathologic Staging:", document, "F");
this.HandleLongString(comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.AJCCStage, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Reference Report: " + comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Mismatch Repair Protein Expression by Immunohistochemistry: ", document, "F");
this.AddNextObxElement("MLH1: " + comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC.MLH1Result, document, "F");
this.AddNextObxElement("MSH2: " + comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC.MSH2Result, document, "F");
this.AddNextObxElement("MSH6: " + comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC.MSH6Result, document, "F");
this.AddNextObxElement("PMS2: " + comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC.PMS2Result, document, "F");
this.AddNextObxElement("Reference Report: " + comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
if (comprehensiveColonCancerProfileResult.BRAFV600EKIsOrdered == true ||
comprehensiveColonCancerProfileResult.KRASStandardIsOrderd == true ||
comprehensiveColonCancerProfileResult.MLHIsOrdered == true)
{
this.AddNextObxElement("Molecular Analysis", document, "F");
this.AddNextObxElement("", document, "F");
}
if (comprehensiveColonCancerProfileResult.PanelSetOrderMLH1MethylationAnalysis != null)
{
this.AddNextObxElement("MLH1 Promoter Methylation Analysis: " + comprehensiveColonCancerProfileResult.PanelSetOrderMLH1MethylationAnalysis.ReportNo, document, "F");
this.AddNextObxElement("Result: " + comprehensiveColonCancerProfileResult.PanelSetOrderMLH1MethylationAnalysis.Result, document, "F");
this.AddNextObxElement("", document, "F");
}
if (comprehensiveColonCancerProfileResult.RASRAFIsOrdered == true)
{
this.AddNextObxElement("KRAS Mutation Analysis: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.ReportNo, document, "F");
this.AddNextObxElement("Result: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.KRASResult, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("BRAF V600E/K Mutation Analysis: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.ReportNo, document, "F");
this.AddNextObxElement("Result: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.BRAFResult, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("NRAS Mutation Analysis: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.ReportNo, document, "F");
this.AddNextObxElement("Result: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.NRASResult, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("HRAS Mutation Analysis: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.ReportNo, document, "F");
this.AddNextObxElement("Result: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.HRASResult, document, "F");
this.AddNextObxElement("", document, "F");
}
}
private void SetSpecimen(ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult)
{
XmlNode diagnosisTableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='specimen_description']", this.m_NameSpaceManager);
XmlNode rowSpecimenNode = diagnosisTableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='specimen_description']", this.m_NameSpaceManager);
XmlNode rowDiagnosisNode = diagnosisTableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='specimen_diagnosis']", this.m_NameSpaceManager);
XmlNode insertAfterRow = rowSpecimenNode;
foreach (YellowstonePathology.Business.Test.Surgical.SurgicalSpecimen surgicalSpecimen in comprehensiveColonCancerProfileResult.SurgicalSpecimenCollection)
{
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrder(surgicalSpecimen.SpecimenOrderId);
StringBuilder specimenDescription = new StringBuilder();
specimenDescription.Append(specimenOrder.Description + ": ");
foreach (YellowstonePathology.Business.Test.AliquotOrder aliquotOrder in specimenOrder.AliquotOrderCollection)
{
specimenDescription.Append(aliquotOrder.Label + ", ");
}
specimenDescription.Remove(specimenDescription.Length - 2, 2);
XmlNode rowSpecimenNodeClone = rowSpecimenNode.Clone();
rowSpecimenNodeClone.SelectSingleNode("descendant::w:r[w:t='specimen_description']/w:t", this.m_NameSpaceManager).InnerText = specimenDescription.ToString();
rowSpecimenNodeClone.SelectSingleNode("descendant::w:r[w:t='surgical_reportno']/w:t", this.m_NameSpaceManager).InnerText = comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.ReportNo;
diagnosisTableNode.InsertAfter(rowSpecimenNodeClone, insertAfterRow);
XmlNode rowDiagnosisNodeClone = rowDiagnosisNode.Clone();
this.SetXMLNodeParagraphDataNode(rowDiagnosisNodeClone, "specimen_diagnosis", surgicalSpecimen.Diagnosis);
diagnosisTableNode.InsertAfter(rowDiagnosisNodeClone, rowSpecimenNodeClone);
insertAfterRow = rowDiagnosisNodeClone;
}
diagnosisTableNode.RemoveChild(rowSpecimenNode);
diagnosisTableNode.RemoveChild(rowDiagnosisNode);
}
private void SetMolecularResults(ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult)
{
XmlNode tableNode = null;
XmlNode rowResultNode = null;
XmlNode insertAfterRow = null;
foreach (YellowstonePathology.Business.Test.PanelSetOrder testOrder in comprehensiveColonCancerProfileResult.MolecularTestOrderCollection)
{
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimen = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(testOrder.OrderedOnId);
YellowstonePathology.Business.Test.AliquotOrder aliquot = specimen.AliquotOrderCollection.GetByAliquotOrderId(testOrder.OrderedOnId);
if (testOrder is LynchSyndrome.PanelSetOrderMLH1MethylationAnalysis)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='mlh1promoter_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='mlh1promoter_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("mlh1promoter", ((LynchSyndrome.PanelSetOrderMLH1MethylationAnalysis)testOrder).Result, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
else if (testOrder is KRASStandard.KRASStandardTestOrder)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("kras", ((KRASStandard.KRASStandardTestOrder)testOrder).Result, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
else if (testOrder is KRASExon23Mutation.KRASExon23MutationTestOrder)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("kras", ((KRASExon23Mutation.KRASExon23MutationTestOrder)testOrder).Result, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
else if (testOrder is KRASExon4Mutation.KRASExon4MutationTestOrder)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("kras", ((KRASExon4Mutation.KRASExon4MutationTestOrder)testOrder).Result, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
else if (testOrder is BRAFV600EK.BRAFV600EKTestOrder)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='braf_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='braf_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("braf", ((BRAFV600EK.BRAFV600EKTestOrder)testOrder).Result, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
else if (testOrder is NRASMutationAnalysis.NRASMutationAnalysisTestOrder)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='nras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='nras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("nras", ((NRASMutationAnalysis.NRASMutationAnalysisTestOrder)testOrder).Result, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
else if (testOrder is RASRAFPanel.RASRAFPanelTestOrder)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("kras", ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).KRASResult, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='braf_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='braf_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("braf", ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).BRAFResult, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='nras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='nras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("nras", ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).NRASResult, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='hras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='hras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("hras", ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).HRASResult, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
}
this.DeleteRow("mlh1promoter_result");
this.DeleteRow("braf_result");
this.DeleteRow("kras_result");
this.DeleteRow("nras_result");
this.DeleteRow("hras_result");
if(comprehensiveColonCancerProfileResult.MolecularTestOrderCollection.Count > 0)
{
this.DeleteRow("None Performed");
}
}
public override void Render()
{
this.m_TemplateName = @"\\CFileServer\Documents\ReportTemplates\XmlTemplates\ComprehensiveColonCancerProfile.1.xml";
this.OpenTemplate();
this.SetDemographicsV2();
this.SetReportDistribution();
ComprehensiveColonCancerProfile comprehensiveColonCancerProfile = (ComprehensiveColonCancerProfile)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(this.m_PanelSetOrder.ReportNo);
ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult = new ComprehensiveColonCancerProfileResult(this.m_AccessionOrder, comprehensiveColonCancerProfile);
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(comprehensiveColonCancerProfile.OrderedOnId);
YellowstonePathology.Business.Test.AliquotOrder aliquotOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetAliquotOrder(comprehensiveColonCancerProfile.OrderedOnId);
string specimenDescription = specimenOrder.Description;
if (aliquotOrder != null)
{
specimenDescription += ": " + aliquotOrder.Label;
}
base.ReplaceText("report_interpretation", comprehensiveColonCancerProfile.Interpretation);
base.ReplaceText("specimen_description", specimenDescription);
base.ReplaceText("surgical_reportno", comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.ReportNo);
base.ReplaceText("specimen_diagnosis", comprehensiveColonCancerProfileResult.SurgicalSpecimen.Diagnosis);
base.ReplaceText("ajcc_stage", comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.AJCCStage);
if (comprehensiveColonCancerProfileResult.IHCResult != null)
{
base.ReplaceText("mlh1_result", comprehensiveColonCancerProfileResult.IHCResult.MLH1Result.Description);
base.ReplaceText("msh2_result", comprehensiveColonCancerProfileResult.IHCResult.MSH2Result.Description);
base.ReplaceText("msh6_result", comprehensiveColonCancerProfileResult.IHCResult.MSH6Result.Description);
base.ReplaceText("pms2_result", comprehensiveColonCancerProfileResult.IHCResult.PMS2Result.Description);
}
else
{
base.ReplaceText("mlh1_result", "Not Included");
base.ReplaceText("msh2_result", "Not Included");
base.ReplaceText("msh6_result", "Not Included");
base.ReplaceText("pms2_result", "Not Included");
}
if (comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC != null)
{
base.ReplaceText("ihc_reportno", comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC.ReportNo);
}
else
{
base.ReplaceText("ihc_reportno", "Not Included");
}
if (comprehensiveColonCancerProfileResult.RASRAFIsOrdered == true)
{
base.ReplaceText("braf_result", comprehensiveColonCancerProfileResult.RASRAFTestOrder.BRAFResult);
base.ReplaceText("braf_reportno", comprehensiveColonCancerProfile.ReportNo);
base.ReplaceText("kras_result", comprehensiveColonCancerProfileResult.RASRAFTestOrder.KRASResult);
base.ReplaceText("kras_reportno", comprehensiveColonCancerProfile.ReportNo);
base.ReplaceText("nras_result", comprehensiveColonCancerProfileResult.RASRAFTestOrder.NRASResult);
base.ReplaceText("nras_reportno", comprehensiveColonCancerProfile.ReportNo);
base.ReplaceText("hras_result", comprehensiveColonCancerProfileResult.RASRAFTestOrder.HRASResult);
base.ReplaceText("hras_reportno", comprehensiveColonCancerProfile.ReportNo);
}
if (comprehensiveColonCancerProfileResult.PanelSetOrderMLH1MethylationAnalysis != null)
{
base.ReplaceText("mlh1promoter_result", comprehensiveColonCancerProfileResult.PanelSetOrderMLH1MethylationAnalysis.Result);
base.ReplaceText("mlh1promoter_reportno", comprehensiveColonCancerProfileResult.PanelSetOrderMLH1MethylationAnalysis.ReportNo);
}
else
{
this.DeleteRow("mlh1promoter_result");
}
/*
* if (comprehensiveColonCancerProfileResult.KRASStandardIsOrderd == true)
* {
* base.ReplaceText("kras_result", comprehensiveColonCancerProfileResult.KRASStandardTestOrder.Result);
* base.ReplaceText("kras_report_no", comprehensiveColonCancerProfileResult.KRASStandardTestOrder.ReportNo);
* }
* else
* {
* this.DeleteRow("kras_result");
* }
*
* if (comprehensiveColonCancerProfileResult.BRAFV600EKIsOrdered == true)
* {
* base.ReplaceText("braf_result", comprehensiveColonCancerProfileResult.BRAFV600EKTestOrder.Result);
* base.ReplaceText("braf_report_no", comprehensiveColonCancerProfileResult.BRAFV600EKTestOrder.ReportNo);
* }
* else
* {
* this.DeleteRow("braf_result");
* }
*
* if (comprehensiveColonCancerProfileResult.KRASExon23MutationIsOrdered == true)
* {
* base.ReplaceText("kras23_result", comprehensiveColonCancerProfileResult.KRASExon23MutationTestOrder.Result);
* base.ReplaceText("kras23_report_no", comprehensiveColonCancerProfileResult.KRASExon23MutationTestOrder.ReportNo);
* }
* else
* {
* this.DeleteRow("kras23_result");
* }
*
* if (comprehensiveColonCancerProfileResult.KRASExon4MutationIsOrdered == true)
* {
* base.ReplaceText("kras4_result", comprehensiveColonCancerProfileResult.KRASExon4MutationTestOrder.Result);
* base.ReplaceText("kras4_report_no", comprehensiveColonCancerProfileResult.KRASExon4MutationTestOrder.ReportNo);
* }
* else
* {
* this.DeleteRow("kras4_result");
* }
*
* if (comprehensiveColonCancerProfileResult.NRASMutationAnalysisIsOrdered == true)
* {
* base.ReplaceText("nras_result", comprehensiveColonCancerProfileResult.NRASMutationAnalysisTestOrder.Result);
* base.ReplaceText("nras_report_no", comprehensiveColonCancerProfileResult.NRASMutationAnalysisTestOrder.ReportNo);
* }
* else
* {
* this.DeleteRow("nras_result");
* }
*/
base.ReplaceText("pathologist_signature", comprehensiveColonCancerProfile.Signature);
this.SaveReport();
}
public override void ToXml(XElement document)
{
ComprehensiveColonCancerProfile comprehensiveColonCancerProfile = (ComprehensiveColonCancerProfile)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(this.m_ReportNo);
ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult = new ComprehensiveColonCancerProfileResult(this.m_AccessionOrder, comprehensiveColonCancerProfile);
this.AddHeader(document, comprehensiveColonCancerProfile, "Comprehensive Colon Cancer Profile");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Interpretation:", document, "F");
this.HandleLongString(comprehensiveColonCancerProfile.Interpretation, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Pathologist: " + comprehensiveColonCancerProfile.Signature, document, "F");
if (comprehensiveColonCancerProfile.FinalTime.HasValue == true)
{
this.AddNextObxElement("E-signed " + comprehensiveColonCancerProfile.FinalTime.Value.ToString("MM/dd/yyyy HH:mm"), document, "F");
}
this.AddNextObxElement("", document, "F");
this.AddAmendments(document);
string specimenDescription = comprehensiveColonCancerProfileResult.SpecimenOrder.GetSpecimenDescriptionString();
this.HandleLongString("Specimen:", document, "F");
this.HandleLongString(specimenDescription, document, "F");
this.AddNextObxElement("", document, "F");
this.HandleLongString("Diagnosis:", document, "F");
this.HandleLongString(comprehensiveColonCancerProfileResult.SurgicalSpecimen.Diagnosis, document, "F");
this.AddNextObxElement("", document, "F");
this.HandleLongString("AJCC Pathologic Staging:", document, "F");
this.HandleLongString(comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.AJCCStage, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Reference Report: " + comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Mismatch Repair Protein Expression by Immunohistochemistry: ", document, "F");
this.AddNextObxElement("MLH1: " + comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC.MLH1Result, document, "F");
this.AddNextObxElement("MSH2: " + comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC.MSH2Result, document, "F");
this.AddNextObxElement("MSH6: " + comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC.MSH6Result, document, "F");
this.AddNextObxElement("PMS2: " + comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC.PMS2Result, document, "F");
this.AddNextObxElement("Reference Report: " + comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
if (comprehensiveColonCancerProfileResult.BRAFV600EKIsOrdered == true ||
comprehensiveColonCancerProfileResult.KRASStandardIsOrderd == true ||
comprehensiveColonCancerProfileResult.MLHIsOrdered == true)
{
this.AddNextObxElement("Molecular Analysis", document, "F");
this.AddNextObxElement("", document, "F");
}
if (comprehensiveColonCancerProfileResult.PanelSetOrderMLH1MethylationAnalysis != null)
{
this.AddNextObxElement("MLH1 Promoter Methylation Analysis: " + comprehensiveColonCancerProfileResult.PanelSetOrderMLH1MethylationAnalysis.ReportNo, document, "F");
this.AddNextObxElement("Result: " + comprehensiveColonCancerProfileResult.PanelSetOrderMLH1MethylationAnalysis.Result, document, "F");
this.AddNextObxElement("", document, "F");
}
if (comprehensiveColonCancerProfileResult.RASRAFIsOrdered == true)
{
this.AddNextObxElement("KRAS Mutation Analysis: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.ReportNo, document, "F");
this.AddNextObxElement("Result: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.KRASResult, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("BRAF V600E/K Mutation Analysis: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.ReportNo, document, "F");
this.AddNextObxElement("Result: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.BRAFResult, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("NRAS Mutation Analysis: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.ReportNo, document, "F");
this.AddNextObxElement("Result: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.NRASResult, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("HRAS Mutation Analysis: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.ReportNo, document, "F");
this.AddNextObxElement("Result: " + comprehensiveColonCancerProfileResult.RASRAFTestOrder.HRASResult, document, "F");
this.AddNextObxElement("", document, "F");
}
}
public override void Render()
{
this.m_TemplateName = @"\\CFileServer\Documents\ReportTemplates\XmlTemplates\ComprehensiveColonCancerProfile.1.xml";
this.OpenTemplate();
this.SetDemographicsV2();
this.SetReportDistribution();
ComprehensiveColonCancerProfile comprehensiveColonCancerProfile = (ComprehensiveColonCancerProfile)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(this.m_PanelSetOrder.ReportNo);
ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult = new ComprehensiveColonCancerProfileResult(this.m_AccessionOrder, comprehensiveColonCancerProfile);
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(comprehensiveColonCancerProfile.OrderedOnId);
YellowstonePathology.Business.Test.AliquotOrder aliquotOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetAliquotOrder(comprehensiveColonCancerProfile.OrderedOnId);
string specimenDescription = specimenOrder.Description;
if (aliquotOrder != null) specimenDescription += ": " + aliquotOrder.Label;
base.ReplaceText("report_interpretation", comprehensiveColonCancerProfile.Interpretation);
base.ReplaceText("specimen_description", specimenDescription);
base.ReplaceText("surgical_reportno", comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.ReportNo);
base.ReplaceText("specimen_diagnosis", comprehensiveColonCancerProfileResult.SurgicalSpecimen.Diagnosis);
base.ReplaceText("ajcc_stage", comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.AJCCStage);
if (comprehensiveColonCancerProfileResult.IHCResult != null)
{
base.ReplaceText("mlh1_result", comprehensiveColonCancerProfileResult.IHCResult.MLH1Result.Description);
base.ReplaceText("msh2_result", comprehensiveColonCancerProfileResult.IHCResult.MSH2Result.Description);
base.ReplaceText("msh6_result", comprehensiveColonCancerProfileResult.IHCResult.MSH6Result.Description);
base.ReplaceText("pms2_result", comprehensiveColonCancerProfileResult.IHCResult.PMS2Result.Description);
}
else
{
base.ReplaceText("mlh1_result", "Not Included");
base.ReplaceText("msh2_result", "Not Included");
base.ReplaceText("msh6_result", "Not Included");
base.ReplaceText("pms2_result", "Not Included");
}
if (comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC != null)
{
base.ReplaceText("ihc_reportno", comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHC.ReportNo);
}
else
{
base.ReplaceText("ihc_reportno", "Not Included");
}
if (comprehensiveColonCancerProfileResult.RASRAFIsOrdered == true)
{
base.ReplaceText("braf_result", comprehensiveColonCancerProfileResult.RASRAFTestOrder.BRAFResult);
base.ReplaceText("braf_reportno", comprehensiveColonCancerProfile.ReportNo);
base.ReplaceText("kras_result", comprehensiveColonCancerProfileResult.RASRAFTestOrder.KRASResult);
base.ReplaceText("kras_reportno", comprehensiveColonCancerProfile.ReportNo);
base.ReplaceText("nras_result", comprehensiveColonCancerProfileResult.RASRAFTestOrder.NRASResult);
base.ReplaceText("nras_reportno", comprehensiveColonCancerProfile.ReportNo);
base.ReplaceText("hras_result", comprehensiveColonCancerProfileResult.RASRAFTestOrder.HRASResult);
base.ReplaceText("hras_reportno", comprehensiveColonCancerProfile.ReportNo);
}
if (comprehensiveColonCancerProfileResult.PanelSetOrderMLH1MethylationAnalysis != null)
{
base.ReplaceText("mlh1promoter_result", comprehensiveColonCancerProfileResult.PanelSetOrderMLH1MethylationAnalysis.Result);
base.ReplaceText("mlh1promoter_reportno", comprehensiveColonCancerProfileResult.PanelSetOrderMLH1MethylationAnalysis.ReportNo);
}
else
{
this.DeleteRow("mlh1promoter_result");
}
/*
if (comprehensiveColonCancerProfileResult.KRASStandardIsOrderd == true)
{
base.ReplaceText("kras_result", comprehensiveColonCancerProfileResult.KRASStandardTestOrder.Result);
base.ReplaceText("kras_report_no", comprehensiveColonCancerProfileResult.KRASStandardTestOrder.ReportNo);
}
else
{
this.DeleteRow("kras_result");
}
if (comprehensiveColonCancerProfileResult.BRAFV600EKIsOrdered == true)
{
base.ReplaceText("braf_result", comprehensiveColonCancerProfileResult.BRAFV600EKTestOrder.Result);
base.ReplaceText("braf_report_no", comprehensiveColonCancerProfileResult.BRAFV600EKTestOrder.ReportNo);
}
else
{
this.DeleteRow("braf_result");
}
if (comprehensiveColonCancerProfileResult.KRASExon23MutationIsOrdered == true)
{
base.ReplaceText("kras23_result", comprehensiveColonCancerProfileResult.KRASExon23MutationTestOrder.Result);
base.ReplaceText("kras23_report_no", comprehensiveColonCancerProfileResult.KRASExon23MutationTestOrder.ReportNo);
}
else
{
this.DeleteRow("kras23_result");
}
if (comprehensiveColonCancerProfileResult.KRASExon4MutationIsOrdered == true)
{
base.ReplaceText("kras4_result", comprehensiveColonCancerProfileResult.KRASExon4MutationTestOrder.Result);
base.ReplaceText("kras4_report_no", comprehensiveColonCancerProfileResult.KRASExon4MutationTestOrder.ReportNo);
}
else
{
this.DeleteRow("kras4_result");
}
if (comprehensiveColonCancerProfileResult.NRASMutationAnalysisIsOrdered == true)
{
base.ReplaceText("nras_result", comprehensiveColonCancerProfileResult.NRASMutationAnalysisTestOrder.Result);
base.ReplaceText("nras_report_no", comprehensiveColonCancerProfileResult.NRASMutationAnalysisTestOrder.ReportNo);
}
else
{
this.DeleteRow("nras_result");
}
*/
base.ReplaceText("pathologist_signature", comprehensiveColonCancerProfile.Signature);
this.SaveReport();
}
public override void ToXml(XElement document)
{
ComprehensiveColonCancerProfile comprehensiveColonCancerProfile = (ComprehensiveColonCancerProfile)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(this.m_ReportNo);
ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult = new ComprehensiveColonCancerProfileResult(this.m_AccessionOrder, comprehensiveColonCancerProfile);
this.AddHeader(document, comprehensiveColonCancerProfile, "Comprehensive Colon Cancer Profile");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Interpretation:", document, "F");
this.HandleLongString(comprehensiveColonCancerProfile.Interpretation, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Pathologist: " + comprehensiveColonCancerProfile.Signature, document, "F");
if (comprehensiveColonCancerProfile.FinalTime.HasValue == true)
{
this.AddNextObxElement("E-signed " + comprehensiveColonCancerProfile.FinalTime.Value.ToString("MM/dd/yyyy HH:mm"), document, "F");
}
this.AddNextObxElement("", document, "F");
this.AddAmendments(document);
foreach (YellowstonePathology.Business.Test.Surgical.SurgicalSpecimen surgicalSpecimen in comprehensiveColonCancerProfileResult.SurgicalSpecimenCollection)
{
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrder(surgicalSpecimen.SpecimenOrderId);
StringBuilder specimenDescription = new StringBuilder();
specimenDescription.Append(specimenOrder.Description + ": ");
foreach (YellowstonePathology.Business.Test.AliquotOrder aliquotOrder in specimenOrder.AliquotOrderCollection)
{
specimenDescription.Append(aliquotOrder.Label + ", ");
}
specimenDescription.Remove(specimenDescription.Length - 2, 2);
this.AddNextObxElement("Specimen:", document, "F");
this.HandleLongString(specimenDescription.ToString(), document, "F");
this.AddNextObxElement("", document, "F");
this.HandleLongString("Diagnosis:", document, "F");
this.HandleLongString(surgicalSpecimen.Diagnosis, document, "F");
this.AddNextObxElement("", document, "F");
}
this.HandleLongString("AJCC Pathologic Staging:", document, "F");
this.HandleLongString(comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.AJCCStage, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Reference Report: " + comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Mismatch Repair Protein Expression by Immunohistochemistry: ", document, "F");
if (comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHCCollection.Count > 0)
{
foreach (YellowstonePathology.Business.Test.LynchSyndrome.PanelSetOrderLynchSyndromeIHC testOrder in comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHCCollection)
{
this.AddNextObxElement("MLH1: " + testOrder.MLH1Result, document, "F");
this.AddNextObxElement("PMS2: " + testOrder.PMS2Result, document, "F");
this.AddNextObxElement("MSH2: " + testOrder.MSH2Result, document, "F");
this.AddNextObxElement("MSH6: " + testOrder.MSH6Result, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
}
else
{
this.AddNextObxElement("MLH1: " + "Not Included", document, "F");
this.AddNextObxElement("PMS2: " + "Not Included", document, "F");
this.AddNextObxElement("MSH2: " + "Not Included", document, "F");
this.AddNextObxElement("MSH6: " + "Not Included", document, "F");
this.AddNextObxElement("", document, "F");
}
this.AddNextObxElement("Molecular Analysis", document, "F");
if (comprehensiveColonCancerProfileResult.MolecularTestOrderCollection.Count > 0)
{
foreach (YellowstonePathology.Business.Test.PanelSetOrder testOrder in comprehensiveColonCancerProfileResult.MolecularTestOrderCollection)
{
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimen = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(testOrder.OrderedOnId);
YellowstonePathology.Business.Test.AliquotOrder aliquot = specimen.AliquotOrderCollection.GetByAliquotOrderId(testOrder.OrderedOnId);
if (testOrder is LynchSyndrome.PanelSetOrderMLH1MethylationAnalysis)
{
this.AddNextObxElement("MLH1 Promoter Methylation Analysis: " + ((LynchSyndrome.PanelSetOrderMLH1MethylationAnalysis)testOrder).Result, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
else if (testOrder is KRASStandard.KRASStandardTestOrder)
{
this.AddNextObxElement("KRAS Mutation Analysis: " + ((KRASStandard.KRASStandardTestOrder)testOrder).Result, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
else if (testOrder is KRASExon23Mutation.KRASExon23MutationTestOrder)
{
this.AddNextObxElement("KRAS Exon 23 Mutation Analysis: " + ((KRASExon23Mutation.KRASExon23MutationTestOrder)testOrder).Result, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
else if (testOrder is KRASExon4Mutation.KRASExon4MutationTestOrder)
{
this.AddNextObxElement("KRAS Exon 4 Mutation Analysis: " + ((KRASExon4Mutation.KRASExon4MutationTestOrder)testOrder).Result, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
else if (testOrder is BRAFV600EK.BRAFV600EKTestOrder)
{
this.AddNextObxElement("BRAF V600E Mutation Analysis: " + ((BRAFV600EK.BRAFV600EKTestOrder)testOrder).Result, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
else if (testOrder is NRASMutationAnalysis.NRASMutationAnalysisTestOrder)
{
this.AddNextObxElement("NRAS Mutation Analysis: " + ((NRASMutationAnalysis.NRASMutationAnalysisTestOrder)testOrder).Result, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
else if (testOrder is RASRAFPanel.RASRAFPanelTestOrder)
{
this.AddNextObxElement("KRAS Mutation Analysis: " + ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).KRASResult, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("BRAF V600E/K Mutation Analysis: " + ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).BRAFResult, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("NRAS Mutation Analysis: " + ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).NRASResult, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("HRAS Mutation Analysis: " + ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).HRASResult, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
}
}
else
{
this.AddNextObxElement("None Performed", document, "F");
this.AddNextObxElement("", document, "F");
}
}
private void SetIHC(ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult)
{
XmlNode tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='mlh1_result']", this.m_NameSpaceManager);
XmlNode rowmlh1Node = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='mlh1_result']", this.m_NameSpaceManager);
XmlNode rowmsh2Node = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='msh2_result']", this.m_NameSpaceManager);
XmlNode rowmsh6Node = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='msh6_result']", this.m_NameSpaceManager);
XmlNode rowpms2Node = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='pms2_result']", this.m_NameSpaceManager);
XmlNode insertAfterRow = rowmlh1Node;
foreach (YellowstonePathology.Business.Test.LynchSyndrome.PanelSetOrderLynchSyndromeIHC testOrder in comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHCCollection)
{
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = null;
if (testOrder.MasterAccessionNo == this.m_AccessionOrder.MasterAccessionNo)
{
specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(testOrder.OrderedOnId);
}
else
{
YellowstonePathology.Business.Test.AccessionOrder lseIHCAccessionOrder = Business.Persistence.DocumentGateway.Instance.GetAccessionOrderByMasterAccessionNo(testOrder.MasterAccessionNo);
specimenOrder = lseIHCAccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(testOrder.OrderedOnId);
}
YellowstonePathology.Business.Test.AliquotOrder aliquotOrder = specimenOrder.AliquotOrderCollection.GetByAliquotOrderId(testOrder.OrderedOnId);
YellowstonePathology.Business.Test.LynchSyndrome.IHCResult ihcResult = YellowstonePathology.Business.Test.LynchSyndrome.IHCResult.CreateResultFromResultCode(testOrder.ResultCode);
XmlNode rowmlh1NodeClone = rowmlh1Node.Clone();
rowmlh1NodeClone.SelectSingleNode("descendant::w:r[w:t='mlh1_result']/w:t", this.m_NameSpaceManager).InnerText = ihcResult.MLH1Result.Description;
rowmlh1NodeClone.SelectSingleNode("descendant::w:r[w:t='ihc_reportno']/w:t", this.m_NameSpaceManager).InnerText = testOrder.ReportNo;
rowmlh1NodeClone.SelectSingleNode("descendant::w:r[w:t='ihc_block_label']/w:t", this.m_NameSpaceManager).InnerText = aliquotOrder.Label;
tableNode.InsertAfter(rowmlh1NodeClone, insertAfterRow);
XmlNode rowpms2NodeClone = rowpms2Node.Clone();
rowpms2NodeClone.SelectSingleNode("descendant::w:r[w:t='pms2_result']/w:t", this.m_NameSpaceManager).InnerText = ihcResult.PMS2Result.Description;
tableNode.InsertAfter(rowpms2NodeClone, rowmlh1NodeClone);
XmlNode rowmsh2NodeClone = rowmsh2Node.Clone();
rowmsh2NodeClone.SelectSingleNode("descendant::w:r[w:t='msh2_result']/w:t", this.m_NameSpaceManager).InnerText = ihcResult.MSH2Result.Description;
tableNode.InsertAfter(rowmsh2NodeClone, rowpms2NodeClone);
XmlNode rowmsh6NodeClone = rowmsh6Node.Clone();
rowmsh6NodeClone.SelectSingleNode("descendant::w:r[w:t='msh6_result']/w:t", this.m_NameSpaceManager).InnerText = ihcResult.MSH6Result.Description;
tableNode.InsertAfter(rowmsh6NodeClone, rowmsh2NodeClone);
insertAfterRow = rowmsh6NodeClone;
}
if (comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHCCollection.Count > 0)
{
this.DeleteRow("mlh1_result");
this.DeleteRow("msh2_result");
this.DeleteRow("msh6_result");
this.DeleteRow("pms2_result");
}
else
{
base.ReplaceText("ihc_reportno", "Not Included");
base.ReplaceText("mlh1_result", "Not Included");
base.ReplaceText("msh2_result", "Not Included");
base.ReplaceText("msh6_result", "Not Included");
base.ReplaceText("pms2_result", "Not Included");
}
}
private void SetMolecularResults(ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult)
{
XmlNode tableNode = null;
XmlNode rowResultNode = null;
XmlNode insertAfterRow = null;
foreach (YellowstonePathology.Business.Test.PanelSetOrder testOrder in comprehensiveColonCancerProfileResult.MolecularTestOrderCollection)
{
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimen = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(testOrder.OrderedOnId);
YellowstonePathology.Business.Test.AliquotOrder aliquot = specimen.AliquotOrderCollection.GetByAliquotOrderId(testOrder.OrderedOnId);
if (testOrder is LynchSyndrome.PanelSetOrderMLH1MethylationAnalysis)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='mlh1promoter_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='mlh1promoter_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("mlh1promoter", ((LynchSyndrome.PanelSetOrderMLH1MethylationAnalysis)testOrder).Result, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
else if (testOrder is KRASStandard.KRASStandardTestOrder)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("kras", ((KRASStandard.KRASStandardTestOrder)testOrder).Result, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
else if (testOrder is KRASExon23Mutation.KRASExon23MutationTestOrder)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("kras", ((KRASExon23Mutation.KRASExon23MutationTestOrder)testOrder).Result, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
else if (testOrder is KRASExon4Mutation.KRASExon4MutationTestOrder)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("kras", ((KRASExon4Mutation.KRASExon4MutationTestOrder)testOrder).Result, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
else if (testOrder is BRAFV600EK.BRAFV600EKTestOrder)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='braf_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='braf_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("braf", ((BRAFV600EK.BRAFV600EKTestOrder)testOrder).Result, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
else if (testOrder is NRASMutationAnalysis.NRASMutationAnalysisTestOrder)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='nras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='nras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("nras", ((NRASMutationAnalysis.NRASMutationAnalysisTestOrder)testOrder).Result, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
else if (testOrder is RASRAFPanel.RASRAFPanelTestOrder)
{
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='kras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("kras", ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).KRASResult, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='braf_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='braf_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("braf", ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).BRAFResult, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='nras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='nras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("nras", ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).NRASResult, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='hras_result']", this.m_NameSpaceManager);
rowResultNode = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='hras_result']", this.m_NameSpaceManager);
insertAfterRow = rowResultNode;
this.SetTestResults("hras", ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).HRASResult, testOrder.ReportNo, aliquot.Label, tableNode, rowResultNode, insertAfterRow);
}
}
this.DeleteRow("mlh1promoter_result");
this.DeleteRow("braf_result");
this.DeleteRow("kras_result");
this.DeleteRow("nras_result");
this.DeleteRow("hras_result");
if (comprehensiveColonCancerProfileResult.MolecularTestOrderCollection.Count > 0)
{
this.DeleteRow("None Performed");
}
}
public override void ToXml(XElement document)
{
ComprehensiveColonCancerProfile comprehensiveColonCancerProfile = (ComprehensiveColonCancerProfile)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(this.m_ReportNo);
ComprehensiveColonCancerProfileResult comprehensiveColonCancerProfileResult = new ComprehensiveColonCancerProfileResult(this.m_AccessionOrder, comprehensiveColonCancerProfile);
this.AddHeader(document, comprehensiveColonCancerProfile, "Comprehensive Colon Cancer Profile");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Interpretation:", document, "F");
this.HandleLongString(comprehensiveColonCancerProfile.Interpretation, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Pathologist: " + comprehensiveColonCancerProfile.Signature, document, "F");
if (comprehensiveColonCancerProfile.FinalTime.HasValue == true)
{
this.AddNextObxElement("E-signed " + comprehensiveColonCancerProfile.FinalTime.Value.ToString("MM/dd/yyyy HH:mm"), document, "F");
}
this.AddNextObxElement("", document, "F");
this.AddAmendments(document);
foreach(YellowstonePathology.Business.Test.Surgical.SurgicalSpecimen surgicalSpecimen in comprehensiveColonCancerProfileResult.SurgicalSpecimenCollection)
{
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrder(surgicalSpecimen.SpecimenOrderId);
StringBuilder specimenDescription = new StringBuilder();
specimenDescription.Append(specimenOrder.Description + ": ");
foreach (YellowstonePathology.Business.Test.AliquotOrder aliquotOrder in specimenOrder.AliquotOrderCollection)
{
specimenDescription.Append(aliquotOrder.Label + ", ");
}
specimenDescription.Remove(specimenDescription.Length - 2, 2);
this.AddNextObxElement("Specimen:", document, "F");
this.HandleLongString(specimenDescription.ToString(), document, "F");
this.AddNextObxElement("", document, "F");
this.HandleLongString("Diagnosis:", document, "F");
this.HandleLongString(surgicalSpecimen.Diagnosis, document, "F");
this.AddNextObxElement("", document, "F");
}
this.HandleLongString("AJCC Pathologic Staging:", document, "F");
this.HandleLongString(comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.AJCCStage, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Reference Report: " + comprehensiveColonCancerProfileResult.PanelSetOrderSurgical.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("Mismatch Repair Protein Expression by Immunohistochemistry: ", document, "F");
if (comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHCCollection.Count > 0)
{
foreach (YellowstonePathology.Business.Test.LynchSyndrome.PanelSetOrderLynchSyndromeIHC testOrder in comprehensiveColonCancerProfileResult.PanelSetOrderLynchSyndromeIHCCollection)
{
this.AddNextObxElement("MLH1: " + testOrder.MLH1Result, document, "F");
this.AddNextObxElement("MSH2: " + testOrder.MSH2Result, document, "F");
this.AddNextObxElement("MSH6: " + testOrder.MSH6Result, document, "F");
this.AddNextObxElement("PMS2: " + testOrder.PMS2Result, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
}
else
{
this.AddNextObxElement("MLH1: " + "Not Included", document, "F");
this.AddNextObxElement("MSH2: " + "Not Included", document, "F");
this.AddNextObxElement("MSH6: " + "Not Included", document, "F");
this.AddNextObxElement("PMS2: " + "Not Included", document, "F");
this.AddNextObxElement("", document, "F");
}
this.AddNextObxElement("Molecular Analysis", document, "F");
if (comprehensiveColonCancerProfileResult.MolecularTestOrderCollection.Count > 0)
{
foreach (YellowstonePathology.Business.Test.PanelSetOrder testOrder in comprehensiveColonCancerProfileResult.MolecularTestOrderCollection)
{
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimen = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(testOrder.OrderedOnId);
YellowstonePathology.Business.Test.AliquotOrder aliquot = specimen.AliquotOrderCollection.GetByAliquotOrderId(testOrder.OrderedOnId);
if (testOrder is LynchSyndrome.PanelSetOrderMLH1MethylationAnalysis)
{
this.AddNextObxElement("MLH1 Promoter Methylation Analysis: " + ((LynchSyndrome.PanelSetOrderMLH1MethylationAnalysis)testOrder).Result, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
else if (testOrder is KRASStandard.KRASStandardTestOrder)
{
this.AddNextObxElement("KRAS Mutation Analysis: " + ((KRASStandard.KRASStandardTestOrder)testOrder).Result, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
else if (testOrder is KRASExon23Mutation.KRASExon23MutationTestOrder)
{
this.AddNextObxElement("KRAS Exon 23 Mutation Analysis: " + ((KRASExon23Mutation.KRASExon23MutationTestOrder)testOrder).Result, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
else if (testOrder is KRASExon4Mutation.KRASExon4MutationTestOrder)
{
this.AddNextObxElement("KRAS Exon 4 Mutation Analysis: " + ((KRASExon4Mutation.KRASExon4MutationTestOrder)testOrder).Result, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
else if (testOrder is BRAFV600EK.BRAFV600EKTestOrder)
{
this.AddNextObxElement("BRAF V600E Mutation Analysis: " + ((BRAFV600EK.BRAFV600EKTestOrder)testOrder).Result, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
else if (testOrder is NRASMutationAnalysis.NRASMutationAnalysisTestOrder)
{
this.AddNextObxElement("NRAS Mutation Analysis: " + ((NRASMutationAnalysis.NRASMutationAnalysisTestOrder)testOrder).Result, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
else if (testOrder is RASRAFPanel.RASRAFPanelTestOrder)
{
this.AddNextObxElement("KRAS Mutation Analysis: " + ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).KRASResult, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("BRAF V600E/K Mutation Analysis: " + ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).BRAFResult, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("NRAS Mutation Analysis: " + ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).NRASResult, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
this.AddNextObxElement("HRAS Mutation Analysis: " + ((RASRAFPanel.RASRAFPanelTestOrder)testOrder).HRASResult, document, "F");
this.AddNextObxElement("Specimen: " + aliquot.Label, document, "F");
this.AddNextObxElement("Reference Report: " + testOrder.ReportNo, document, "F");
this.AddNextObxElement("", document, "F");
}
}
}
else
{
this.AddNextObxElement("None Performed", document, "F");
this.AddNextObxElement("", document, "F");
}
}
