public ARCHETYPE VisitArchetype(ARCHETYPE archetype)
        {
            ARCHETYPE result = new ARCHETYPE();

            result.adl_version = archetype.adl_version;
            result.archetype_id = archetype.archetype_id;
            result.concept = archetype.concept;
            result.definition = VisitComplexObjectConstraint(archetype.definition);
            result.invariants = archetype.invariants;

            if (archetype.is_controlledSpecified)
            {
                result.is_controlled = archetype.is_controlled;
                result.is_controlledSpecified = true;
            }

            result.ontology = VisitOntology(archetype.ontology);
            result.original_language = archetype.original_language;
            result.parent_archetype_id = archetype.parent_archetype_id;
            result.revision_history = archetype.revision_history;
            result.translations = VisitTranslations(archetype.translations);
            result.uid = archetype.uid;

            return result;
        }
Example #2
0
        public Ontology(ARCHETYPE an_archetype)
        {
            _archetype = an_archetype;

            if (languageCode == null || !AvailableLanguages().Contains(languageCode))
                languageCode = an_archetype.original_language.code_string;
        }
        public static string ArchetypeDigest(ARCHETYPE archetype)
        {
            var settings = new XmlWriterSettings
            {
                Encoding = Encoding.UTF8,
                OmitXmlDeclaration = true,
                Indent = false
            };

            //#if DEBUG
            //            using (var writer = XmlWriter.Create(@".\CanonicalArchetype2.xml", new XmlWriterSettings { Indent = true }))
            //                AmSerializer.Serialize(writer, archetype);
            //#endif

            byte[] data;

            using (MemoryStream stream = AmSerializer.Serialize(settings, archetype))
            {
#if XMLParser
                AmSerializer.ValidateArchetype(stream);
#endif
                data = stream.ToArray();
            }

            // Remove UTF-8 BOM 
            int offset = 0;

            if (data.Length < 1)
                throw new ApplicationException("Canonical archetype model must have length greater than 0");

            if (data[0] == 239) // UTF-8 BOM: EF BB BF (239 187 191)
            {
                offset = 3;

                if (data.Length <= offset)
                    throw new ApplicationException("Canonical archetype model must have length greater than the BOM offset");
            }

            if (data[offset] != 60) // XML root element (<)
                throw new ApplicationException("Unexpected start character of canonical archetype model");

            MD5 md5 = new MD5CryptoServiceProvider();
            SoapHexBinary hexEncoder = new SoapHexBinary(md5.ComputeHash(data, offset, data.Length - offset));
            return hexEncoder.ToString();
        }
        protected virtual ARCHETYPE CloneArchetypeDetails(openehr.openehr.am.archetype.ARCHETYPE archetype)
        {
            ARCHETYPE result = new ARCHETYPE();

            if (archetype.uid() != null)
            {
                HIER_OBJECT_ID uid = new HIER_OBJECT_ID();
                uid.value = archetype.uid().value().ToString();
                result.uid = uid;
            }

            if (archetype.archetype_id() != null)
            {
                ARCHETYPE_ID archetypeId = new ARCHETYPE_ID();
                archetypeId.value = archetype.archetype_id().value().ToString();
                result.archetype_id = archetypeId;
            }

            if (archetype.version() != null)
                result.adl_version = archetype.adl_version().ToString();

            if (archetype.concept() != null)
                result.concept = archetype.concept().ToString();

            result.original_language = CloneCodePhrase(archetype.original_language());
            result.is_controlled = archetype.is_controlled();

            if (archetype.parent_archetype_id() != null)
            {
                ARCHETYPE_ID parentId = new ARCHETYPE_ID();
                parentId.value = archetype.parent_archetype_id().value().ToString();
                result.parent_archetype_id = parentId;
            }

            result.description = CloneDescription(archetype.description());
            result.ontology = CloneOntology(archetype.ontology());

            // 0..1 revision_history REVISION_HISTORY (does not occur in NHS archetypes, do later)
            //if (archetype.revision_history() != null)
            // result.revision_history = CloneAuthoredResource(archetype.revision_history());

            if (archetype.translations() != null && archetype.translations().count() >= 0)
            {
                TRANSLATION_DETAILS[] translations = new TRANSLATION_DETAILS[archetype.translations().count()];
                archetype.translations().start();

                for (int i = 1; i <= archetype.translations().count(); i++)
                {
                    TRANSLATION_DETAILS translation = new TRANSLATION_DETAILS();
                    openehr.openehr.rm.common.resource.TRANSLATION_DETAILS td = archetype.translations().item_for_iteration() as openehr.openehr.rm.common.resource.TRANSLATION_DETAILS;

                    if (td.accreditation() != null)
                        translation.accreditation = td.accreditation().ToString();

                    translation.author = CloneHashTableAny(td.author());
                    translation.language = CloneCodePhrase(td.language());
                    translation.other_details = CloneHashTableAny(td.other_details());
                    translations[i - 1] = translation;

                    archetype.translations().forth();
                }

                result.translations = translations;
            }

            result.invariants = CloneAssertion(archetype.invariants());

            return result;
        }
Example #5
0
        public static bool ValidateArchetype(ARCHETYPE archetype)
        {
            XmlWriterSettings settings = new XmlWriterSettings();
            settings.Encoding = Encoding.UTF8;
            settings.OmitXmlDeclaration = true;
            settings.Indent = false;

            MemoryStream stream = Serialize(settings, archetype);
            AmSerializer.ValidateArchetype(stream);
            return true;
        }
Example #6
0
        public static MemoryStream Serialize(XmlWriterSettings settings, ARCHETYPE archetype)
        {
            MemoryStream result = new MemoryStream();

            if (settings != null)
                ArchetypeSerialiser.Serialize(XmlWriter.Create(result, settings), archetype);
            else
                ArchetypeSerialiser.Serialize(result, archetype);

            return result;
        }
Example #7
0
 public static void Serialize(XmlWriter writer, ARCHETYPE archetype)
 {
     ArchetypeSerialiser.Serialize(writer, archetype);
 }
 public static ARCHETYPE CanonicalArchetype(ARCHETYPE archetype)
 {
     return new CanonicalAmVisitor().VisitArchetype(archetype);
 }
        public void OpenFile(string a_file_name)
        {
            _open_file_error = false;
            _status = "";
            _archetype = null;
            _ontology = null;

            try
            {
                XmlReader xml_reader = XmlReader.Create(a_file_name);
                XmlSerializer xmlSerialiser = new XmlSerializer(typeof(ARCHETYPE));
				ARCHETYPE new_archetype = xmlSerialiser.Deserialize(xml_reader) as ARCHETYPE;
                xml_reader.Close();

				_archetype = new_archetype;
                _ontology = null;
            }
            catch (Exception e)
            {
                _open_file_error = true;
                _status = "Open file error: " + e;
                System.Diagnostics.Debug.Assert(false, e.ToString());
            }
        }
        public void NewArchetype(string an_archetypeID, string a_languageCode, string defaultLanguageCodeSet)
        {
            _archetype = new ARCHETYPE();
            _ontology = null;
            
            ARCHETYPE_ID archetypeId = new ARCHETYPE_ID();
            archetypeId.value = an_archetypeID;
            _archetype.archetype_id = archetypeId;            
            _archetype.description = new RESOURCE_DESCRIPTION();
            _archetype.original_language = new CODE_PHRASE();
            _archetype.original_language.code_string = a_languageCode;
            
            if (defaultLanguageCodeSet != "")
            {
                TERMINOLOGY_ID terminologyId = new TERMINOLOGY_ID();
                terminologyId.value = defaultLanguageCodeSet;
                _archetype.original_language.terminology_id = terminologyId;
            }
            
            _archetype.description.lifecycle_state = "AuthorDraft";
            _archetype.concept = "at0000";
            _archetype.definition = new C_COMPLEX_OBJECT();
            _archetype.definition.node_id = _archetype.concept;
            string[] y = an_archetypeID.Split(".-".ToCharArray());
            _archetype.definition.rm_type_name = y[2];
            _archetype.ontology = new ARCHETYPE_ONTOLOGY();
            _archetype.ontology.term_definitions = Array.CreateInstance(typeof(CodeDefinitionSet), 1) as CodeDefinitionSet[];
            _archetype.ontology.term_definitions[0] = new CodeDefinitionSet();
            _archetype.ontology.term_definitions[0].language = a_languageCode;
            _archetype.ontology.term_definitions[0].items = Array.CreateInstance(typeof(ARCHETYPE_TERM), 1) as ARCHETYPE_TERM[];
            _archetype.ontology.term_definitions[0].items[0] = new ARCHETYPE_TERM();
            _archetype.ontology.term_definitions[0].items[0].code = "at0000";
            _archetype.ontology.term_definitions[0].items[0].items = Array.CreateInstance(typeof(StringDictionaryItem), 2) as StringDictionaryItem[];
            _archetype.ontology.term_definitions[0].items[0].items[0] = new StringDictionaryItem();
            _archetype.ontology.term_definitions[0].items[0].items[0].id = "text";
            _archetype.ontology.term_definitions[0].items[0].items[0].Value = "?";
            _archetype.ontology.term_definitions[0].items[0].items[1] = new StringDictionaryItem();
            _archetype.ontology.term_definitions[0].items[0].items[1].id = "description";
            _archetype.ontology.term_definitions[0].items[0].items[1].Value = "*";

            AddDescriptionItem(_archetype.original_language);
        }