public NeoSearchTask() : base(MyTask.Neo)
{
NeoParameters = new NeoParameters();
var tempDigParams = new DigestionParams(protease: "non-specific", maxMissedCleavages: 12, minPeptideLength: 8, maxPeptideLength: 13);
CommonParameters = new CommonParameters(
digestionParams: tempDigParams,
doPrecursorDeconvolution: false,
precursorMassTolerance: new PpmTolerance(double.MaxValue),
productMassTolerance: new PpmTolerance(double.MaxValue));
}
public NeoSearchTask() : base(MyTask.Neo)
{
NeoParameters = new NeoParameters();
IDigestionParams tempDigParams = new DigestionParams
{
MinPeptideLength = 8,
MaxPeptideLength = 13,
Protease = GlobalVariables.ProteaseDictionary["non-specific"],
MaxMissedCleavages = 12
};
CommonParameters = new CommonParameters
{
DigestionParams = tempDigParams,
DoPrecursorDeconvolution = false,
PrecursorMassTolerance = null,
ProductMassTolerance = null
};
}
