override public void getLogYY(model m, dataSeq x, int i, ref dMatrix YY, ref List <double> Y, bool takeExp, bool mask)
{
YY.set(0);
listTool.listSet(ref Y, 0);
float[] w = m.W;
List <featureTemp> fList = _fGene.getFeatureTemp(x, i);
int nState = m.NState;
foreach (featureTemp ft in fList)
{
for (int s = 0; s < nState; s++)
{
int f = _fGene.getNodeFeatID(ft.id, s);
Y[s] += w[f] * ft.val;
}
}
if (i > 0)
{
foreach (featureTemp im in fList)
{
for (int s = 0; s < nState; s++)
{
for (int sPre = 0; sPre < nState; sPre++)
{
int f = _fGene.getEdgeFeatID(im.id, sPre, s);
YY[sPre, s] += w[f] * im.val;
}
}
}
}
double maskValue = double.MinValue;
if (takeExp)
{
listTool.listExp(ref Y);
YY.eltExp();
maskValue = 0;
}
if (mask)
{
dMatrix statesPerNodes = m.getStatesPerNode(x);
for (int s = 0; s < Y.Count; s++)
{
if (statesPerNodes[i, s] == 0)
{
Y[s] = maskValue;
}
}
}
}
public void getYYandY(model m, dataSeq x, List <dMatrix> YYlist, List <List <double> > Ylist, List <dMatrix> maskYYlist, List <List <double> > maskYlist)
{
int nNodes = x.Count;
//int nTag = m.NTag;
int nState = m.NState;
double[] dAry = new double[nState];
bool mask = false;
try
{
//Global.rwlock.AcquireReaderLock(Global.readWaitTime);
for (int i = 0; i < nNodes; i++)
{
dMatrix YYi = new dMatrix(nState, nState);
List <double> Yi = new List <double>(dAry);
//compute the Mi matrix
getLogYY(m, x, i, ref YYi, ref Yi, false, mask);
YYlist.Add(YYi);
Ylist.Add(Yi);
maskYYlist.Add(new dMatrix(YYi));
maskYlist.Add(new List <double>(Yi));
}
//Global.rwlock.ReleaseReaderLock();
}
catch (ApplicationException)
{
Console.WriteLine("read out time!");
}
//get the masked YY and Y
double maskValue = double.MinValue;
dMatrix statesPerNodes = m.getStatesPerNode(x);
for (int i = 0; i < nNodes; i++)
{
List <double> Y = maskYlist[i];
List <int> tagList = x.getTags();
for (int s = 0; s < Y.Count; s++)
{
if (statesPerNodes[i, s] == 0)
{
Y[s] = maskValue;
}
}
}
}
public void getLogYY(model m, dataSeq x, int i, ref dMatrix YY, ref List <double> Y, bool takeExp, bool mask)
{
YY.set(0);
listTool.listSet(ref Y, 0);
float[] w = m.W;
List <featureTemp> fList = _fGene.getFeatureTemp(x, i);
int nTag = m.NTag;
//node feature
foreach (featureTemp im in fList)
{
nodeFeature[] features = Global.idNodeFeatures[im.id];
foreach (nodeFeature feat in features)
{
int f = feat._id;
int s = feat._s;
Y[s] += w[f] * im.val;
}
}
if (i > 0)
{
//non-rich edge
if (Global.useTraditionalEdge)
{
for (int s = 0; s < nTag; s++)
{
for (int sPre = 0; sPre < nTag; sPre++)
{
int f = _fGene.getEdgeFeatID(sPre, s);
YY[sPre, s] += w[f];
}
}
}
//rich edge
foreach (featureTemp im in fList)
{
edgeFeature[] features = Global.idEdgeFeatures[im.id];
foreach (edgeFeature feat in features)
{
YY[feat._sPre, feat._s] += w[feat._id] * im.val;
}
}
//rich2
if (Global.richFeat2)
{
List <featureTemp> fList2 = _fGene.getFeatureTemp(x, i - 1);
foreach (featureTemp im in fList2)
{
edgeFeature[] features = Global.idEdgeFeatures2[im.id];
foreach (edgeFeature feat in features)
{
YY[feat._sPre, feat._s] += w[feat._id] * im.val;
}
}
}
}
double maskValue = double.MinValue;
if (takeExp)
{
listTool.listExp(ref Y);
YY.eltExp();
maskValue = 0;
}
if (mask)
{
dMatrix statesPerNodes = m.getStatesPerNode(x);
for (int s = 0; s < Y.Count; s++)
{
if (statesPerNodes[i, s] == 0)
{
Y[s] = maskValue;
}
}
}
}