Example #1
0
        /// <summary> Clones this <code>RingSet</code> including the Rings.
        ///
        /// </summary>
        /// <returns>  The cloned object
        /// </returns>
        public override System.Object Clone()
        {
            RingSet clone = (RingSet)base.Clone();

            IAtomContainer[] result = AtomContainers;
            for (int i = 0; i < result.Length; i++)
            {
                clone.addAtomContainer((IAtomContainer)result[i].Clone());
            }
            return(clone);
        }
Example #2
0
        /// <summary> Returns a vector of all rings that this atom is part of.
        ///
        /// </summary>
        /// <param name="atom"> The atom to be checked
        /// </param>
        /// <returns>   A vector of all rings that this bond is part of
        /// </returns>

        public virtual IRingSet getRings(IAtom atom)
        {
            IRingSet rings = new RingSet();
            IRing    ring;

            for (int i = 0; i < AtomContainerCount; i++)
            {
                ring = (Ring)getAtomContainer(i);
                if (ring.contains(atom))
                {
                    rings.addAtomContainer(ring);
                }
            }
            return(rings);
        }