Example #1
0
        /// <summary>
        /// Process one or more .NCC Review measurement data files, with related .NOP/.COP files.
        /// see Import Operator Declarations from Operator Review and Measurements from Radiation Review p. 24,
        /// See Operator Declaration File Format p. 87, 
        /// See Operator Declaration File Format for Curium Ratio Measurements p. 88, 
        /// See Radiation Review Measurement Data File Format p. 93, INCC Software Users Manual, March 29, 2009
        /// </summary>
        void INCCReviewFileProcessing()
        {

            FireEvent(EventType.ActionPrep, this);
            NC.App.Opstate.StampOperationStartTime();
            // This code would be the same for an interactive version of this operation
            //  > Start here
            // first find and process and .NOP files 
            List<string> exts = new List<string>() { ".nop", ".cop" };
            FileList<CSVFile> hdlr = new FileList<CSVFile>();
            hdlr.Init(exts, ctrllog);
            FileList<CSVFile> files = null;

            // The INCC5 semantics
            if (NC.App.AppContext.FileInputList == null)
                files = (FileList<CSVFile>)hdlr.BuildFileList(NC.App.AppContext.FileInput, NC.App.AppContext.Recurse, true);
            else
                files = (FileList<CSVFile>)hdlr.BuildFileList(NC.App.AppContext.FileInputList);

            // construct lists of isotopics and items from the NOP and COP files
            OPFiles opfiles = new OPFiles();
            opfiles.Process(files);

            ctrllog.TraceEvent(LogLevels.Verbose, 33085, "NOP items " + opfiles.NOPItemIds.Count);

            // process the NCC files only
            INCCFileOrFolderInfo foo = new INCCFileOrFolderInfo(ctrllog, "*.NCC");
            if (NC.App.AppContext.FileInputList == null)
                foo.SetPath(NC.App.AppContext.FileInput);
            else
                foo.SetFileList(NC.App.AppContext.FileInputList);
            List<INCCTransferBase> res = foo.Restore();
            // use RemoveAll to cull those NCC files that reference a non-existent detector
            DetectorList dl = NC.App.DB.Detectors;
            foreach (INCCReviewFile rf in res)
            {
                List<Detector> tdk = dl.FindAll(d => 0 == string.Compare(d.Id.DetectorName, rf.detector, true));
                if (tdk.Count < 1)
                {
                    rf.skip = true;
                    ctrllog.TraceEvent(LogLevels.Warning, 33085, "No detector " + rf.detector + " defined, cannot complete processing NCC review file " + System.IO.Path.GetFileName(rf.Path));
                }
            }
            res.RemoveAll(rf => (rf as INCCReviewFile).skip);
            res.Sort((rf1, rf2) => // sort chronologically
            {
                return DateTime.Compare((rf1 as INCCReviewFile).dt, (rf2 as INCCReviewFile).dt);
            });
            /// end here > The sorted, filtered and processed list here would be returned to the UI for display and interactive selection

            if (res == null || res.Count < 1)
            {
                NC.App.Opstate.StopTimer(0);
                NC.App.Opstate.StampOperationStopTime();
                FireEvent(EventType.ActionStop, this);
                ctrllog.TraceEvent(LogLevels.Warning, 33085, "No useable NCC review files found in " + System.IO.Path.GetFullPath(foo.GetPath()));
                return;
            }

            AcquireParameters orig_acq = new AcquireParameters(NC.App.Opstate.Measurement.AcquireState);

            // Each NCC file is a separate measurement 
            foreach (INCCReviewFile irf in res)
            {
                ResetMeasurement();
                if (NC.App.Opstate.IsQuitRequested)
                    break;
                // Find the detector named in the NCC file (existence shown in earlier processing above)
                Detector curdet = NC.App.DB.Detectors.Find(d => string.Compare(d.Id.DetectorName, irf.detector, true) == 0);

                // set up acquire state based on the NCC file content
                AcquireParameters newacq = ConfigureAcquireState(curdet, orig_acq, irf);

                AssaySelector.MeasurementOption mo = NCCMeasOption(irf);
                // make a temp MeasId
                MeasId thisone = new MeasId(mo, newacq.MeasDateTime);
                // get the list of measurement Ids for this detector
                List<MeasId> list = NC.App.DB.MeasurementIds(curdet.Id.DetectorName, mo.PrintName());
                MeasId already = list.Find(mid => mid.Equals(thisone));
                if (already != null)
                {
                    // URGENT: do the replacement as it says 
                    ctrllog.TraceEvent(LogLevels.Warning, 33085, "Replacing the matching {0} measurement, timestamp {1} (in a future release)", already.MeasOption.PrintName(), already.MeasDateTime.ToString());
                }

                IntegrationHelpers.BuildMeasurement(newacq, curdet, mo);
                Measurement meas = NC.App.Opstate.Measurement;
                meas.MeasDate = newacq.MeasDateTime; // use the date and time from the NCC file content      

                meas.Persist();  // preserve the basic results record
                if (AssaySelector.ForMass(meas.MeasOption) && !meas.INCCAnalysisState.Methods.AnySelected())
                    ctrllog.TraceEvent(LogLevels.Warning, 437, "No mass methods for " + meas.INCCAnalysisState.Methods.selector.ToString());

                try
                {

                    UInt16 total_number_runs = 0;
                    double run_count_time = 0;
                    double total_good_count_time = 0;

                    if (irf.num_runs == 0)
                    {
                        ctrllog.TraceEvent(LogLevels.Error, 440, "This measurement has no good cycles.");
                        continue;
                    }
                    if (meas.MeasOption == AssaySelector.MeasurementOption.holdup)
                        continue;

                    /* convert to total count time */
                    total_number_runs = irf.num_runs;
                    total_good_count_time = (double)irf.num_runs *
                        run_count_time;
                    meas.RequestedRepetitions = total_number_runs;

                    // convert runs to cycles
                    for (int i = 0; i < irf.num_runs; i++)
                    {
                        /* run date and time (IAEA format) */
                        AddReviewFileCycle(i, irf.runs[i], irf.times[i], meas, irf.Path);
                        if (i % 8 == 0)
                            FireEvent(EventType.ActionInProgress, this);
                    }
                    FireEvent(EventType.ActionInProgress, this);

                    // NEXT: handle true AAS cycles as in INCC5
                    if (meas.MeasOption == AssaySelector.MeasurementOption.verification &&
                        meas.INCCAnalysisState.Methods.Has(AnalysisMethod.AddASource) &&
                        meas.AcquireState.well_config == WellConfiguration.Passive)
                    {
                        ctrllog.TraceEvent(LogLevels.Error, 440, "No add-a-source data processed because I am lame. " + "AAS ");
                        //AddASourceSetup aass = IntegrationHelpers.GetCurrentAASSParams(meas.Detectors[0]);
                        //for (int n = 1; n <= aass.number_positions; n++)
                        //{
                        //    /* number of good runs */
                        //    string l = td.reader.ReadLine();
                        //    if (td.reader.EndOfStream)
                        //    {
                        //        ctrllog.TraceEvent(LogLevels.Error, 440, "No add-a-source data found in disk file. " + "AAS p" + n.ToString());

                        //    }
                        //}
                    }
                }
                catch (Exception e)
                {
                    NC.App.Opstate.SOH = NCC.OperatingState.Trouble;
                    ctrllog.TraceException(e, true);
                    ctrllog.TraceEvent(LogLevels.Error, 437, "NCC file processing stopped with error: '" + e.Message + "'");
                }
                finally
                {
                    NC.App.Loggers.Flush();
                }
                FireEvent(EventType.ActionInProgress, this);
                ComputeFromINCC5SRData(meas);
                FireEvent(EventType.ActionInProgress, this);
            }


            NC.App.Opstate.ResetTokens();
            NC.App.Opstate.SOH = NCC.OperatingState.Stopping;
            NC.App.Opstate.StampOperationStopTime();
            FireEvent(EventType.ActionStop, this);
        }
Example #2
0
        void INCCTransferFileProcessing()
        {
            FireEvent(EventType.ActionPrep, this);
            NC.App.Opstate.StampOperationStartTime();

            INCCFileOrFolderInfo foo = new INCCFileOrFolderInfo(ctrllog);
            if (NC.App.AppContext.FileInputList == null)
                foo.SetPath(NC.App.AppContext.FileInput);
            else
                foo.SetFileList(NC.App.AppContext.FileInputList);
            List<INCCTransferBase> res = foo.Restore();
            if (res != null)
            {
                // do the detectors and the methods first, then do the transfer files with the data and results
                res.Sort((itb1, itb2) =>
                {
                    if (itb1 is INCCInitialDataDetectorFile)
                        if (!(itb2 is INCCInitialDataDetectorFile))
                            return -1;
                        else
                            return 0;
                    if (itb1 is INCCInitialDataCalibrationFile)
                        if (itb2 is INCCInitialDataDetectorFile)
                            return 1;
                        else if (itb2 is INCCTransferFile)
                            return -1;
                        else
                            return 0;
                    if (itb1 is INCCTransferFile)
                        if (!(itb2 is INCCTransferFile))
                            return 1;
                        else
                            return 0;
                    return 0;
                });

                // the in-memory load now occurs 
                if (res.Count > 0)
                {
                    ctrllog.TraceInformation("=== Processing the intermediate transfer content");
                    int j = 1;
                    // when processing a detector, detector calib, and 1 or more transfer files in batch, the order is important.
                    bool modI = false, modC = false;
                    foreach (INCCTransferBase bar in res)
                    {
                        if (bar is INCCInitialDataDetectorFile)  // first in the list, define the detectors
                        {
                            INCCKnew k = new INCCKnew(ctrllog);
                            k.BuildDetector((INCCInitialDataDetectorFile)bar, j); j++;
                            modI = true;
                        }
                    }
                    if (modI) // detector files have these various related parameters, update the in-memory collection state and the database to reflect this
                    {
                        // DB create/update on all records
                        NC.App.DB.UpdateDetectors();
                        NC.App.DB.BackgroundParameters.SetMap();
                        NC.App.DB.UnattendedParameters.SetMap();  // created from scratch
                        NC.App.DB.NormParameters.SetMap();
                        NC.App.DB.AASSParameters.SetMap();
                        NC.App.DB.HVParameters.SetMap();
                    }
                    foreach (INCCTransferBase bar in res)
                    {
                        if (bar is INCCInitialDataCalibrationFile)   // second in the list, get the calib info attached to detectors
                        {
                            INCCKnew k = new INCCKnew(ctrllog);
                            k.BuildCalibration((INCCInitialDataCalibrationFile)bar, j); j++;
                            modC = true;
                        }
                    }
                    if (modC) // update the datbase with new material defs and method analysis parameters 
                    {
                        NC.App.DB.Materials.SetList(); NC.App.DB.Materials.Reset();   
                        NC.App.DB.UpdateAnalysisMethods();
                    }
                    foreach (INCCTransferBase bar in res)
                    {
                        if (bar is INCCTransferFile)   // third, after prep with detector data and calib, this is measurement data and results derived using detectors and thier calibration parameters.
                        {
                            INCCKnew k = new INCCKnew(ctrllog);
                            bool supercool = k.BuildMeasurement((INCCTransferFile)bar, j); j++;
                            if (!supercool)
                                continue;
                            if (NC.App.AppContext.Replay)
                                Replay(k.Meas, ConstructedSource.INCCTransfer);
                            else
                                PassThru(k.Meas);
                        }
                    }
                }

                NC.App.Opstate.SOH = NCC.OperatingState.Stopping;
                NC.App.Opstate.StampOperationStopTime();
                FireEvent(EventType.ActionStop, this);

            }
        }