public AnalysisViewModel(MultiAlignAnalysis analysis)
{
m_showDriftTime = false;
LoadDatasets(analysis);
// Create matching clusters and AMT Matches.
var matches = analysis.DataProviders.MassTagMatches.FindAll();
var clusters =
analysis.Clusters.MapMassTagsToClusters(matches, analysis.MassTagDatabase);
// Cache the clusters so that they can be readily accessible later on.
// This will help speed up performance, so that we dont have to hit the database
// when we want to find matching mass tags, and dont have to map clusters to tags multiple times.
FeatureCacheManager<UMCClusterLightMatched>.SetFeatures(clusters.Item1);
FeatureCacheManager<MassTagToCluster>.SetFeatures(clusters.Item2);
SingletonDataProviders.Providers = analysis.DataProviders;
// Create sub-view models
MassTags = new ObservableCollection<MassTagToCluster>(clusters.Item2);
ClusterTree = new UmcClusterCollectionTreeViewModel(clusters.Item1);
ClusterSpectraViewModel = new UmcClusterSpectraViewModel();
ClusterIdentificationViewModel = new UMCClusterIdentificationViewModel();
AnalysisOptionsViewModel = new AnalysisOptionsViewModel(analysis.Options);
ClusterViewModel = new ClusterDetailViewModel();
var charges = SingletonDataProviders.Providers.FeatureCache.RetrieveChargeStates();
GlobalStatisticsViewModel = new GlobalStatisticsViewModel(clusters.Item1, charges);
HasIdentifications = (MassTags.Count > 0);
SelectedClusterName = "Cluster Details:";
LoadClusters(clusters.Item1);
ApplyViewAsFilter = new BaseCommand(FilterFromView);
}
private void SetupViewModels(AnalysisConfig configuration)
{
m_config = configuration;
CurrentStep = AnalysisSetupStep.DatasetSelection;
CancelCommand = new AnalysisCancelCommand(this);
BackCommand = new AnalysisBackCommand(this);
NextCommand = new AnalysisNextCommand(this);
DatasetSelectionViewModel = new AnalysisDatasetSelectionViewModel(configuration.Analysis);
BaselineSelectionViewModel = new AnalysisBaselineSelectionViewModel(configuration.Analysis);
AnalysisNamingViewModel = new AnalysisNamingViewModel(configuration);
AnalysisOptionsViewModel = new AnalysisOptionsViewModel(configuration.Analysis.Options);
}
private void SetupViewModels(AnalysisConfig configuration)
{
m_config = configuration;
CurrentStep = AnalysisSetupStep.DatasetSelection;
CancelCommand = new AnalysisCancelCommand(this);
BackCommand = new AnalysisBackCommand(this);
NextCommand = new AnalysisNextCommand(this);
DatasetSelectionViewModel = new AnalysisDatasetSelectionViewModel(configuration.Analysis);
BaselineSelectionViewModel = new AnalysisBaselineSelectionViewModel(configuration.Analysis);
AnalysisNamingViewModel = new AnalysisNamingViewModel(configuration);
AnalysisOptionsViewModel = new AnalysisOptionsViewModel(configuration.Analysis.Options);
}