public ParameterCommand(Parameter parameter, Reaction parentReaction, Model.SBML.Model model)
{
this.parameter = parameter;
this.parentReaction = parentReaction;
this.model = model;
}
public void ParameterElement(Hashtable attrs)
{
Parameter parameter = new Parameter(attrs);
if (parameter.ID != null)
{
this.model.AddId(parameter.ID, parameter);
}
double value = 1d;
String units = null;
Boolean constant = true;
if (attrs.ContainsKey("value"))
value = Double.Parse((String)attrs["value"]);
if (attrs.ContainsKey("units"))
units = (String)attrs["units"];
if (attrs.ContainsKey("constant"))
constant = Boolean.Parse((String)attrs["constant"]);
parameter.AddProperties(value, units, constant);
if (elementStack.Count == 0)
// from top-level element <listOfParameters> under <model>
{
this.model.listOfParameters.Add(parameter);
}
else
// from <listOfParameters> under <kineticLaw> under <reaction>
{
KineticLaw kineticLaw = (KineticLaw)elementStack.Peek();
kineticLaw.listOfParameters.Add(parameter);
}
}