/// <summary>
/// Creates a new <see cref="Residue" /> object.
/// </summary>
/// <param name="molecule">The molecule this residue belongs to.</param>
/// <param name="atom">An atom in the residue. This is needed to obtain residue properties
/// since there is no corresponding PDB file record.</param>
internal Residue(Molecule molecule, Atom atom)
{
this.molecule = molecule;
this.molecule.ShowCartoonChanged += this.MoleculeShowCartoonChanged;
this.residueName = atom.ResidueName;
this.chainIdentifier = atom.ChainIdentifier;
this.residueSequenceNumber = atom.ResidueSequenceNumber;
this.atoms = new List <Atom>();
this.atoms.Add(atom);
this.residueIdentifier = Residue.GetResidueIdentifier(this.residueName);
this.residueColor = Residue.GetResidueColor(this.residueName);
this.structureColor = this.residueIdentifier != "O" ? Colors.LightGray : Colors.Red;
this.colorScheme = ColorScheme.Structure;
this.residueStripItems = new List <ResidueStripItem>();
foreach (char character in this.residueIdentifier)
{
ResidueStripItem residueStripItem = new ResidueStripItem(character.ToString());
residueStripItem.Residue = this;
this.residueStripItems.Add(residueStripItem);
}
this.model = new Model3DGroup();
this.UpdateColorView();
}
private void AddResidueStripItem(ResidueStripItem residueStripItem, int row, int column)
{
while (column >= this.totalColumnCount)
{
this.identifierGrid.ColumnDefinitions.Add(new ColumnDefinition());
this.totalColumnCount++;
}
residueStripItem.Size = new Size(ResidueControl.itemWidth, ResidueControl.itemHeight);
residueStripItem.SetValue(Grid.RowProperty, row);
residueStripItem.SetValue(Grid.ColumnProperty, column);
this.identifierGrid.Children.Add(residueStripItem);
}
/// <summary>
/// Creates a new <see cref="Residue" /> object.
/// </summary>
/// <param name="molecule">The molecule this residue belongs to.</param>
/// <param name="atom">An atom in the residue. This is needed to obtain residue properties
/// since there is no corresponding PDB file record.</param>
internal Residue(Molecule molecule, Atom atom)
{
this.molecule = molecule;
this.molecule.ShowCartoonChanged += this.MoleculeShowCartoonChanged;
this.residueName = atom.ResidueName;
this.chainIdentifier = atom.ChainIdentifier;
this.residueSequenceNumber = atom.ResidueSequenceNumber;
this.atoms = new List<Atom>();
this.atoms.Add(atom);
this.residueIdentifier = Residue.GetResidueIdentifier(this.residueName);
this.residueColor = Residue.GetResidueColor(this.residueName);
this.structureColor = this.residueIdentifier != "O" ? Colors.LightGray : Colors.Red;
this.colorScheme = ColorScheme.Structure;
this.residueStripItems = new List<ResidueStripItem>();
foreach (char character in this.residueIdentifier)
{
ResidueStripItem residueStripItem = new ResidueStripItem(character.ToString());
residueStripItem.Residue = this;
this.residueStripItems.Add(residueStripItem);
}
this.model = new Model3DGroup();
this.UpdateColorView();
}
private void AddResidueStripItem(ResidueStripItem residueStripItem, int row, int column)
{
while (column >= this.totalColumnCount)
{
this.identifierGrid.ColumnDefinitions.Add(new ColumnDefinition());
this.totalColumnCount++;
}
residueStripItem.Size = new Size(ResidueControl.itemWidth, ResidueControl.itemHeight);
residueStripItem.SetValue(Grid.RowProperty, row);
residueStripItem.SetValue(Grid.ColumnProperty, column);
this.identifierGrid.Children.Add(residueStripItem);
}
