/// <summary>
/// Updates the Diameter and Biomass properties.
/// </summary>
/// <remarks>
/// Should be called after all the species' cohorts have grown.
/// </remarks>
public void UpdateDiameterAndBiomass(IEcoregion ecoregion)
{
for (int i = 0; i < cohortData.Count; i++)
{
float diameter = 0;
Dictionary <int, double> diameters = DiameterInputs.AllData[ecoregion.Name][species.Name].Diameters;
if (diameters.ContainsKey(cohortData[i].Age))
{
diameter = (float)diameters[cohortData[i].Age];
}
else
{
for (int j = cohortData[i].Age; j > 0; j--)
{
if (diameters.ContainsKey(j))
{
diameter = (float)diameters[j]; //FIXME JSF
}
}
}
ISpeciesDensity speciesdensity = SpeciesParameters.SpeciesDensity.AllSpecies[species.Index];
double biomass_dbl = Math.Exp(SpeciesParameters.biomass_util.GetBiomassData(speciesdensity.BiomassClass, 1) + SpeciesParameters.biomass_util.GetBiomassData(speciesdensity.BiomassClass, 2) * Math.Log(diameter)) * cohortData[i].Treenumber / 1000.00; // Mg/cell
int biomass_int = System.Convert.ToInt32(biomass_dbl);
double biomass_gm2 = biomass_dbl * 1000 * 1000 / (EcoregionData.ModelCore.CellLength * EcoregionData.ModelCore.CellLength);
int biomass_gm2_int = System.Convert.ToInt32(biomass_gm2);
CohortData newCohortData = new CohortData(cohortData[i].Age, cohortData[i].Treenumber);
newCohortData.Biomass = biomass_gm2_int;
newCohortData.Diameter = diameter;
cohortData[i] = newCohortData;
}
}
//---------------------------------------------------------------------
/// <summary>
/// Adds a new cohort.
/// </summary>
public void AddNewCohort(ushort age, int initialTrees)
{
CohortData newCohortData = new CohortData(age, initialTrees);
Cohort cohort = new Cohort(species, age, initialTrees);
this.cohortData.Add(newCohortData);
}
//---------------------------------------------------------------------
/// <summary>
/// Combines all young cohorts into a single cohort whose age is the
/// succession timestep - 1 and whose biomass is the sum of all the
/// biomasses of the young cohorts.
/// </summary>
/// <remarks>
/// The age of the combined cohort is set to the succession timestep -
/// 1 so that when the combined cohort undergoes annual growth, its
/// age will end up at the succession timestep.
/// <p>
/// For this method, young cohorts are those whose age is less than or
/// equal to the succession timestep. We include the cohort whose age
/// is equal to the timestep because such a cohort is generated when
/// reproduction occurs during a succession timestep.
/// </remarks>
public void CombineYoungCohorts()
{
// Work from the end of cohort data since the array is in old-to-
// young order.
int youngCount = 0;
int totalTrees = 0;
for (int i = cohortData.Count - 1; i >= 0; i--)
{
CohortData data = cohortData[i];
if (data.Age <= Cohorts.SuccessionTimeStep)
{
youngCount++;
totalTrees += data.Treenumber;
}
else
{
break;
}
}
if (youngCount > 0)
{
cohortData.RemoveRange(cohortData.Count - youngCount, youngCount);
cohortData.Add(new CohortData((ushort)(Cohorts.SuccessionTimeStep - 1),
totalTrees));
}
}
//---------------------------------------------------------------------
public Cohort(ISpecies species,
CohortData cohortData)
{
this.species = (ISpecies)species;
this.speciesDensity = SpeciesParameters.SpeciesDensity.AllSpecies[species.Index];
this.data = cohortData;
}