Example #1
0
        public override int SaveECG(IECGFormat ecg, string patid, ECGConfig cfg)
        {
            if (Works() &&
                (_Config["AESCU"] != null) &&
                (_Config["AESCP"] != null) &&
                (_Config["Port"] != null))
            {
                if ((ecg != null) &&
                    ecg.Works() &&
                    (ecg.GetType() != typeof(DICOM.DICOMFormat)))
                {
                    IECGFormat dst = null;

                    int ret = ECGConverter.Instance.Convert(ecg, FormatName, cfg, out dst);

                    if (ret != 0)
                    {
                        return(2);
                    }

                    if ((dst != null) &&
                        dst.Works())
                    {
                        ecg = dst;
                    }
                }

                if ((ecg != null) &&
                    ecg.Works() &&
                    (ecg.GetType() == typeof(DICOM.DICOMFormat)))
                {
                    if (patid != null)
                    {
                        ecg.Demographics.PatientID = patid;
                    }

                    try
                    {
                        DICOM.DICOMFormat dcm = (DICOM.DICOMFormat)ecg;

                        BasicSCU scu = new BasicSCU(_Config["AESCU"], _Config["AESCP"], _Config["Server"], int.Parse(_Config["Port"]), 5000);

                        if (!scu.CStore(dcm.DICOMData))
                        {
                            return(4);
                        }

                        return(0);
                    }
                    catch {}

                    return(3);
                }

                return(2);
            }

            return(1);
        }
Example #2
0
        public override IECGFormat Read(Stream input, int offset, ECGConfig cfg)
        {
            IECGFormat ret = null;

            LastError = 0;

            if ((input != null) &&
                input.CanRead &&
                input.CanSeek)
            {
                long pos = input.Position;
                int  i   = 0;

                ECGConverter converter = ECGConverter.Instance;
                for (; i < converter.getNrSupportedFormats(); i++)
                {
                    if (converter.hasUnknownReaderSupport(i))
                    {
                        try
                        {
                            ret = converter.getFormat(i);

                            if ((ret != null) &&
                                ret.CheckFormat(input, offset + converter.getExtraOffset(i)))
                            {
                                ret.Read(input, offset + converter.getExtraOffset(i));
                                if (ret.Works())
                                {
                                    break;
                                }
                            }

                            input.Position = pos;
                        }
                        catch {}

                        if (ret != null)
                        {
                            ret.Dispose();
                            ret = null;
                        }
                    }
                }

                if (i == converter.getNrSupportedFormats())
                {
                    LastError = 2;
                }
            }
            else
            {
                LastError = 1;
            }

            return(ret);
        }
Example #3
0
 /// <summary>
 /// Function to write ECG file of any kind to byte array.
 /// </summary>
 /// <param name="format">ECG file to write</param>
 /// <param name="buffer">byte array to write to</param>
 /// <param name="offset"></param>
 /// <returns>error:
 /// 0x0) success</returns>
 public static void Write(IECGFormat format, byte[] buffer, int offset)
 {
     if (format != null)
     {
         _LastError = (format.Write(buffer, offset) << 2);
     }
     else
     {
         _LastError = 2;
     }
 }
Example #4
0
 /// <summary>
 /// unction to write ECG file of any kind to a stream
 /// </summary>
 /// <param name="format">ECG file to write</param>
 /// <param name="output">stream to write to</param>
 /// <returns>error:
 /// 0x0) success</returns>
 public static void Write(IECGFormat format, Stream output)
 {
     if (format != null)
     {
         _LastError = (format.Write(output) << 2);
     }
     else
     {
         _LastError = 2;
     }
 }
Example #5
0
        public override IECGFormat Read(byte[] buffer, int offset, ECGConfig cfg)
        {
            IECGFormat ret = null;

            LastError = 0;

            if (buffer != null)
            {
                int i = 0;

                ECGConverter converter = ECGConverter.Instance;
                for (; i < converter.getNrSupportedFormats(); i++)
                {
                    if (converter.hasUnknownReaderSupport(i))
                    {
                        try
                        {
                            ret = converter.getFormat(i);

                            if ((ret != null) &&
                                ret.CheckFormat(buffer, offset + converter.getExtraOffset(i)))
                            {
                                ret.Read(buffer, offset + converter.getExtraOffset(i));
                                if (ret.Works())
                                {
                                    break;
                                }
                            }
                        }
                        catch {}

                        if (ret != null)
                        {
                            ret.Dispose();
                            ret = null;
                        }
                    }
                }

                if (i == converter.getNrSupportedFormats())
                {
                    LastError = 2;
                }
            }
            else
            {
                LastError = 1;
            }

            return(ret);
        }
Example #6
0
        public override IECGFormat Read(Stream input, int offset, ECGConfig cfg)
        {
            LastError = 0;
            IECGFormat ret = null;

            if ((input != null) &&
                input.CanRead &&
                (_nrleads != -1) &&
                (_nrsamplesperlead != -1))
            {
                RawECGFormat MyFormat = new RawECGFormat();
                MyFormat.setNrLeads(_nrleads);
                MyFormat.setNrOfSamplePerLead(_nrsamplesperlead);
                MyFormat.setLitteEndian(_littleEndian);
                MyFormat.setSampleRate(_samplerate);
                MyFormat.setECGLSBperMV(_ECGLSBperMV);
                MyFormat.setIsADCFormat(_bIsADCFormat);
                MyFormat.setLeadConfiguration(_theLeadConfig);

                if (ret.Config != null)
                {
                    ret.Config.Set(cfg);

                    if (!ret.Config.ConfigurationWorks())
                    {
                        LastError = 3;

                        return(null);
                    }
                }

                ret = (IECGFormat)MyFormat;
                if (ret.CheckFormat(input, offset))
                {
                    LastError = (ret.Read(input, offset) << 2);
                }

                if (!ret.Works())
                {
                    LastError = 2;
                    ret       = null;
                }
            }
            else
            {
                LastError = 1;
            }
            return(ret);
        }
Example #7
0
        public override IECGFormat Read(string file, int offset, ECGConfig cfg)
        {
            LastError = 0;
            IECGFormat ret = null;

            if (file != null)
            {
                try
                {
                    Stream input = new FileStream(file, FileMode.Open, FileAccess.Read);
                    ret = Read(input, offset, cfg);
                }
                catch
                {
                    LastError = 1;
                }
            }
            return(ret);
        }
Example #8
0
        /// <summary>
        /// Conver to this supported format.
        /// </summary>
        /// <param name="src">source format.</param>
        /// <param name="cfg">configuration to set format to</param>
        /// <param name="dst">output of destination format.</param>
        /// <returns>0 on successful</returns>
        public int Convert(IECGFormat src, ECGConfig cfg, out IECGFormat dst)
        {
            dst = null;

            if (_FormatType == null)
            {
                return(1);
            }

            if (_ConvertFunction.Length == 0)
            {
                dst = (IECGFormat)Activator.CreateInstance(_FormatType);

                if ((cfg != null) &&
                    ((dst.Config == null) ||
                     !dst.Config.Set(cfg)))
                {
                    return(2);
                }

                return(ECGConverter.Convert(src, dst) << 2);
            }

            try
            {
                object[] args = new object[] { src, cfg, null };

                int ret = (int)_FormatType.GetMethod(_ConvertFunction).Invoke(null, args);

                if (args[2] != null)
                {
                    dst = (IECGFormat)args[2];
                }

                return(ret << 2);
            }
            catch
            {
            }

            return(1);
        }
Example #9
0
        /// <summary>
        /// Function to write ECG file of any kind to a file.
        /// </summary>
        /// <param name="format">ECG file to write</param>
        /// <param name="file">path to write to</param>
        /// <param name="overwrite">true if you want to overwrite existing files</param>
        /// <returns>error:
        /// 0x0) success</returns>
        public static void Write(IECGFormat format, string file, bool overwrite)
        {
            Stream output = null;

            try
            {
                output = new FileStream(file, (overwrite ? FileMode.Create : FileMode.CreateNew));
                Write(format, output);
            }
            catch
            {
                _LastError = 1;
            }
            finally
            {
                if (output != null)
                {
                    output.Close();
                }
            }
        }
Example #10
0
        public override IECGFormat Read(Stream input, int offset, ECGConfig cfg)
        {
            LastError = 0;
            IECGFormat ret = null;

            if ((input != null) &&
                (input.CanRead))
            {
                ret = new OmronECGFormat();

                if (ret.Config != null)
                {
                    ret.Config.Set(cfg);

                    if (!ret.Config.ConfigurationWorks())
                    {
                        LastError = 3;

                        return(null);
                    }
                }

                if (ret.CheckFormat(input, offset))
                {
                    LastError = (ret.Read(input, offset) << 2);
                }

                if (!ret.Works())
                {
                    LastError = 2;
                    ret       = null;
                }
            }
            else
            {
                LastError = 1;
            }
            return(ret);
        }
Example #11
0
        public override IECGFormat Read(byte[] buffer, int offset, ECGConfig cfg)
        {
            LastError = 0;
            IECGFormat ret = null;

            if (buffer != null)
            {
                ret = new OmronECGFormat();

                if (ret.Config != null)
                {
                    ret.Config.Set(cfg);

                    if (!ret.Config.ConfigurationWorks())
                    {
                        LastError = 3;

                        return(null);
                    }
                }

                if (ret.CheckFormat(buffer, offset))
                {
                    LastError = (ret.Read(buffer, offset) << 2);
                }

                if (!ret.Works())
                {
                    LastError = 2;
                    ret       = null;
                }
            }
            else
            {
                LastError = 1;
            }
            return(ret);
        }
Example #12
0
        static void Main(string[] args)
        {
            int bufferedSecondsToLoad = 0,
                bufferedOffsetToLoad  = 0;
            bool   Anonymize          = false;
            string patid = null;

            try
            {
                CheckVersion.OnNewVersion += new ECGConversion.CheckVersion.NewVersionCallback(CheckVersion_OnNewVersion);

                ECGConverter.Instance.waitForECGManagementSystemSupport("PACS");

                IECGManagementSystem pacs = ECGConverter.Instance.getECGManagementSystem("PACS");


                if (pacs == null)
                {
                    Console.Error.WriteLine("Error: DICOM plugin not available!");

                    return;
                }

                ECGConfig cfg = ECGConverter.Instance.getConfig(pacs.FormatName);

                // A normal parameters list.
                ArrayList al = new ArrayList();

                // first get all the configuration parameters.
                for (int i = 0; i < args.Length; i++)
                {
                    if (string.Compare(args[i], "-A") == 0)
                    {
                        // this will anonymize a ECG
                        Anonymize = true;
                    }
                    else if (args[i].StartsWith("-P"))
                    {
                        // Set the Patient ID of the ECG.
                        if (args[i].Length == 2)
                        {
                            if (args.Length == ++i)
                            {
                                Console.Error.WriteLine("Error: Bad Arguments!");

                                al.Clear();

                                break;
                            }

                            patid = args[i];
                        }
                        else
                        {
                            patid = args[i].Substring(2, args[i].Length - 2);
                        }
                    }
                    else if (args[i].StartsWith("-aet"))
                    {
                        // set AE Title of this SCU.
                        if (args[i].Length == 4)
                        {
                            if (args.Length == ++i)
                            {
                                Console.Error.WriteLine("Error: Bad Arguments!");

                                al.Clear();

                                break;
                            }

                            pacs.Config["AESCU"] = args[i];
                        }
                        else
                        {
                            pacs.Config["AESCU"] = args[i].Substring(4, args[i].Length - 4);
                        }
                    }
                    else if (args[i].StartsWith("-aec"))
                    {
                        // set AE Title of the called SCP.
                        if (args[i].Length == 4)
                        {
                            if (args.Length == ++i)
                            {
                                Console.Error.WriteLine("Error: Bad Arguments!");

                                al.Clear();

                                break;
                            }

                            pacs.Config["AESCP"] = args[i];
                        }
                        else
                        {
                            pacs.Config["AESCP"] = args[i].Substring(4, args[i].Length - 4);
                        }
                    }
                    else if (args[i].StartsWith("-C"))
                    {
                        // Add additional configuration items.
                        string[] temp = null;

                        if (args[i].Length == 2)
                        {
                            if (args.Length == ++i)
                            {
                                Console.Error.WriteLine("Error: Bad Arguments!");

                                al.Clear();

                                break;
                            }

                            temp = args[i].Split('=');
                        }
                        else
                        {
                            temp = args[i].Substring(2, args[i].Length - 2).Split('=');
                        }

                        if ((temp == null) ||
                            (cfg == null))
                        {
                            Console.Error.WriteLine("Error: Bad Arguments!");

                            al.Clear();

                            break;
                        }
                        else
                        {
                            cfg[temp[0]] = temp[1];
                        }
                    }
                    else if (args[i].StartsWith("-bsl"))
                    {
                        string val = null;

                        // set the nr of seconds to load for buffered signals.
                        if (args[i].Length == 4)
                        {
                            if (args.Length == ++i)
                            {
                                Console.Error.WriteLine("Error: Bad Arguments!");

                                al.Clear();

                                break;
                            }

                            val = args[i];
                        }
                        else
                        {
                            val = args[i].Substring(4, args[i].Length - 4);
                        }

                        if (val != null)
                        {
                            if (string.Compare(val, "all", true) == 0)
                            {
                                bufferedSecondsToLoad = int.MaxValue;
                            }
                            else
                            {
                                try
                                {
                                    char B = val[val.Length - 1];

                                    int nA = 0,
                                        nB = 1;

                                    if (char.ToLower(B) == 's')
                                    {
                                        nB  = 1;
                                        val = val.Substring(0, val.Length - 1);
                                    }
                                    else if (char.ToLower(B) == 'm')
                                    {
                                        nB  = 60;
                                        val = val.Substring(0, val.Length - 1);
                                    }
                                    else if (char.ToLower(B) == 'h')
                                    {
                                        nB  = 3600;
                                        val = val.Substring(0, val.Length - 1);
                                    }
                                    else if (char.ToLower(B) == 'd')
                                    {
                                        nB  = 86400;
                                        val = val.Substring(0, val.Length - 1);
                                    }
                                    else if (char.ToLower(B) == 'w')
                                    {
                                        nB  = 604800;
                                        val = val.Substring(0, val.Length - 1);
                                    }

                                    nA = int.Parse(val);

                                    bufferedSecondsToLoad = nA * nB;
                                }
                                catch
                                {
                                    Console.Error.WriteLine("Error: Bad Arguments!");

                                    al.Clear();

                                    break;
                                }
                            }
                        }
                    }
                    else if (args[i].StartsWith("-bol"))
                    {
                        string val = null;

                        // set the nr of seconds to load for buffered signals.
                        if (args[i].Length == 4)
                        {
                            if (args.Length == ++i)
                            {
                                Console.Error.WriteLine("Error: Bad Arguments!");

                                al.Clear();

                                break;
                            }

                            val = args[i];
                        }
                        else
                        {
                            val = args[i].Substring(4, args[i].Length - 4);
                        }

                        if (val != null)
                        {
                            try
                            {
                                char B = val[val.Length - 1];

                                int nA = 0,
                                    nB = 1;

                                if (char.ToLower(B) == 's')
                                {
                                    nB  = 1;
                                    val = val.Substring(0, val.Length - 1);
                                }
                                else if (char.ToLower(B) == 'm')
                                {
                                    nB  = 60;
                                    val = val.Substring(0, val.Length - 1);
                                }
                                else if (char.ToLower(B) == 'h')
                                {
                                    nB  = 3600;
                                    val = val.Substring(0, val.Length - 1);
                                }
                                else if (char.ToLower(B) == 'd')
                                {
                                    nB  = 86400;
                                    val = val.Substring(0, val.Length - 1);
                                }
                                else if (char.ToLower(B) == 'w')
                                {
                                    nB  = 604800;
                                    val = val.Substring(0, val.Length - 1);
                                }

                                nA = int.Parse(val);

                                bufferedOffsetToLoad = nA * nB;
                            }
                            catch
                            {
                                Console.Error.WriteLine("Error: Bad Arguments!");

                                al.Clear();

                                break;
                            }
                        }
                    }
                    else
                    {
                        // add to the normal parameters list.
                        al.Add(args[i]);
                    }
                }

                // Three or Four normal parameters are accepted!.
                if ((al.Count == 3) ||
                    (al.Count == 4))
                {
                    if (!pacs.ConfiguredToSave() ||
                        ((cfg != null) &&
                         !cfg.ConfigurationWorks()))
                    {
                        Console.Error.WriteLine("Error: Bad Configuration!");

                        return;
                    }

                    ECGConversion.IECGFormat src = null;

                    int offset = 0,
                        i      = 0;

                    string file = (string)al[i++];

                    if (al.Count == 4)
                    {
                        try
                        {
                            offset = int.Parse((string)al[i++]);
                        }
                        catch
                        {
                            Console.Error.WriteLine("Error: incorrect offset!");

                            return;
                        }
                    }

                    UnknownECGReader reader = new ECGConversion.UnknownECGReader();
                    src = reader.Read(file, offset);

                    if ((src == null) ||
                        !src.Works())
                    {
                        Console.Error.WriteLine("Error: Couldn't open ECG from specified file!");

                        return;
                    }

                    if ((bufferedSecondsToLoad > 0) ||
                        (bufferedOffsetToLoad > 0))
                    {
                        ECGConversion.ECGSignals.Signals sigs = null;

                        if ((src.Signals.getSignals(out sigs) == 0) &&
                            sigs.IsBuffered)
                        {
                            ECGConversion.ECGSignals.BufferedSignals bs = (ECGConversion.ECGSignals.BufferedSignals)sigs;

                            int start = 0,
                                end   = 0;

                            start = bs.RealRhythmStart + (bufferedOffsetToLoad * bs.RhythmSamplesPerSecond);
                            end   = (bufferedSecondsToLoad == int.MaxValue) ? bufferedSecondsToLoad : start + (bufferedSecondsToLoad * bs.RhythmSamplesPerSecond);

                            if (start > bs.RealRhythmEnd)
                            {
                                start = bs.RealRhythmEnd;
                            }

                            if (end > bs.RealRhythmEnd)
                            {
                                end = bs.RealRhythmEnd;
                            }

                            if (start < end)
                            {
                                bs.LoadSignal(start, end);

                                src.Signals.setSignals(bs);
                            }
                        }
                    }

                    if (Anonymize)
                    {
                        src.Anonymous();
                    }

                    pacs.Config["Server"] = (string)al[i++];
                    pacs.Config["Port"]   = (string)al[i++];

                    if (pacs.SaveECG(src, patid, cfg) != 0)
                    {
                        Console.Error.WriteLine("Storing of ECG failed!");
                    }
                }
                else
                {
                    // Provide a help message.
                    if (al.Count != 0)
                    {
                        Console.Error.WriteLine("Error: Bad Arguments!");
                    }

                    Console.WriteLine("Usage: ECGStoreSCU [-A] [-P patid] [-aet name] [-aec name] [-bsl nrsec] [-bol nrsec] {0}file [offset] host port", cfg == null ? "" : "[-C var=val] ");
                    Console.WriteLine();
                    Console.WriteLine("  file       path to input file");
                    Console.WriteLine("  offset     offset in input file");
                    Console.WriteLine("  server     hostname of DICOM peer");
                    Console.WriteLine("  port       tcp/ip port number of peer");
                    Console.WriteLine("  -A         anonymize output");
                    Console.WriteLine("  -P patid   specifiy a Patient ID for ECG");
                    Console.WriteLine("  -aet name  calling AE Title");
                    Console.WriteLine("  -aec name  called AE Title");
                    Console.WriteLine("  -bsl nrsec buffered seconds to load (add to value: s, m, h, d or w) or use: all");
                    Console.WriteLine("  -bol nrsec buffered seconds offset to load (add to value: s, m, h, d or w)");

                    if (cfg != null)
                    {
                        Console.WriteLine("  -C var=val providing a configuration item");
                        Console.WriteLine();
                        Console.WriteLine("Exporting type {0} has got the following configuration items:", pacs.FormatName);

                        int nrItems = cfg.NrConfigItems;

                        for (int i = 0; i < nrItems; i++)
                        {
                            string
                                name = cfg[i],
                                def  = cfg[name];

                            Console.Write("  {0}", name);
                            if (def != null)
                            {
                                Console.Write(" (default value: \"");
                                Console.Write(def);
                                Console.Write("\")");
                            }
                            Console.WriteLine();
                        }
                    }
                }
            }
            catch (Exception ex)
            {
                Console.Error.WriteLine("Error: {0}", ex.ToString());
            }
        }