static public void BWTTest()
{
string s = "attgccatgaaatggcgcgctttttttt$";
string q = "tg";
Console.WriteLine(s);
Console.WriteLine(q);
BWT bwt = new BWT(s);
FM_Matches fm = bwt.Match(q);
Console.WriteLine("{0}, {1}", fm.top, fm.bot);
for (int i = 0; i < fm.num; i++)
{
Console.WriteLine("{0}", fm.qpos[i]);
for (int j = 0; j < q.Length; j++)
{
Console.Write("{0}", s[fm.qpos[i] + j]);
}
Console.WriteLine();
}
//s 안의 q의 갯수만큼 top과 bot의 차이가 생긴다.
}
static public void AllRotaitonsTest()
{
string s = "abcd$";
Useful.Print2DArray(BWT.AllRotations(s), s.Length, s.Length);
}
