C# (CSharp) CacheUtils.IntermediateIO IntermediateIoCommon.ReadHeader Examples

Example #1

 public PredictionReader(Stream stream, IDictionary <ushort, IChromosome> refIndexToChromosome,
                         IntermediateIoCommon.FileType expectedFileType)
 {
     _refIndexToChromosome = refIndexToChromosome;
     _reader = FileUtilities.GetStreamReader(stream);
     IntermediateIoCommon.ReadHeader(_reader, expectedFileType);
 }

Example #2

File: RegulatoryRegionReader.cs Project: wangdi2014/Nirvana

 internal RegulatoryRegionReader(Stream stream, IDictionary <ushort, IChromosome> refIndexToChromosome)
 {
     _refIndexToChromosome = refIndexToChromosome;
     _reader = FileUtilities.GetStreamReader(stream);
     IntermediateIoCommon.ReadHeader(_reader, IntermediateIoCommon.FileType.Regulatory);
 }

Example #3

 internal MutableTranscriptReader(Stream stream, IDictionary <ushort, IChromosome> refIndexToChromosome)
 {
     _refIndexToChromosome = refIndexToChromosome;
     _reader = FileUtilities.GetStreamReader(stream);
     Header  = IntermediateIoCommon.ReadHeader(_reader, IntermediateIoCommon.FileType.Transcript);
 }

Example #4

 internal GenbankReader(Stream stream)
 {
     _reader = FileUtilities.GetStreamReader(stream);
     IntermediateIoCommon.ReadHeader(_reader, IntermediateIoCommon.FileType.Genbank);
 }

Example #5

File: GenbankReader.cs Project: modulexcite/Nirvana

 internal GenbankReader(Stream stream)
 {
     _reader = new StreamReader(stream);
     IntermediateIoCommon.ReadHeader(_reader, IntermediateIoCommon.FileType.Genbank);
 }