public void Compress()
{
int run = 0;
bool old = false;
while (!input.IsEmpty)
{
bool b = input.ReadBoolean();
if (b != old)
{
output.Write(run, LG_R);
run = 1;
old = !old;
}
else
{
if (run == R - 1)
{
output.Write(run, LG_R);
run = 0;
output.Write(run, LG_R);
}
run++;
}
}
output.Write(run, LG_R);
output.Close();
}
public void Compress()
{
string s = input.ReadString();
int N = s.Length;
output.Write(N);
// Write two-bit code for char.
for (int i = 0; i < N; i++)
{
int d = Alphabet.Dna.ToIndex(s[i]);
output.Write(d, 2);
}
output.Close();
input.Close();
}