private static List <string> ReadSingleFile()
{
var patterns = new List <string>();
JsonSerializer serializer = new JsonSerializer();
for (int index = Constants.MIN_SIZE_ANTIBODY; index <= Constants.MAX_SIZE_ANTIBODY; index++)
{
try
{
var fileName = $"memoryCells{index}.json";
var filePath = Path.Combine(Helpers.GetPath(), fileName);
using (StreamReader streamReader = new StreamReader(filePath))
{
JsonTextReader reader = new JsonTextReader(streamReader);
var fragments = serializer.Deserialize <List <string> >(reader);
fragments.ForEach(fragment => patterns.Add(fragment));
}
}
catch (Exception)
{
continue;
}
}
return(patterns);
}
private static void ReadResults(int antigensCount)
{
var results = new List <Result>();
if (IsSigle)
{
for (int index = Constants.MIN_SIZE_ANTIBODY; index <= Constants.MAX_SIZE_ANTIBODY; index++)
{
try
{
var fileName = $"results{index}.json";
var filePath = Path.Combine(Helpers.GetPath(), fileName);
JsonSerializer serializer = new JsonSerializer();
using (StreamReader streamReader = new StreamReader(filePath))
{
JsonTextReader reader = new JsonTextReader(streamReader);
var result = serializer.Deserialize <Result>(reader);
results.Add(result);
}
}
catch (Exception)
{
continue;
}
}
}
else
{
for (int index = 0; index < antigensCount; index++)
{
try
{
var fileName = $"results{index}.json";
var filePath = Path.Combine(Helpers.GetPath(), fileName);
JsonSerializer serializer = new JsonSerializer();
using (StreamReader streamReader = new StreamReader(filePath))
{
JsonTextReader reader = new JsonTextReader(streamReader);
var result = serializer.Deserialize <Result>(reader);
results.Add(result);
}
}
catch (Exception)
{
continue;
}
}
}
}
private void SaveMemoryCells(int index = 0)
{
if (_memoryCellsStr.Count() == 0)
{
return;
}
var filePath = Path.Combine(Helpers.GetPath(), $"memoryCells{(index == 0 ? _antibodySize : index)}.json");
using (StreamWriter file = File.CreateText(filePath))
{
JsonSerializer serializer = new JsonSerializer();
serializer.Serialize(file, _memoryCellsStr);
}
}
private void SaveResult(int index = 0)
{
if (_results.Average == 0)
{
return;
}
var filePath = Path.Combine(Helpers.GetPath(), $"results{index}.json");
using (StreamWriter file = File.CreateText(filePath))
{
JsonSerializer serializer = new JsonSerializer();
serializer.Serialize(file, _results);
}
}
private static List <string> ReadMultipleFiles(int antigensCount)
{
var patterns = new List <string>();
JsonSerializer serializer = new JsonSerializer();
for (int index = 0; index < antigensCount; index++)
{
try
{
var fileName = $"memoryCells{index}.json";
var filePath = Path.Combine(Helpers.GetPath(), fileName);
using (StreamReader streamReader = new StreamReader(filePath))
{
JsonTextReader reader = new JsonTextReader(streamReader);
var fragments = serializer.Deserialize <List <string> >(reader);
for (int j = 0; j < fragments.Count(); j++)
{
if (patterns.Count() <= j)
{
patterns.Add(fragments[j]);
}
else
{
patterns[j] += fragments[j];
}
}
}
}
catch (Exception)
{
continue;
}
}
return(patterns);
}