public static void WriteImageData(string imageDataPath, string connectiveAirwayVtpPath, vtkImageData imagedata) { vtkMetaImageWriter write = new vtkMetaImageWriter(); write.SetFileName(imageDataPath); write.SetInput(imagedata); write.Write(); write.Dispose(); try { VMTKUtil.DoMarchingCubeNotConnective(imageDataPath, connectiveAirwayVtpPath, 1); } catch (Exception ex) { Logger.Log(ex.ToString()); throw; } //vtkPolyData polyData = MarchingCubeImageData(imagedata, 1); //vtkXMLPolyDataWriter writepolyData = new vtkXMLPolyDataWriter(); //writepolyData.SetFileName(airwayVtpPath); //writepolyData.SetInput(polyData); //writepolyData.Write(); }
public static void WriteImageData(string imageDataPath, vtkImageData imagedata) { vtkMetaImageWriter write = new vtkMetaImageWriter(); write.SetFileName(imageDataPath); write.SetInput(imagedata); write.Write(); write.Dispose(); }
public static int ProcessOneMHDMD5(string filename) { vtkGDCMImageReader reader = vtkGDCMImageReader.New(); reader.FileLowerLeftOn(); reader.DebugOff(); int canread = reader.CanReadFile(filename); if (canread == 0) { string refms = gdcm.Testing.GetMediaStorageFromFile(filename); if (gdcm.MediaStorage.IsImage(gdcm.MediaStorage.GetMSType(refms))) { System.Console.Write("Problem with file: " + filename + "\n"); return(1); } // not an image return(0); } reader.SetFileName(filename); reader.Update(); // System.Console.Write(reader.GetOutput()); vtkMetaImageWriter writer = vtkMetaImageWriter.New(); writer.SetCompression(false); writer.SetInput(reader.GetOutput()); string subdir = "MetaImageMD5Activiz"; string tmpdir = gdcm.Testing.GetTempDirectory(subdir); if (!gdcm.PosixEmulation.FileIsDirectory(tmpdir)) { gdcm.PosixEmulation.MakeDirectory(tmpdir); } string mhdfile = gdcm.Testing.GetTempFilename(filename, subdir); string rawfile = mhdfile; mhdfile += ".mhd"; rawfile += ".raw"; writer.SetFileName(mhdfile); writer.Write(); string digestmhd = gdcm.Testing.ComputeFileMD5(mhdfile); string digestraw = gdcm.Testing.ComputeFileMD5(rawfile); string mhdref = vtkGDCMTesting.GetMHDMD5FromFile(filename); string rawref = vtkGDCMTesting.GetRAWMD5FromFile(filename); if (mhdref != digestmhd) { System.Console.Write("Problem with mhd file: " + filename + "\n"); System.Console.Write(digestmhd); System.Console.Write("\n"); System.Console.Write(mhdref); System.Console.Write("\n"); return(1); } if (rawref != digestraw) { System.Console.Write("Problem with raw file: " + filename + "\n"); System.Console.Write(digestraw); System.Console.Write("\n"); System.Console.Write(rawref); System.Console.Write("\n"); return(1); } return(0); }