public void readVTKDicom(string dirname)
{
vtk.vtkDICOMImageReader DICOMreader = new vtk.vtkDICOMImageReader();
DICOMreader.SetDirectoryName(dirname);
DICOMreader.SetDataOrigin(0, 0, 0);
DICOMreader.Update();
vtk.vtkImageChangeInformation imageChangeInformation = new vtk.vtkImageChangeInformation();
imageChangeInformation.SetInput(DICOMreader.GetOutput());
imageChangeInformation.CenterImageOn(); // Centered the image here....
imageChangeInformation.Update();
VoxelData = imageChangeInformation.GetOutput();
spacing = VoxelData.GetSpacing();
int numberofpixels = VoxelData.GetNumberOfPoints();
dimensions = VoxelData.GetDimensions();
metaScalarRange = VoxelData.GetScalarRange();
double[] origin = VoxelData.GetOrigin();
info = "\r\n VTK Dicom dir read, parameters: \r\n";
info += "Volume dimensions : " + dimensions[0] + " " + dimensions[1] + " " + dimensions[2] + "\r\n";
info += "Volume scales : " + spacing[0] + " " + spacing[1] + " " + spacing[2] + "\r\n";
info += "Scalar range : " + metaScalarRange[0] + " " + metaScalarRange[1] + "\r\n";
info += "Volume origin: " + origin[0] + " " + origin[1] + " " + origin[2] + "\r\n";
info += "Number of Pixels : " + numberofpixels + "\r\n";
GC.Collect();
}
public void ReadVTKV3D(string filename)
{
readv3dinfo V3Dfileinfo = new readv3dinfo();
V3Dfileinfo.getv3dinfo(filename);
vtk.vtkImageReader V3Dreader = new vtk.vtkImageReader();
//V3Dreader.RemoveAllInputs();
// all the slices are in one file
V3Dreader.SetFileDimensionality(3);
// image is greyscale
V3Dreader.SetNumberOfScalarComponents(1);
// 2 bytes per voxel
V3Dreader.SetDataScalarTypeToUnsignedShort();
// volume dimension sizes
int maxx = V3Dfileinfo.v3dsizes[0] - 1;
int maxy = V3Dfileinfo.v3dsizes[1] - 1;
int maxz = V3Dfileinfo.v3dsizes[2] - 1;
V3Dreader.SetDataExtent(0, maxx, 0, maxy, 0, maxz);
//voxel spacing
spacing = V3Dfileinfo.v3dscales;
V3Dreader.SetDataSpacing(spacing);
// set to zero unless you know
double[] origing = new double[3] {
0, 0, 0
};
V3Dreader.SetDataOrigin(origing);
V3Dreader.SetHeaderSize((uint)V3Dfileinfo.v3doffset);
// set filename
V3Dreader.SetFileName(V3Dfileinfo.v3dfilename);
V3Dreader.Update();
vtk.vtkImageChangeInformation imageChangeInformation = new vtk.vtkImageChangeInformation();
imageChangeInformation.SetInput(V3Dreader.GetOutput());
imageChangeInformation.CenterImageOn(); // Centered the image here....
imageChangeInformation.Update();
VoxelData = imageChangeInformation.GetOutput();
spacing = VoxelData.GetSpacing();
int numberofpixels = VoxelData.GetNumberOfPoints();
dimensions = VoxelData.GetDimensions();
metaScalarRange = VoxelData.GetScalarRange();
double[] origin = VoxelData.GetOrigin();
info = "\r\n VTK file read, parameters: \r\n";
info += "Volume dimensions : " + dimensions[0] + " " + dimensions[1] + " " + dimensions[2] + "\r\n";
info += "Volume scales : " + spacing[0] + " " + spacing[1] + " " + spacing[2] + "\r\n";
info += "Volume origin: " + origin[0] + " " + origin[1] + " " + origin[2] + "\r\n";
info += "Scalar range : " + metaScalarRange[0] + " " + metaScalarRange[1] + "\r\n";
info += "Number of Pixels : " + numberofpixels + "\r\n";
GC.Collect();
}