/// <summary>
/// Update a Resource
/// </summary>
/// <param name="source_id">string object</param>
/// <param name="name"string object></param>
/// <param name="internal_id">string object</param>
/// <param name="description">string object</param>
/// <param name="internal_url">string object</param>
/// <param name="resourceType">resourceType object</param>
/// <param name="collection_name">string object</param>
/// <param name="date_created">DateTime object</param>
/// <param name="gene_ids">string[] object</param>
/// <param name="ontologies">string[] object</param>
/// <param name="pubmedid">string object</param>
/// <returns></returns>
public virtual string UpdateResource(string source_id, string name, string internal_id, string description, string internal_url,
string resourceType, string collection_name, DateTime date_created, string[] gene_ids, string[] ontologies, string pubmedid)
{
dkCOIN.typeResource[] resources = new dkCOIN.typeResource[1];
dkCOIN.typeResource resource = new dkCOIN.typeResource();
resource.name = name;
resource.internal_id = internal_id;
resource.internal_url = internal_url;
resource.collection_name = collection_name;
resource.resourcetype = resourceType;
if (description.Length > 2000)
description = description.Substring(0, 1999);
resource.description = description;
resource.internal_create_date = date_created;
if (!string.IsNullOrEmpty(pubmedid))
{
dkCOIN.typePublication PubMedType = new dkCOIN.typePublication();
//PubMedType.citation = false;
PubMedType.pubmed_id = pubmedid;
resource.pubmed = new dkCOIN.typePublication[1];
resource.pubmed[0] = PubMedType;
}
if (date_created != null)
resource.internal_create_dateSpecified = true;
if (gene_ids != null)
resource.gene_id = gene_ids;
if (ontologies != null)
resource.term_identifier = ontologies;
resources[0] = resource;
try
{
if (webservice == null) return "";
StartSession();
int result_ct = 0;
result_ct = webservice.updateResource(resources).Length;
dkCOIN.typeResourceResult[] results = new dkCOIN.typeResourceResult[result_ct];
results = webservice.updateResource(resources);
string action = results[0].action;
bool inserted = action.ToLower().StartsWith("inserted");
EndSession();
return action + ": " + name + (!inserted ? " updated " : " inserted ") + "successfully.";
}
catch (Exception e)
{
EndSession();
string msg = e.Message;
msg = msg.Replace("\'", "");
msg = msg.Replace("\n", "");
EmailErrorNotification("UpdateResource", msg);
return null;
}
}
/// <summary>
/// Gets dkCOIN resources
/// </summary>
/// <param name="Search">DKCoinSearch Object</param>
/// <returns>DKCoinResourceList object</returns>
public virtual DKCoinResourceList GetResources(DKCoinSearch Search)
{
try
{
FilterResourceTypes = Search.FilterResourceTypes;
dkCOIN.typeSearchResourceParams[] parameters = new dkCOIN.typeSearchResourceParams[1];
dkCOIN.typeSearchResourceParams param = new dkCOIN.typeSearchResourceParams();
if (!string.IsNullOrEmpty(Search.ResourceType))
param.resourcetype = Search.ResourceType;
//
//EXCLUDE CURRENT CONSORTIUM'S DATA
string[] not_source_ids = new string[1];
string not_source_id = GetSourceID().ToString();
not_source_ids[0] = not_source_id;
param.not_source_id = not_source_ids;
if (!string.IsNullOrEmpty(Search.ResourceName))
param.name = Search.ResourceName;
if (Search.gene_ids != null)
param.gene_id = Search.gene_ids;
if (Search.term_ids != null)
param.term_identifier = Search.term_ids;
if (Search.PubMed != null && !string.IsNullOrEmpty(Search.PubMed.pubmed_id))
{
dkCOIN.typePublication[] pubmedids = new dkCOIN.typePublication[1];
pubmedids[0] = Search.PubMed;
param.pubmed = pubmedids;
}
if (!string.IsNullOrEmpty(Search.Source))
param.source_id = Search.Source;
parameters[0] = param;
DKCoinResourceList resources = GetResources(parameters);
return resources;
}
catch (Exception e)
{
EmailErrorNotification("GetResources(DKCoinSearch Search)", e.Message);
return null;
}
}
