public void Delete(WSI w)
{
var _context = new DataContext();
_context.WSIs.Remove(w);
_context.SaveChanges();
}
public string DoItUsernamePwd(string email, string password, string document)
{
var wsi = new WSI();
if (!wsi.AuthenticateRequest(email, password))
{
throw new ArgumentException("Authentication Failed");
}
try
{
wsi.LoadFromString(document);
wsi.DoIt();
return(wsi
.GetResults()
.InnerXml);
}
catch (XmlException)
{
throw new ArgumentException("Invalid Import XmlDocument");
}
catch
{
return(wsi.GetResultsAsString());
}
}
public void Insert(WSI w)
{
var _context = new DataContext();
_context.WSIs.Add(w);
_context.SaveChanges();
}
public void Update(WSI w)
{
var _context = new DataContext();
_context.Entry(w).State = EntityState.Modified;
_context.SaveChanges();
}
public void Delete(WSI w)
{
var _context = new ApplicationDbContext();
_context.WSIs.Remove(w);
_context.SaveChanges();
}
public void Insert(WSI w)
{
var _context = new ApplicationDbContext();
_context.WSIs.Add(w);
_context.SaveChanges();
}
public String DoIt(String AuthenticationEMail, String AuthenticationPassword, String XmlInputRequestString)
{
WSI IPXObject = new WSI();
if (!IPXObject.AuthenticateRequest(AuthenticationEMail, AuthenticationPassword))
{
throw new ArgumentException("Authentication Failed");
}
return(DoItHelper(IPXObject, ref XmlInputRequestString));
}
protected string GetPreviewUrl(WSI.Model.Entities.Information info)
{
var nav = info.NavigationList.ElementAtOrDefault(0);
if (food_navigations.Contains(nav.NavId.ToString()))
{
return string.Format("{0}?infoid={1}&navid={2}", Common.SITE_URL + "/Food/FoodDetail.aspx", info.InfoId, nav.NavId);
}
else
{
return string.Format("{0}?infoid={1}&navid={2}", Common.SITE_URL + Common.NEWS_PREVIEW_PAGE, info.InfoId, nav.NavId);
}
}
public String DoItWSE3(String XmlInputRequestString)
{
if (!HttpContext.Current.Items.Contains("WSIAuthenticateTokenReceived") ||
!(HttpContext.Current.User is AspDotNetStorefrontPrincipal))
{
// our username token manager did NOT set the context flag, indicating a successful authentication, so fail this request hard.
throw new ArgumentException("Authentication Failed");
}
// Since we already validated the user through the ASPDNSFUsernameTokenManager
// We're safe to assume that it's already the current principal
Customer thisCustomer = (HttpContext.Current.User as AspDotNetStorefrontPrincipal).ThisCustomer;
// we'll just explitictly pass the customer object itself
WSI IPXObject = new WSI(thisCustomer);
return(DoItHelper(IPXObject, ref XmlInputRequestString));
}
private String DoItHelper(WSI IPXObject, ref String XmlInputRequestString)
{
try
{
IPXObject.LoadFromString(XmlInputRequestString);
}
catch
{
throw new ArgumentException("Invalid Import XmlDocument");
}
IPXObject.DoIt();
try
{
XmlDocument d = IPXObject.GetResults();
String d_xml = d.InnerXml;
return(d_xml);
}
catch
{
return(IPXObject.GetResultsAsString());
}
}
public ActionResult Index(HttpPostedFileBase file, WSI wsi, Stain stain, Organ organ, Tissue tissue)
{
//TODO
var reglement = manager.GetReglement(stain.Name, organ.Name);
//var sharpnessEvaluationParameters = '+' + reglament.TileSize.ToString() + '+' + reglament.SharpnessThresholdValue+ '+' + reglament.Scaling.ToString()+ '+' + reglament.Edges.ToString();
//Directory for WSI Uploads on the Server
var root = @"C:\Users\AnnaToshiba2\Desktop\WSI\Sharpness_WebApp_Uploads\";
var fileName = "";
wsi.WSIId = Guid.NewGuid();
//Create a directory for a report and WSI
string outputDir = Path.Combine(Path.GetDirectoryName(root), User.Identity.GetUserName(), "WSI " + wsi.WSIId + @"\");
if (!Directory.Exists(outputDir))
{
Directory.CreateDirectory(outputDir);
}
if (file.ContentLength > 0)
{
fileName = Path.GetFileName(file.FileName);
var path = Path.Combine(outputDir, fileName);
file.SaveAs(path);
wsi.Path = path;
wsi.UserId = User.Identity.GetUserId();
repoWSIs.Insert(wsi);
}
//Generate a report link for the Viewer
var reportLink = User.Identity.GetUserName() + "/" + "WSI " + wsi.WSIId + "/" + fileName + " ";
var evaluationLink = root + reportLink.Replace("/", @"\");
//External sharpness console app
Process sharpnessConsoleApp = new Process();
//Path to the sharpness console app
sharpnessConsoleApp.StartInfo.FileName = @"C:\Users\AnnaToshiba2\Documents\GitHub\sharpness\sharpness console App\SharpnessExplorationCurrent\SharpnessExplorationCurrent\bin\x64\Release\SharpnessExplorationCurrent.exe";
//WSI Path + Reglemnets arguments
//structure -> wsi.path#(separator)#tileSize#threshold#scale#edges
sharpnessConsoleApp.StartInfo.Arguments = String.Format(@"""{0}""", wsi.Path + "#" + reglement.TileSize.ToString() + "#" + reglement.Scaling.ToString() + "#" + reglement.SharpnessThresholdValue.ToString() + "#" + reglement.Edges.ToString());
sharpnessConsoleApp.Start();
sharpnessConsoleApp.WaitForExit();
var report = new Report();
//TODO
//only one reglement is possible
report.ReglementId = reglement.ReglementId;
report.Comment = "Kommentar";
report.OrganName = organ.Name;
if (tissue != null)
{
report.TissueName = tissue.Name;
}
if (tissue == null)
{
report.TissueName = null;
}
report.WSIId = wsi.WSIId;
report.StainName = stain.Name;
report.SharpnessMapPath = outputDir + Path.GetFileNameWithoutExtension(fileName) + ".png";
report.SharpnessMapPathDebug = outputDir + Path.GetFileNameWithoutExtension(fileName) + "Debug.png";
var semaphoreValues = manager.GetSemaphoreValues(report.SharpnessMapPath);
var channelsValues = manager.GetChannelsValues(report.SharpnessMapPathDebug);
report.Semaphore_Red = semaphoreValues[0];
report.Semaphore_Green = semaphoreValues[1];
report.Semaphore_Yellow = semaphoreValues[2];
report.Red_Channel = channelsValues[0];
report.Blue_Channel = channelsValues[1];
if (semaphoreValues[1] > reglement.AcceptanceValue)
{
report.Evaluation = true;
}
else
{
report.Evaluation = false;
}
report.ReportLink = reportLink;
report.UserId = User.Identity.GetUserId();
repoReports.Insert(report);
return(RedirectToAction("Report", new { ReportId = report.ReportId }));
}
public ActionResult Index(HttpPostedFileBase file, WSI wsi, Stain stain, Organ organ, Tissue tissue)
{
//TODO
//Today only one value possible
//var tissue = _repoTissues.GetTissueByName("Tissue");
ISharpnessManager manager = new SharpnessManager();
//
var root = @"C:\Users\AnnaToshiba2\Desktop\WSI\Sharpness_WebApp_Uploads\";
var fileName = "";
wsi.WSIId = Guid.NewGuid();
string outputDir = Path.Combine(Path.GetDirectoryName(root), User.Identity.GetUserId(), "WSI " + wsi.WSIId + @"\");
if (!Directory.Exists(outputDir))
{
Directory.CreateDirectory(outputDir);
}
if (file.ContentLength > 0)
{
fileName = Path.GetFileName(file.FileName);
var path = Path.Combine(outputDir, fileName);
file.SaveAs(path);
wsi.Path = path;
wsi.UserId = User.Identity.GetUserId();
_repoWSIs.Insert(wsi);
}
var reportLink = User.Identity.GetUserId() + "/" + "WSI " + wsi.WSIId + "/" + fileName + " ";
var evaluationLink = root + reportLink.Replace("/", @"\");
Process first = new Process();
first.StartInfo.FileName = @"C:\Users\AnnaToshiba2\Documents\GitHub\sharpness\sharpness console App\SharpnessExplorationCurrent\SharpnessExplorationCurrent\bin\x64\Release\SharpnessExplorationCurrent.exe";
first.StartInfo.Arguments = String.Format(@"""{0}""", wsi.Path);
first.Start();
first.WaitForExit();
var report = new Report();
report.ReglamentId = _repoReglaments.GetReglamentByTitel("Default").ReglamentId;
report.Comment = "some words";
report.OrganName = organ.Name;
report.TissueName = tissue.Name;
report.WSIId = wsi.WSIId;
report.StainName = stain.Name;
report.SharpnessMapPath = outputDir + Path.GetFileNameWithoutExtension(fileName) + ".png";
report.SharpnessMapPathDebug = outputDir + Path.GetFileNameWithoutExtension(fileName) + "Debug.png";
var semaphoreValues = manager.GetSemaphoreValues(report.SharpnessMapPath);
var channelsValues = manager.GetChannelsValues(report.SharpnessMapPathDebug);
report.Semaphore_Red = semaphoreValues[0];
report.Semaphore_Green = semaphoreValues[1];
report.Semaphore_Yellow = semaphoreValues[2];
report.Red_Channel = channelsValues[0];
report.Blue_Channel = channelsValues[1];
if (semaphoreValues[1] > 70)
{
report.Evaluation = true;
}
else
{
report.Evaluation = false;
}
report.ReportLink = reportLink;
report.UserId = User.Identity.GetUserId();
_repoReports.Insert(report);
return(RedirectToAction("Report", new { ReportId = report.ReportId }));
}
private void setRoleInfo(WSI.DataAccess.WSICmsContext context, UserInfo user, IList<string> roleidlist)
{
user.RoleList = new List<RoleInfo>();
if (roleidlist != null)
{
foreach (var roleid in roleidlist)
{
Guid id;
RoleInfo role;
if (Guid.TryParse(roleid, out id))
{
role = context.RoleInfoes.Find(id);
if (role != null)
{
user.RoleList.Add(role);
}
}
}
}
}
//设置新闻的所属栏目
private void setNavigation(WSI.DataAccess.WSICmsContext context, Information info, IList<string> idlist)
{
//初始化
info.NavigationList = new List<FrontendNavigation>();
foreach (var navid in idlist)
{
Guid id;
if (Guid.TryParse(navid, out id))
{
FrontendNavigation nav = context.FrontendNavigations.Find(id);
if (nav != null)
{
info.NavigationList.Add(nav);
}
}
}
}
//设置新闻的关键字
private void setKeyWords(WSI.DataAccess.WSICmsContext context, Information info, IList<string> keywords)
{
//添加时初始化列表，修改时删除所有关键字关联重新添加
info.KeyWords = new List<KeyWord>();
foreach (var key in keywords)
{
if (key != "")
{
KeyWord keyword = context.KeyWords.SingleOrDefault(k => k.Content == key);
//如果关键字已存在
if (keyword != null)
{
info.KeyWords.Add(keyword);
}
else
{
//只需要直接将关键字添加到新闻的关键字字段中
info.KeyWords.Add(new KeyWord()
{
Content = key,
CreateTime = DateTime.Now
});
}
}
}
}
