public IEnumerable <KeyValuePair <string, string> > AlignedSequence()
{
var rmIncr = 0;
var seq1Incr = 0;
var seq2Incr = 0;
var resultMatrix = new List <KeyValuePair <string, string> >();
TracebackPath.Reverse();
foreach (var tracebackItem in TracebackPath)
{
if (tracebackItem == Move.DiagonalMove) // match
{
resultMatrix.Add(new KeyValuePair <string, string>(
Sequence1[seq1Incr].ToString(),
Sequence2[seq2Incr].ToString()));
seq1Incr++;
seq2Incr++;
}
else if (tracebackItem == Move.VerticalMove)
{
resultMatrix.Add(new KeyValuePair <string, string>(
"-", Sequence2[seq2Incr].ToString()));
seq2Incr++;
}
else
{
resultMatrix.Add(new KeyValuePair <string, string>(
Sequence1[seq1Incr].ToString(), "-"));
seq1Incr++;
}
rmIncr++;
}
return(resultMatrix);
}
