private void FilterTaxons()
{
if (Taxons != null)
{
bool?selectedFilter = null;
var prefixFilter = "";
if (TaxonFilter == "valda")
{
selectedFilter = true;
}
else if (TaxonFilter == "ejvalda")
{
selectedFilter = false;
}
else
{
prefixFilter = TaxonFilter;
}
FilteredTaxons = new ObservableCollection <TaxonItemModel>(
Taxons.Where(x =>
(!selectedFilter.HasValue || x.Selected == selectedFilter.Value)
&&
(string.IsNullOrEmpty(prefixFilter) || x.PrefixFilter == prefixFilter)
&&
(string.IsNullOrEmpty(SearchText) || x.Name.IndexOf(SearchText, StringComparison.CurrentCultureIgnoreCase) != -1)
));
}
else
{
FilteredTaxons = null;
}
}
public async Task <Synonym> Process(Synonym synonym)
{
var taxon = Taxons.FirstOrDefault(t => t.Kingdom == synonym.Taxon.Kingdom &&
t.Subkingdom == synonym.Taxon.Subkingdom &&
t.Infrakingdom == synonym.Taxon.Infrakingdom &&
t.Phylum == synonym.Taxon.Phylum &&
t.Subphylum == synonym.Taxon.Subphylum &&
t.Class == synonym.Taxon.Class &&
t.Subclass == synonym.Taxon.Subclass &&
t.Superorder == synonym.Taxon.Superorder &&
t.Order == synonym.Taxon.Order &&
t.Family == synonym.Taxon.Family &&
t.Genus == synonym.Taxon.Genus &&
t.Species == synonym.Taxon.Species &&
t.Subspecies == synonym.Taxon.Subspecies &&
t.Variety == synonym.Taxon.Variety &&
t.Subvariety == synonym.Taxon.Subvariety &&
t.Form == synonym.Taxon.Form);
if (taxon == null)
{
taxon = await _taxonService.AddOrUpdateTaxonAsync(synonym.Taxon);
Taxons.Add(taxon);
}
var originResult = Origins.FirstOrDefault(o => o.ParentOrigin.OriginId == Origin.OriginId &&
o.ExternalId == synonym.Origin.ExternalId &&
o.AltExternalId == synonym.Origin.AltExternalId);
if (originResult == null)
{
originResult = await _originService.GetOriginAsync(Origin.OriginId, synonym.Origin.ExternalId, synonym.Origin.AltExternalId);
Origins.Add(originResult);
}
if (originResult == null)
{
originResult = await _originService.AddOrUpdateOriginAsync(synonym.Origin, null);
Origins.Add(originResult);
}
synonym.Origin = originResult;
var synonymResult = await _synonymService.GetSynonymAsync(s => s.Name == synonym.Name &&
s.Rank == synonym.Rank &&
s.TaxonId == synonym.TaxonId &&
s.OriginId == originResult.OriginId);
if (synonymResult == null)
{
synonym.Origin = originResult;
synonym.Taxon = taxon;
synonymResult = await _synonymService.AddOrUpdateSynonymAsync(synonym);
}
return(synonymResult);
}
private void FilterTaxons()
{
if (Taxons != null)
{
FilteredTaxons = new List <Taxon>(
Taxons.Where(x =>
(string.IsNullOrEmpty(TaxonFilter) || x.Type == TaxonFilter)
&&
(string.IsNullOrEmpty(SearchText) || x.Name.IndexOf(SearchText, StringComparison.CurrentCultureIgnoreCase) != -1)
));
}
else
{
FilteredTaxons = null;
}
}
public ActionResult EditReview(int id)
{
IReviewRepository reviews = new ReviewRepository();
IGenericRepository generics = new GenericRepository();
ITaxonRepository taxons = new TaxonRepository();
TblReview review = reviews.getSingleReviewEdit(id);
ViewData["addphase"] = new SelectList(generics.getAllPhase(), "ID", "PhaseDesc", review.PhaseID);
ViewData["committee"] = new SelectList(generics.getAllCommittees(), "ID", "Description", review.CommitteeID);
int animal = generics.getExternalRef(UpdateUtils.ANIMALS, UpdateUtils.TYPE_KINGDOM);
int kingdom = (int)review.KingdomID;
IList <AGeneralTaxon> lists_countries, lists_genus, lists_species = null;
int SpeciesID = review.TaxonID.GetValueOrDefault();
Taxons genus = taxons.getTaxonbySpecies(SpeciesID, (int)review.KingdomID);
if (review.KingdomID == animal)
{
lists_countries = taxons.getCountries(SpeciesID, UpdateUtils.SPECIES, UpdateUtils.ANIMALS);
lists_genus = taxons.getAGenus();
lists_species = taxons.getASpeciesbyGenus(genus.genrecid);
}
else
{
lists_countries = taxons.getCountries(SpeciesID, UpdateUtils.SPECIES, UpdateUtils.PLANTS);
lists_genus = taxons.getPGenus();
lists_species = taxons.getPSpeciesbyGenus(genus.genrecid);
}
ViewData["animal"] = animal;
ViewData["kingdom"] = kingdom;
ViewData["countries"] = new SelectList(lists_countries, "RecID", "TaxonName", review.CountryID);
ViewData["genus"] = new SelectList(lists_genus, "RecID", "TaxonName", genus.genrecid);
ViewData["species"] = new SelectList(lists_species, "RecID", "TaxonName", SpeciesID);
return(View());
}
public async Task <IEnumerable <Synonym> > Process(IEnumerable <Synonym> synonyms)
{
var synonymResults = new List <Synonym>();
var newOrigins = new List <Origin>();
var newSynonyms = new List <Synonym>();
foreach (var synonym in synonyms)
{
var taxon = Taxons.FirstOrDefault(t => t.Kingdom == synonym.Taxon.Kingdom &&
t.Subkingdom == synonym.Taxon.Subkingdom &&
t.Infrakingdom == synonym.Taxon.Infrakingdom &&
t.Phylum == synonym.Taxon.Phylum &&
t.Subphylum == synonym.Taxon.Subphylum &&
t.Class == synonym.Taxon.Class &&
t.Subclass == synonym.Taxon.Subclass &&
t.Superorder == synonym.Taxon.Superorder &&
t.Order == synonym.Taxon.Order &&
t.Family == synonym.Taxon.Family &&
t.Genus == synonym.Taxon.Genus &&
t.Species == synonym.Taxon.Species &&
t.Subspecies == synonym.Taxon.Subspecies &&
t.Variety == synonym.Taxon.Variety &&
t.Subvariety == synonym.Taxon.Subvariety &&
t.Form == synonym.Taxon.Form);
if (taxon == null)
{
taxon = await _taxonService.AddOrUpdateTaxonAsync(synonym.Taxon);
Taxons.Add(taxon);
}
synonym.Taxon = taxon;
// Do we already have the same origin in our insert list?
var originResult = newOrigins.FirstOrDefault(o => o.ParentOrigin.OriginId == Origin.OriginId &&
o.ExternalId == synonym.Origin.ExternalId &&
o.AltExternalId == synonym.Origin.AltExternalId);
if (originResult == null)
{
// See if it already exists, if not, add it to the insert list
originResult = await _originService.GetOriginAsync(Origin.OriginId, synonym.Origin.ExternalId, synonym.Origin.AltExternalId);
if (originResult == null)
{
newOrigins.Add(synonym.Origin);
}
else
{
Origins.Add(originResult);
}
}
}
if (newOrigins.Any())
{
newOrigins = (await _originService.AddOriginsAsync(newOrigins)).ToList();
Origins.AddRange(newOrigins);
}
foreach (var synonym in synonyms)
{
var origin = Origins.FirstOrDefault(o => o.ParentOrigin.OriginId == Origin.OriginId &&
o.ExternalId == synonym.Origin.ExternalId &&
o.AltExternalId == synonym.Origin.AltExternalId);
if (origin == null)
{
origin = await _originService.GetOriginAsync(Origin.OriginId, synonym.Origin.ExternalId, synonym.Origin.AltExternalId);
}
synonym.Origin = origin;
var synonymResult = await _synonymService.GetSynonymAsync(s => s.Name == synonym.Name &&
s.Rank == synonym.Rank &&
s.TaxonId == synonym.TaxonId &&
s.OriginId == synonym.Origin.OriginId);
if (synonymResult == null)
{
newSynonyms.Add(synonym);
}
}
if (newSynonyms.Any())
{
newSynonyms = (await _synonymService.AddSynonymsAsync(newSynonyms)).ToList();
}
foreach (var newSynonym in newSynonyms)
{
var synonym = synonyms.First(s => s.Origin.OriginId == newSynonym.Origin.OriginId &&
s.Taxon.TaxonId == newSynonym.Taxon.TaxonId);
newSynonym.Origin = Origins.FirstOrDefault(o => o.OriginId == newSynonym.Origin.OriginId);
newSynonym.Taxon = Taxons.FirstOrDefault(t => t.TaxonId == newSynonym.Taxon.TaxonId);
}
return(newSynonyms);
}
public async Task <PlantInfo> Process(PlantInfo plantInfo)
{
var lifeform = Lifeforms.FirstOrDefault(l => l.ScientificName == plantInfo.ScientificName);
if (lifeform == null)
{
lifeform = await _lifeformService.AddOrUpdateLifeformAsync(plantInfo.Lifeform);
Lifeforms.Add(lifeform);
}
var taxon = Taxons.FirstOrDefault(t => t.Kingdom == plantInfo.Taxon.Kingdom &&
t.Subkingdom == plantInfo.Taxon.Subkingdom &&
t.Infrakingdom == plantInfo.Taxon.Infrakingdom &&
t.Phylum == plantInfo.Taxon.Phylum &&
t.Subphylum == plantInfo.Taxon.Subphylum &&
t.Class == plantInfo.Taxon.Class &&
t.Subclass == plantInfo.Taxon.Subclass &&
t.Superorder == plantInfo.Taxon.Superorder &&
t.Order == plantInfo.Taxon.Order &&
t.Family == plantInfo.Taxon.Family &&
t.Genus == plantInfo.Taxon.Genus &&
t.Species == plantInfo.Taxon.Species &&
t.Subspecies == plantInfo.Taxon.Subspecies &&
t.Variety == plantInfo.Taxon.Variety &&
t.Subvariety == plantInfo.Taxon.Subvariety &&
t.Form == plantInfo.Taxon.Form);
if (taxon == null)
{
taxon = await _taxonService.AddOrUpdateTaxonAsync(plantInfo.Taxon);
Taxons.Add(taxon);
}
var originResult = Origins.FirstOrDefault(o => o.ParentOrigin.OriginId == Origin.OriginId &&
o.ExternalId == plantInfo.Origin.ExternalId &&
o.AltExternalId == plantInfo.Origin.AltExternalId);
if (originResult == null)
{
originResult = await _originService.GetOriginAsync(Origin.OriginId, plantInfo.Origin.ExternalId, plantInfo.Origin.AltExternalId);
Origins.Add(originResult);
}
if (originResult == null)
{
originResult = await _originService.AddOrUpdateOriginAsync(plantInfo.Origin, null);
Origins.Add(originResult);
}
var plantInfoResult = await _plantInfoService.GetPlantInfoAsync(originResult.OriginId, taxon.TaxonId);
if (plantInfoResult == null)
{
plantInfo.Origin = originResult;
plantInfo.Lifeform = lifeform;
plantInfo.Taxon = taxon;
plantInfoResult = await _plantInfoService.AddOrUpdatePlantInfoAsync(plantInfo);
}
return(plantInfoResult);
}
public async Task <IEnumerable <PlantInfo> > Process(IEnumerable <PlantInfo> plantInfos)
{
var newOrigins = new List <Origin>();
var newPlantInfos = new List <PlantInfo>();
foreach (var plantInfo in plantInfos)
{
var lifeform = Lifeforms.FirstOrDefault(l => l.ScientificName == plantInfo.ScientificName);
if (lifeform == null)
{
lifeform = await _lifeformService.AddOrUpdateLifeformAsync(plantInfo.Lifeform);
Lifeforms.Add(lifeform);
}
plantInfo.Lifeform = lifeform;
var taxon = Taxons.FirstOrDefault(t => t.Kingdom == plantInfo.Taxon.Kingdom &&
t.Subkingdom == plantInfo.Taxon.Subkingdom &&
t.Infrakingdom == plantInfo.Taxon.Infrakingdom &&
t.Phylum == plantInfo.Taxon.Phylum &&
t.Subphylum == plantInfo.Taxon.Subphylum &&
t.Class == plantInfo.Taxon.Class &&
t.Subclass == plantInfo.Taxon.Subclass &&
t.Superorder == plantInfo.Taxon.Superorder &&
t.Order == plantInfo.Taxon.Order &&
t.Family == plantInfo.Taxon.Family &&
t.Genus == plantInfo.Taxon.Genus &&
t.Species == plantInfo.Taxon.Species &&
t.Subspecies == plantInfo.Taxon.Subspecies &&
t.Variety == plantInfo.Taxon.Variety &&
t.Subvariety == plantInfo.Taxon.Subvariety &&
t.Form == plantInfo.Taxon.Form);
if (taxon == null || taxon.Kingdom != plantInfo.Taxon.Kingdom || taxon.Family != plantInfo.Taxon.Family)
{
taxon = await _taxonService.AddOrUpdateTaxonAsync(plantInfo.Taxon);
Taxons.Add(taxon);
}
plantInfo.Taxon = taxon;
// Do we already have the same origin in our insert list?
var originResult = newOrigins.FirstOrDefault(o => o.ParentOrigin.OriginId == Origin.OriginId &&
o.ExternalId == plantInfo.Origin.ExternalId &&
o.AltExternalId == plantInfo.Origin.AltExternalId);
if (originResult == null)
{
// See if it already exists, if not, add it to the insert list
originResult = await _originService.GetOriginAsync(Origin.OriginId, plantInfo.Origin.ExternalId, plantInfo.Origin.AltExternalId);
if (originResult == null)
{
newOrigins.Add(plantInfo.Origin);
}
else
{
Origins.Add(originResult);
}
}
}
if (newOrigins.Any())
{
newOrigins = (await _originService.AddOriginsAsync(newOrigins)).ToList();
Origins.AddRange(newOrigins);
}
var distinctPlantInfos = plantInfos.DistinctBy(p => new
{
p.Taxon.Genus,
p.Taxon.Species,
p.Taxon.Subspecies,
p.Taxon.Variety,
p.Taxon.Subvariety,
p.Taxon.Form
});
foreach (var plantInfo in distinctPlantInfos)
{
var origin = Origins.FirstOrDefault(o => o.ExternalId == plantInfo.Origin.ExternalId &&
o.AltExternalId == plantInfo.Origin.AltExternalId);
if (origin == null)
{
origin = await _originService.GetOriginAsync(Origin.OriginId, plantInfo.Origin.ExternalId, plantInfo.Origin.AltExternalId);
}
plantInfo.Origin = origin;
var plantInfoResult = await _plantInfoService.GetPlantInfoAsync(plantInfo.Origin.OriginId, plantInfo.Taxon.TaxonId);
if (plantInfoResult == null)
{
newPlantInfos.Add(plantInfo);
}
}
if (newPlantInfos.Any())
{
newPlantInfos = (await _plantInfoService.AddPlantInfosAsync(newPlantInfos)).ToList();
}
foreach (var newPlantInfo in newPlantInfos)
{
var plantInfo = plantInfos.First(p => p.Origin.OriginId == newPlantInfo.Origin.OriginId &&
p.Taxon.TaxonId == newPlantInfo.Taxon.TaxonId);
plantInfo.PlantInfoId = newPlantInfo.PlantInfoId;
newPlantInfo.Taxon = plantInfo.Taxon;
newPlantInfo.Origin = plantInfo.Origin;
newPlantInfo.Lifeform = plantInfo.Lifeform;
}
var plantInfoLocations = plantInfos.Where(p => p.Locations != null && p.Locations.Any())
.SelectMany(p => p.Locations)
.DistinctBy(pl => new { pl.PlantInfo.PlantInfoId, pl.Location.LocationId })
.ToList();
if (plantInfoLocations.Any() && newPlantInfos.Any())
{
var regions = plantInfos.SelectMany(p => p.Locations).Select(l => l.Location.Region).Distinct();
var countries = plantInfos.SelectMany(p => p.Locations).Select(l => l.Location.Country).Distinct();
var locations = (await _locationService.GetLocationsAsync(l => countries.Contains(l.Country) || regions.Contains(l.Region))).ToList();
var missingLocations = plantInfoLocations.GroupJoin(locations,
pl => new { pl.Location.Region, pl.Location.Country },
l => new { l.Region, l.Country },
(pl, l) => pl.Location)
.DistinctBy(l => new { l.Region, l.Country })
.ToList();
if (missingLocations.Any())
{
var locationResult = await _locationService.AddLocationsAsync(missingLocations);
locations.AddRange(locationResult.ToList());
}
var plantLocationsToAdd = new List <PlantLocation>();
foreach (var plantInfoLocation in plantInfoLocations)
{
var newPlantInfo = newPlantInfos.FirstOrDefault(npl => npl.Origin.OriginId == plantInfoLocation.PlantInfo.Origin.OriginId &&
npl.Taxon.TaxonId == plantInfoLocation.PlantInfo.Taxon.TaxonId);
if (newPlantInfo != null)
{
var location = locations.First(l => l.Country == plantInfoLocation.Location.Country &&
l.Region == plantInfoLocation.Location.Region);
plantLocationsToAdd.Add(new PlantLocation
{
PlantInfo = newPlantInfo,
Location = location,
Status = plantInfoLocation.Status
});
}
}
if (plantInfoLocations.Any())
{
var plantLocationsResult = (await _plantInfoService.AddPlantLocations(plantLocationsToAdd)).ToList();
foreach (var newPlantInfo in newPlantInfos)
{
var newPlantInfoLocations = plantLocationsResult.Where(pl => pl.PlantInfo.PlantInfoId == newPlantInfo.PlantInfoId);
newPlantInfo.Locations = newPlantInfoLocations.Any() ? newPlantInfoLocations : null;
}
}
}
return(newPlantInfos);
}
