public void other_method_file_issue()
{
//have a name other than setting or action
using (StreamWriter file = new StreamWriter(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml")))
file.WriteLine(Sweet.save_method());
Assert.IsTrue(Sweet.open_method(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"), string.Join(Environment.NewLine, File.ReadAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"))), true, out string warning1));
string[] edit = File.ReadAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"));
edit[2] = " <badname field_type=\"System.Boolean\" field_name=\"badfieldname\" field_value=\"True\" />";
File.WriteAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"), edit);
Assert.IsFalse(Sweet.open_method(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"), string.Join(Environment.NewLine, File.ReadAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"))), true, out string warning2));
using (StreamWriter file = new StreamWriter(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml")))
file.WriteLine(Sweet.save_method());
edit = File.ReadAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"));
string[] new_edit = new string[edit.Length + 1];
new_edit[0] = edit[0];
new_edit[1] = edit[1];
new_edit[2] = " <setting field_type=\"System.Boolean\" field_name=\"badfieldname\" field_value=\"True\" />";
for (int i = 3; i < edit.Length + 1; i++)
{
new_edit[i] = edit[i - 1];
}
string message;
File.WriteAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"), new_edit);
Assert.IsTrue(Sweet.open_method(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"), string.Join(Environment.NewLine, File.ReadAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"))), true, out message));
Assert.AreEqual("Setting badfieldname has changed, and it was not changed to preset System.Boolean True in the current run\r\n", message);
using (StreamWriter file = new StreamWriter(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml")))
file.WriteLine(Sweet.save_method());
edit = File.ReadAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"));
new_edit = new string[edit.Length - 1];
new_edit[0] = edit[0];
new_edit[1] = edit[1];
for (int i = 2; i < edit.Length - 1; i++)
{
new_edit[i] = edit[i + 1];
}
File.WriteAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"), new_edit);
Assert.IsTrue(Sweet.open_method(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"), string.Join(Environment.NewLine, File.ReadAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"))), true, out message));
Assert.AreEqual("The following parameters did not have a setting specified: neucode_labeled\r\n", message);
Sweet.add_file_action(new InputFile(Path.Combine(TestContext.CurrentContext.TestDirectory, "test_td_hits_file.xlsx"), Purpose.TopDown));
using (StreamWriter file = new StreamWriter(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml")))
file.WriteLine(Sweet.save_method());
edit = File.ReadAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"));
edit[81] = " <action action=\"badaction file filepath with purpose TopDown\" />";
File.WriteAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"), edit);
Assert.IsFalse(Sweet.open_method(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"), string.Join(Environment.NewLine, File.ReadAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"))), true, out message));
}
public void add_file_from_presets()
{
List <InputFile> destination = new List <InputFile>();
InputFile mock = new InputFile(Path.Combine(TestContext.CurrentContext.TestDirectory, "test_directory", "one.xlsx"), Purpose.Identification);
Sweet.add_file_action(mock);
Sweet.change_file(mock, mock.lt_condition, nameof(mock.lt_condition), mock.lt_condition, "Normal");
Sweet.change_file(mock, mock.hv_condition, nameof(mock.hv_condition), mock.hv_condition, "Stress");
Sweet.change_file(mock, mock.biological_replicate, nameof(mock.biological_replicate), mock.biological_replicate.ToString(), "2");
using (StreamWriter file = new StreamWriter(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml")))
file.WriteLine(Sweet.save_method());
Sweet.open_method(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"), string.Join(Environment.NewLine, File.ReadAllLines(Path.Combine(TestContext.CurrentContext.TestDirectory, "method.xml"))), true, out string warning);
Sweet.add_files_from_presets(destination);
Assert.AreEqual(1, destination.Count);
Assert.True(destination[0].lt_condition == "Normal");
Assert.True(destination[0].hv_condition == "Stress");
Assert.True(destination[0].biological_replicate == "2");
}