public void testTableRowParsing()
{
StagingTable table = new StagingTable();
table.setId("test_table");
table.setColumnDefinitions(new List <IColumnDefinition>()
{
new StagingColumnDefinition("key1", "Input 1", ColumnType.INPUT)
});
table.setRawRows(new List <List <String> >());
table.getRawRows().Add(new List <String>()
{
",1,2,3"
});
table.getRawRows().Add(new List <String>()
{
"1,2,3,"
});
StagingDataProvider.initTable(table);
Assert.AreEqual(2, table.getTableRows().Count);
//StagingTableRow
List <ITableRow> tablerows = table.getTableRows();
StagingTableRow row = (tablerows[0] as StagingTableRow);
Assert.AreEqual(4, row.getInputs()["key1"].Count);
row = (tablerows[1] as StagingTableRow);
Assert.AreEqual(4, row.getInputs()["key1"].Count);
}
public void testPadStart()
{
Assert.IsNull(StagingDataProvider.padStart(null, 1, '0'));
Assert.AreEqual(StagingDataProvider.padStart("123", 1, '0'), "123");
Assert.AreEqual(StagingDataProvider.padStart("123", 3, '0'), "123");
Assert.AreEqual(StagingDataProvider.padStart("123", 4, '0'), "0123");
Assert.AreEqual(StagingDataProvider.padStart("1", 5, '0'), "00001");
}
public void testCachedSiteAndHistology()
{
StagingDataProvider provider = getProvider();
Assert.IsTrue(provider.getValidSites().Count > 0);
Assert.IsTrue(provider.getValidHistologies().Count > 0);
// site tests
List <String> validSites = new List <String>()
{
"C000", "C809"
};
List <String> invalidSites = new List <String>()
{
"C727", "C810"
};
foreach (String site in validSites)
{
Assert.IsTrue(provider.getValidSites().Contains(site));
}
foreach (String site in invalidSites)
{
Assert.IsFalse(provider.getValidSites().Contains(site));
}
// hist tests
List <String> validHist = new List <String>()
{
"8000", "8002", "8005", "8290", "9992"
};
List <String> invalidHist = new List <String>()
{
"8006", "9993"
};
foreach (String hist in validHist)
{
Assert.IsTrue(provider.getValidHistologies().Contains(hist));
}
foreach (String hist in invalidHist)
{
Assert.IsFalse(provider.getValidHistologies().Contains(hist));
}
}
public void testSplitValues()
{
Assert.AreEqual(0, StagingDataProvider.splitValues(null).Count);
Assert.AreEqual(1, StagingDataProvider.splitValues("").Count);
Assert.AreEqual(1, StagingDataProvider.splitValues("*").Count);
Assert.AreEqual(1, StagingDataProvider.splitValues("1 2 3").Count);
Assert.AreEqual(1, StagingDataProvider.splitValues("23589258625086").Count);
Assert.AreEqual(2, StagingDataProvider.splitValues("A,B").Count);
Assert.AreEqual(2, StagingDataProvider.splitValues(" A , B ").Count);
Assert.AreEqual(2, StagingDataProvider.splitValues("A , B").Count);
Assert.AreEqual(10, StagingDataProvider.splitValues("A,B,C,D,E,F,G,H,I,J").Count);
List <Range> ranges = StagingDataProvider.splitValues(",1,2,3,4");
Assert.AreEqual(5, ranges.Count);
Assert.AreEqual("", ranges[0].getLow());
Assert.AreEqual("", ranges[0].getHigh());
ranges = StagingDataProvider.splitValues(" ,1,2,3,4");
Assert.AreEqual(5, ranges.Count);
Assert.AreEqual("", ranges[0].getLow());
Assert.AreEqual("", ranges[0].getHigh());
ranges = StagingDataProvider.splitValues("1,2,3,4,");
Assert.AreEqual(5, ranges.Count);
Assert.AreEqual("", ranges[4].getLow());
Assert.AreEqual("", ranges[4].getHigh());
ranges = StagingDataProvider.splitValues("1,2,3,4, ");
Assert.AreEqual(5, ranges.Count);
Assert.AreEqual("", ranges[4].getLow());
Assert.AreEqual("", ranges[4].getHigh());
ranges = StagingDataProvider.splitValues("1,11,111-222");
Assert.AreEqual(3, ranges.Count);
Assert.AreEqual("1", ranges[0].getLow());
Assert.AreEqual("1", ranges[0].getHigh());
Assert.AreEqual("11", ranges[1].getLow());
Assert.AreEqual("11", ranges[1].getHigh());
Assert.AreEqual("111", ranges[2].getLow());
Assert.AreEqual("222", ranges[2].getHigh());
ranges = StagingDataProvider.splitValues("88,90-95,99");
Assert.AreEqual(3, ranges.Count);
Assert.AreEqual("88", ranges[0].getLow());
Assert.AreEqual("88", ranges[0].getHigh());
Assert.AreEqual("90", ranges[1].getLow());
Assert.AreEqual("95", ranges[1].getHigh());
Assert.AreEqual("99", ranges[2].getLow());
Assert.AreEqual("99", ranges[2].getHigh());
ranges = StagingDataProvider.splitValues("p0I-");
Assert.AreEqual(1, ranges.Count);
Assert.AreEqual("p0I-", ranges[0].getLow());
Assert.AreEqual("p0I-", ranges[0].getHigh());
ranges = StagingDataProvider.splitValues("N0(mol-)");
Assert.AreEqual(1, ranges.Count);
Assert.AreEqual("N0(mol-)", ranges[0].getLow());
Assert.AreEqual("N0(mol-)", ranges[0].getHigh());
// test numeric ranges
ranges = StagingDataProvider.splitValues("1-21");
Assert.AreEqual(1, ranges.Count);
Assert.AreEqual("1", ranges[0].getLow());
Assert.AreEqual("21", ranges[0].getHigh());
ranges = StagingDataProvider.splitValues("21-111");
Assert.AreEqual(1, ranges.Count);
Assert.AreEqual("21", ranges[0].getLow());
Assert.AreEqual("111", ranges[0].getHigh());
}
public void testExtraInput()
{
StagingTable table = new StagingTable();
table.setId("test_table");
StagingColumnDefinition def1 = new StagingColumnDefinition();
def1.setKey("input1");
def1.setName("Input 1");
def1.setType(ColumnType.INPUT);
StagingColumnDefinition def2 = new StagingColumnDefinition();
def2.setKey("result1");
def2.setName("Result1");
def2.setType(ColumnType.ENDPOINT);
table.setColumnDefinitions(new List <IColumnDefinition>()
{
def1, def2
});
table.setRawRows(new List <List <String> >());
table.getRawRows().Add(new List <String>()
{
"1", "MATCH"
});
table.getRawRows().Add(new List <String>()
{
"2", "VALUE:{{extra1}}"
});
table.getRawRows().Add(new List <String>()
{
"{{extra2}}", "MATCH"
});
table.getRawRows().Add(new List <String>()
{
"{{ctx_year_current}}", "MATCH"
});
table.getRawRows().Add(new List <String>()
{
"5", "VALUE:{{ctx_year_current}}"
});
table.getRawRows().Add(new List <String>()
{
"6", "MATCH:{{match_extra}}"
});
table.getRawRows().Add(new List <String>()
{
"7", "ERROR:{{error_extra}}"
});
StagingDataProvider.initTable(table);
HashSet <String> hash1 = new HashSet <String>()
{
"extra1", "extra2"
};
HashSet <String> hash2 = table.getExtraInput();
// since context variables are not user-supplied, they should not be included in the extra input
Assert.IsTrue(hash1.SetEquals(hash2));
table.setRawRows(new List <List <String> >());
table.getRawRows().Add(new List <String>()
{
"{{ctx_year_current}}", "MATCH"
});
StagingDataProvider.initTable(table);
Assert.IsNull(table.getExtraInput());
}
