public void RunAction()
{
switch (action)
{
case PulseAction.StartHemorrhage:
{
SEHemorrhage h = new SEHemorrhage();
h.SetCompartment(ExternalHemorrhageCmpt.RightLeg);
h.SetType(SEHemorrhage.eType.External);
h.GetRate().SetValue(50, VolumePerTimeUnit.mL_Per_min);
driver.engine.ProcessAction(h);
break;
}
case PulseAction.StopHemorrhage:
{
SEHemorrhage h = new SEHemorrhage();
h.SetCompartment(ExternalHemorrhageCmpt.RightLeg);
h.SetType(SEHemorrhage.eType.External);
h.GetRate().SetValue(0, VolumePerTimeUnit.mL_Per_min);
driver.engine.ProcessAction(h);
break;
}
case PulseAction.StartIVBag:
{
SESubstanceCompoundInfusion sci = new SESubstanceCompoundInfusion();
sci.SetSubstanceCompound(Compound.Saline);
sci.GetBagVolume().SetValue(500, VolumeUnit.mL);
sci.GetRate().SetValue(75, VolumePerTimeUnit.mL_Per_s);
driver.engine.ProcessAction(sci);
break;
}
case PulseAction.StopIVBag:
{
SESubstanceCompoundInfusion sci = new SESubstanceCompoundInfusion();
sci.SetSubstanceCompound(Compound.Saline);
sci.GetBagVolume().SetValue(0, VolumeUnit.mL);
sci.GetRate().SetValue(0, VolumePerTimeUnit.mL_Per_s);
driver.engine.ProcessAction(sci);
break;
}
case PulseAction.StartSuccinylcholineInfusion:
{
SESubstanceInfusion si = new SESubstanceInfusion();
si.SetSubstance(Substance.Succinylcholine);
si.GetConcentration().SetValue(5000, MassPerVolumeUnit.ug_Per_mL);
si.GetRate().SetValue(100, VolumePerTimeUnit.mL_Per_min);
driver.engine.ProcessAction(si);
break;
}
case PulseAction.StopSuccinylcholineInfusion:
{
SESubstanceInfusion si = new SESubstanceInfusion();
si.SetSubstance(Substance.Succinylcholine);
si.GetRate().SetValue(0, VolumePerTimeUnit.mL_Per_min);
driver.engine.ProcessAction(si);
break;
}
case PulseAction.InjectMorphine:
{
SESubstanceBolus bo = new SESubstanceBolus();
bo.SetSubstance(Substance.Morphine);
bo.GetConcentration().SetValue(10, MassPerVolumeUnit.mg_Per_mL);
bo.GetDose().SetValue(1, VolumeUnit.mL);
bo.SetAdminRoute(SESubstanceBolus.eAdministration.Intravenous);
driver.engine.ProcessAction(bo);
break;
}
case PulseAction.TensionPneumothorax:
{
SETensionPneumothorax tp = new SETensionPneumothorax();
tp.SetSide(eSide.Left);
tp.SetType(eGate.Open);
tp.GetSeverity().SetValue(0.65);
driver.engine.ProcessAction(tp);
break;
}
case PulseAction.NeedleDecompressions:
{
SENeedleDecompression nd = new SENeedleDecompression();
nd.SetSide(eSide.Left);
nd.SetState(eSwitch.On);
driver.engine.ProcessAction(nd);
break;
}
case PulseAction.StartAirwayObstruction:
{
SEAirwayObstruction ao = new SEAirwayObstruction();
ao.GetSeverity().SetValue(0.7);
driver.engine.ProcessAction(ao);
break;
}
case PulseAction.StopAirwayObstruction:
{
SEAirwayObstruction ao = new SEAirwayObstruction();
ao.GetSeverity().SetValue(0.0);
driver.engine.ProcessAction(ao);
break;
}
case PulseAction.StartIntubation:
{
SEIntubation tub = new SEIntubation();
tub.SetType(SEIntubation.eType.Tracheal);
driver.engine.ProcessAction(tub);
break;
}
case PulseAction.StopIntubation:
{
SEIntubation tub = new SEIntubation();
tub.SetType(SEIntubation.eType.Off);
driver.engine.ProcessAction(tub);
break;
}
case PulseAction.VentilateIntubation:
{
SEAnesthesiaMachineConfiguration am = new SEAnesthesiaMachineConfiguration();
am.GetConfiguration().SetConnection(SEAnesthesiaMachine.Connection.Tube);
am.GetConfiguration().GetInletFlow().SetValue(5, VolumePerTimeUnit.L_Per_min);
am.GetConfiguration().GetInspiratoryExpiratoryRatio().SetValue(0.5);
am.GetConfiguration().GetOxygenFraction().SetValue(0.23);
am.GetConfiguration().SetOxygenSource(SEAnesthesiaMachine.OxygenSource.Wall);
am.GetConfiguration().GetPositiveEndExpiredPressure().SetValue(1, PressureUnit.cmH2O);
am.GetConfiguration().SetPrimaryGas(SEAnesthesiaMachine.PrimaryGas.Nitrogen);
am.GetConfiguration().GetRespiratoryRate().SetValue(16, FrequencyUnit.Per_min);
am.GetConfiguration().GetVentilatorPressure().SetValue(10.5, PressureUnit.cmH2O);
driver.engine.ProcessAction(am);
break;
}
case PulseAction.VentilateMask:
{
SEAnesthesiaMachineConfiguration am = new SEAnesthesiaMachineConfiguration();
am.GetConfiguration().SetConnection(SEAnesthesiaMachine.Connection.Mask);
am.GetConfiguration().GetInletFlow().SetValue(5, VolumePerTimeUnit.L_Per_min);
am.GetConfiguration().GetInspiratoryExpiratoryRatio().SetValue(0.5);
am.GetConfiguration().GetOxygenFraction().SetValue(0.23);
am.GetConfiguration().SetOxygenSource(SEAnesthesiaMachine.OxygenSource.Wall);
am.GetConfiguration().GetPositiveEndExpiredPressure().SetValue(1, PressureUnit.cmH2O);
am.GetConfiguration().SetPrimaryGas(SEAnesthesiaMachine.PrimaryGas.Nitrogen);
am.GetConfiguration().GetRespiratoryRate().SetValue(16, FrequencyUnit.Per_min);
am.GetConfiguration().GetVentilatorPressure().SetValue(10.5, PressureUnit.cmH2O);
driver.engine.ProcessAction(am);
break;
}
}
}
//!
//! Very Terse testing of the SWIG_Bindings
//!
//! We will simply test the ability
//! 1. Create a logger and log to a file
//! 2. Initialize a BioGearsEngine
//! 3. Advance Model Time
//! 4. Apply Actions to an exsiting BioGearsEngine
//! 5. Create and Apply all BioGears Actions
static void Main(string[] args)
{
var logger = new Logger("");
logger.Warning("Perfect Now lets Try to compliate things with two modules!");
var percent = new SEScalar0To1();
percent.SetValue(0.1);
logger.Info(String.Format("{0}", percent.GetValue()));
var time = new SEScalarTime();
time.SetValue(4, TimeUnit.s);
logger.Info(String.Format("{0}", time.GetValue()));
var engine = new BioGearsEngine(logger);
engine.InitializeEngine("StandardMale.xml");
engine.AdvanceModelTime();
engine.AdvanceModelTimeBy(2.0, TimeUnit.s);
var eh = new BioGearsEventHandler();
engine.SetEventHandler(eh);
var acuteStress = new SEAcuteStress();
acuteStress.GetSeverity().SetValue(.75);
logger.Warning(String.Format("AcuteStress @ Severity {0}", acuteStress.GetSeverity().GetValue()));
engine.ProcessAction(acuteStress);
engine.AdvanceModelTimeBy(2.0, TimeUnit.s);
var severity = acuteStress.GetSeverity();
severity.SetValue(0.5);
engine.AdvanceModelTimeBy(2.0, TimeUnit.s);
SEBurnWound m_burnWound = new SEBurnWound();
m_burnWound.GetTotalBodySurfaceArea().SetValue(50.0 / 100.0);
engine.ProcessAction(m_burnWound);
engine.AdvanceModelTimeBy(2.0, TimeUnit.s);
var m_substances = engine.GetSubstanceManager();
var m_albumine = m_substances.GetSubstance("Albumin");
var m_saline = m_substances.GetCompound("Saline");
try {
var m_SubstanceBolus = new SESubstanceBolus(m_albumine);
var m_SubstanceInfusion = new SESubstanceInfusion(m_albumine);
var m_SubstanceNasalDose = new SESubstanceNasalDose(m_albumine);
var m_SubstanceOralDose = new SESubstanceOralDose(m_albumine);
} catch (global::System.Exception /*ex*/) {
logger.Error("Definition of Albumin is missing. Unable to test Substance Actions");
}
try {
var m_SubstanceCompoundInfusion = new SESubstanceCompoundInfusion(m_saline);
} catch (global::System.Exception /*ex*/) {
logger.Error("Definition of Saline is missing. Unable to test SubstanceCompound Actions");
}
var m_TensionPneumothorax = new SETensionPneumothorax();
var m_Tourniquet = new SETourniquet();
var m_Urinate = new SEUrinate();
var m_UseInhaler = new SEUseInhaler();
var patient = engine.GetPatient();
bool isTacycardia = patient.IsEventActive(CDM.enumPatientEvent.value.Tachycardia);
bool isAlive = patient.IsEventActive(CDM.enumPatientEvent.value.IrreversibleState);
bool isKetoacidosis = patient.IsEventActive(CDM.enumPatientEvent.value.Ketoacidosis);
logger.Warning(String.Format("AcuteStress @ Severity {0}", acuteStress.GetSeverity().GetValue()));
//!
//! Very Quick Example of how to use Data Tracks to Poll data
//! Performance wise this should really only be used for non PhysiologyDataRequest
//!
var HeartRateRequest = engine.GetEngineTrack().GetDataRequestManager().CreatePhysiologyDataRequest(); HeartRateRequest.Set("HeartRate", FrequencyUnit.Per_min);
var SystolicArterialPressureRequest = engine.GetEngineTrack().GetDataRequestManager().CreatePhysiologyDataRequest(); SystolicArterialPressureRequest.Set("SystolicArterialPressure", PressureUnit.mmHg);
var DiastolicArterialPressureRequest = engine.GetEngineTrack().GetDataRequestManager().CreatePhysiologyDataRequest(); DiastolicArterialPressureRequest.Set("DiastolicArterialPressure", PressureUnit.mmHg);
var RespirationRateRequest = engine.GetEngineTrack().GetDataRequestManager().CreatePhysiologyDataRequest(); RespirationRateRequest.Set("RespirationRate", FrequencyUnit.Per_min);
var TidalVolumeRequest = engine.GetEngineTrack().GetDataRequestManager().CreatePhysiologyDataRequest(); TidalVolumeRequest.Set("TidalVolume", VolumeUnit.mL);
var TotalLungVolumeRequest = engine.GetEngineTrack().GetDataRequestManager().CreatePhysiologyDataRequest(); TotalLungVolumeRequest.Set("TotalLungVolume", VolumeUnit.mL);
var OxygenSaturationRequest = engine.GetEngineTrack().GetDataRequestManager().CreatePhysiologyDataRequest(); OxygenSaturationRequest.Set("OxygenSaturation");
//TODO: Get Substance and GetSubstanceCompound need better exception handeling
var oxygen = engine.GetSubstanceManager().GetSubstance("Oxygen");
var carbonDioxide = engine.GetSubstanceManager().GetSubstance("CarbonDioxide");
//Final exonicus data requests
var ecg = engine.GetEngineTrack().GetDataRequestManager().CreateEquipmentDataRequest(); ecg.SetDataRequestType("ECG"); ecg.Set("Lead3ElectricPotential", ElectricPotentialUnit.mV);
var MeanUrineRequest = engine.GetEngineTrack().GetDataRequestManager().CreatePhysiologyDataRequest(); MeanUrineRequest.Set("MeanUrineOutput", VolumePerTimeUnit.mL_Per_hr);
var BrainVasculatureRequest = engine.GetEngineTrack().GetDataRequestManager().CreateLiquidCompartmentDataRequest(); BrainVasculatureRequest.Set("BrainVasculature", oxygen, "PartialPressure", PressureUnit.mmHg);
var TracheaPartialPressure = engine.GetEngineTrack().GetDataRequestManager().CreateGasCompartmentDataRequest(); TracheaPartialPressure.Set("Trachea", carbonDioxide, "PartialPressure", PressureUnit.mmHg);
engine.GetEngineTrack().SetupRequests();
var HeartRate = engine.GetEngineTrack().GetScalar(HeartRateRequest);
var SystolicArterialPressure = engine.GetEngineTrack().GetScalar(HeartRateRequest);
var DiastolicArterialPressure = engine.GetEngineTrack().GetScalar(DiastolicArterialPressureRequest);
var RespirationRate = engine.GetEngineTrack().GetScalar(RespirationRateRequest);
var TidalVolume = engine.GetEngineTrack().GetScalar(TidalVolumeRequest);
var TotalLungVolume = engine.GetEngineTrack().GetScalar(TotalLungVolumeRequest);
var OxygenSaturation = engine.GetEngineTrack().GetScalar(OxygenSaturationRequest);
var PartialPressure = engine.GetEngineTrack().GetScalar(BrainVasculatureRequest);
var CO2PartialPressure = engine.GetEngineTrack().GetScalar(TracheaPartialPressure);
var Urine = engine.GetEngineTrack().GetScalar(MeanUrineRequest);
var ecgData = engine.GetEngineTrack().GetScalar(ecg);
apply_acute_respiratory_distress(engine);
engine.GetEngineTrack().PullData();
logger.Info(HeartRate.ToString());
logger.Info(SystolicArterialPressure.ToString());
logger.Info(DiastolicArterialPressure.ToString());
logger.Info(RespirationRate.ToString());
logger.Info(TidalVolume.ToString());
logger.Info(TotalLungVolume.ToString());
logger.Info(OxygenSaturation.ToString());
logger.Info(PartialPressure.ToString());
logger.Info(CO2PartialPressure.ToString());
logger.Info(Urine.ToString());
logger.Info("ecg: \n");
logger.Info(ecgData.ToString());
//!
//! Just to test most actions we will apply and unapply every action in 2 second sperts
//!
apply_acute_stress(engine);
engine.GetEngineTrack().PullData();
apply_airway_obstruction(engine);
engine.GetEngineTrack().PullData();
apply_apnea(engine);
engine.GetEngineTrack().PullData();
apply_asthma_attack(engine);
engine.GetEngineTrack().PullData();
apply_brain_injury(engine);
engine.GetEngineTrack().PullData();
apply_breath_hold(engine);
engine.GetEngineTrack().PullData();
apply_bronchoconstriction(engine);
engine.GetEngineTrack().PullData();
apply_burn_wound(engine);
engine.GetEngineTrack().PullData();
apply_cardiac_arrest(engine);
engine.GetEngineTrack().PullData();
logger.Info(HeartRate.ToString());
logger.Info(SystolicArterialPressure.ToString());
logger.Info(DiastolicArterialPressure.ToString());
logger.Info(RespirationRate.ToString());
logger.Info(TidalVolume.ToString());
logger.Info(TotalLungVolume.ToString());
logger.Info(OxygenSaturation.ToString());
apply_chest_compression(engine);
engine.GetEngineTrack().PullData();
apply_chest_compression_force(engine);
engine.GetEngineTrack().PullData();
apply_chest_compression_force_scale(engine);
engine.GetEngineTrack().PullData();
apply_chest_occlusive_dressing(engine);
engine.GetEngineTrack().PullData();
apply_conscious_respiration(engine);
engine.GetEngineTrack().PullData();
apply_consume_nutrients(engine);
engine.GetEngineTrack().PullData();
apply_exercise(engine);
engine.GetEngineTrack().PullData();
apply_cycling_exercise(engine);
engine.GetEngineTrack().PullData();
apply_generic_exercise(engine);
engine.GetEngineTrack().PullData();
apply_running_exercise(engine);
engine.GetEngineTrack().PullData();
apply_strength_exercise(engine);
engine.GetEngineTrack().PullData();
apply_hemorrhage(engine);
engine.GetEngineTrack().PullData();
apply_infection(engine);
engine.GetEngineTrack().PullData();
apply_intubation(engine);
engine.GetEngineTrack().PullData();
apply_mechanical_ventilation(engine);
engine.GetEngineTrack().PullData();
apply_needle_decompression(engine);
engine.GetEngineTrack().PullData();
apply_override(engine);
engine.GetEngineTrack().PullData();
apply_pain_stimulus(engine);
engine.GetEngineTrack().PullData();
apply_patient_assessment_request(engine);
engine.GetEngineTrack().PullData();
apply_pericadial_effusion(engine);
engine.GetEngineTrack().PullData();
logger.Info(HeartRate.ToString());
logger.Info(SystolicArterialPressure.ToString());
logger.Info(DiastolicArterialPressure.ToString());
logger.Info(RespirationRate.ToString());
logger.Info(TidalVolume.ToString());
logger.Info(TotalLungVolume.ToString());
logger.Info(OxygenSaturation.ToString());
apply_pulmonary_shunt(engine);
engine.GetEngineTrack().PullData();
apply_sleep(engine);
engine.GetEngineTrack().PullData();
logger.Info(HeartRate.ToString());
logger.Info(SystolicArterialPressure.ToString());
logger.Info(DiastolicArterialPressure.ToString());
logger.Info(RespirationRate.ToString());
logger.Info(TidalVolume.ToString());
logger.Info(TotalLungVolume.ToString());
logger.Info(OxygenSaturation.ToString());
var AMConfig = new SEAnesthesiaMachineConfiguration(engine.GetSubstanceManager());
var config = AMConfig.GetConfiguration();
config.SetConnection(CDM.enumAnesthesiaMachineConnection.value.Mask);
config.GetInletFlow().SetValue(2.0, VolumePerTimeUnit.L_Per_min);
config.GetInspiratoryExpiratoryRatio().SetValue(.5);
config.GetOxygenFraction().SetValue(.5);
config.SetOxygenSource(CDM.enumAnesthesiaMachineOxygenSource.value.Wall);
config.GetPositiveEndExpiredPressure().SetValue(0.0, PressureUnit.cmH2O);
config.SetPrimaryGas(CDM.enumAnesthesiaMachinePrimaryGas.value.Nitrogen);
config.GetReliefValvePressure().SetValue(20.0, PressureUnit.cmH2O);
config.GetRespiratoryRate().SetValue(12, FrequencyUnit.Per_min);
config.GetVentilatorPressure().SetValue(0.0, PressureUnit.cmH2O);
config.GetOxygenBottleOne().GetVolume().SetValue(660.0, VolumeUnit.L);
config.GetOxygenBottleTwo().GetVolume().SetValue(660.0, VolumeUnit.L);
engine.ProcessAction(AMConfig);
engine.AdvanceModelTimeBy(2.0, TimeUnit.s);
config.GetInletFlow().SetValue(5.0, VolumePerTimeUnit.L_Per_min);
config.GetPositiveEndExpiredPressure().SetValue(3.0, PressureUnit.cmH2O);
config.GetVentilatorPressure().SetValue(22.0, PressureUnit.cmH2O);
engine.ProcessAction(AMConfig);
engine.AdvanceModelTimeBy(2.0, TimeUnit.s);
config.GetInspiratoryExpiratoryRatio().SetValue(1.0);
config.GetPositiveEndExpiredPressure().SetValue(1.0, PressureUnit.cmH2O);
config.GetRespiratoryRate().SetValue(18.0, FrequencyUnit.Per_min);
config.GetVentilatorPressure().SetValue(10.0, PressureUnit.cmH2O);
engine.ProcessAction(AMConfig);
engine.AdvanceModelTimeBy(2.0, TimeUnit.s);
var AMleak = new SEMaskLeak();
AMleak.GetSeverity().SetValue(0.5);
engine.ProcessAction(AMleak);
engine.GetLogger().Info("Removing the mask leak.");
engine.AdvanceModelTimeBy(2.0, TimeUnit.s);
var AMpressureloss = new SEOxygenWallPortPressureLoss();
AMpressureloss.SetActive(true);
engine.ProcessAction(AMpressureloss);
engine.GetLogger().Info("Testing the oxygen pressure loss failure mode. The oxygen pressure from the wall source is dropping.");
AMpressureloss.SetActive(false);
engine.ProcessAction(AMpressureloss);
engine.GetLogger().Info("Removing the wall oxygen pressure loss action.");
engine.AdvanceModelTimeBy(2, TimeUnit.s);
engine.SaveStateToFile("*****@*****.**");
Console.Write("Simulation Finished Press any key to continue");
var testString = Console.ReadLine();
}
