/// <summary>
/// Initializes a new instance of the <see cref="CosmosFhirOperationDataStore"/> class.
/// </summary>
/// <param name="documentClientScope">The factory for <see cref="IDocumentClient"/>.</param>
/// <param name="cosmosDataStoreConfiguration">The data store configuration.</param>
/// <param name="namedCosmosCollectionConfigurationAccessor">The IOptions accessor to get a named version.</param>
/// <param name="retryExceptionPolicyFactory">The retry exception policy factory.</param>
/// <param name="logger">The logger.</param>
public CosmosFhirOperationDataStore(
IScoped <IDocumentClient> documentClientScope,
CosmosDataStoreConfiguration cosmosDataStoreConfiguration,
IOptionsMonitor <CosmosCollectionConfiguration> namedCosmosCollectionConfigurationAccessor,
RetryExceptionPolicyFactory retryExceptionPolicyFactory,
ILogger <CosmosFhirOperationDataStore> logger)
{
EnsureArg.IsNotNull(documentClientScope, nameof(documentClientScope));
EnsureArg.IsNotNull(cosmosDataStoreConfiguration, nameof(cosmosDataStoreConfiguration));
EnsureArg.IsNotNull(namedCosmosCollectionConfigurationAccessor, nameof(namedCosmosCollectionConfigurationAccessor));
EnsureArg.IsNotNull(retryExceptionPolicyFactory, nameof(retryExceptionPolicyFactory));
EnsureArg.IsNotNull(logger, nameof(logger));
_documentClientScope = documentClientScope;
_retryExceptionPolicyFactory = retryExceptionPolicyFactory;
_logger = logger;
CosmosCollectionConfiguration collectionConfiguration = namedCosmosCollectionConfigurationAccessor.Get(Constants.CollectionConfigurationName);
DatabaseId = cosmosDataStoreConfiguration.DatabaseId;
CollectionId = collectionConfiguration.CollectionId;
CollectionUri = cosmosDataStoreConfiguration.GetRelativeCollectionUri(collectionConfiguration.CollectionId);
}
/// <summary>
/// Initializes a new instance of the <see cref="CosmosFhirOperationDataStore"/> class.
/// </summary>
/// <param name="containerScope">The factory for <see cref="Container"/>.</param>
/// <param name="cosmosDataStoreConfiguration">The data store configuration.</param>
/// <param name="namedCosmosCollectionConfigurationAccessor">The IOptions accessor to get a named version.</param>
/// <param name="retryExceptionPolicyFactory">The retry exception policy factory.</param>
/// <param name="queryFactory">The Query Factory</param>
/// <param name="logger">The logger.</param>
public CosmosFhirOperationDataStore(
IScoped <Container> containerScope,
CosmosDataStoreConfiguration cosmosDataStoreConfiguration,
IOptionsMonitor <CosmosCollectionConfiguration> namedCosmosCollectionConfigurationAccessor,
RetryExceptionPolicyFactory retryExceptionPolicyFactory,
ICosmosQueryFactory queryFactory,
ILogger <CosmosFhirOperationDataStore> logger)
{
EnsureArg.IsNotNull(containerScope, nameof(containerScope));
EnsureArg.IsNotNull(cosmosDataStoreConfiguration, nameof(cosmosDataStoreConfiguration));
EnsureArg.IsNotNull(namedCosmosCollectionConfigurationAccessor, nameof(namedCosmosCollectionConfigurationAccessor));
EnsureArg.IsNotNull(retryExceptionPolicyFactory, nameof(retryExceptionPolicyFactory));
EnsureArg.IsNotNull(logger, nameof(logger));
_containerScope = containerScope;
_retryExceptionPolicyFactory = retryExceptionPolicyFactory;
_queryFactory = queryFactory;
_logger = logger;
CosmosCollectionConfiguration collectionConfiguration = namedCosmosCollectionConfigurationAccessor.Get(Constants.CollectionConfigurationName);
DatabaseId = cosmosDataStoreConfiguration.DatabaseId;
CollectionId = collectionConfiguration.CollectionId;
}
public ControlPlaneDataStore(
IScoped <IDocumentClient> documentClient,
CosmosDataStoreConfiguration cosmosDataStoreConfiguration,
ICosmosDocumentQueryFactory cosmosDocumentQueryFactory,
RetryExceptionPolicyFactory retryExceptionPolicyFactory,
IOptionsMonitor <CosmosCollectionConfiguration> namedCosmosCollectionConfigurationAccessor,
ILogger <ControlPlaneDataStore> logger)
{
EnsureArg.IsNotNull(documentClient, nameof(documentClient));
EnsureArg.IsNotNull(cosmosDataStoreConfiguration, nameof(cosmosDataStoreConfiguration));
EnsureArg.IsNotNull(cosmosDocumentQueryFactory, nameof(cosmosDocumentQueryFactory));
EnsureArg.IsNotNull(retryExceptionPolicyFactory, nameof(retryExceptionPolicyFactory));
EnsureArg.IsNotNull(namedCosmosCollectionConfigurationAccessor, nameof(namedCosmosCollectionConfigurationAccessor));
EnsureArg.IsNotNull(logger, nameof(logger));
var collectionConfig = namedCosmosCollectionConfigurationAccessor.Get(Constants.CollectionConfigurationName);
_documentClient = documentClient;
_collectionUri = cosmosDataStoreConfiguration.GetRelativeCollectionUri(collectionConfig.CollectionId);
_cosmosDocumentQueryFactory = cosmosDocumentQueryFactory;
_retryExceptionPolicyFactory = retryExceptionPolicyFactory;
_logger = logger;
_hardDeleteIdentityProvider = new HardDeleteIdentityProvider();
}
public async Task InitializeAsync()
{
var fhirStoredProcs = typeof(IStoredProcedure).Assembly
.GetTypes()
.Where(x => !x.IsAbstract && typeof(IStoredProcedure).IsAssignableFrom(x))
.ToArray()
.Select(type => (IStoredProcedure)Activator.CreateInstance(type));
var optionsMonitor = Substitute.For <IOptionsMonitor <CosmosCollectionConfiguration> >();
optionsMonitor.Get(CosmosDb.Constants.CollectionConfigurationName).Returns(_cosmosCollectionConfiguration);
_fhirRequestContextAccessor.RequestContext.CorrelationId.Returns(Guid.NewGuid().ToString());
_fhirRequestContextAccessor.RequestContext.RouteName.Returns("routeName");
_searchParameterDefinitionManager = new SearchParameterDefinitionManager(ModelInfoProvider.Instance, _mediator, () => _searchService.CreateMockScope(), NullLogger <SearchParameterDefinitionManager> .Instance);
await _searchParameterDefinitionManager.StartAsync(CancellationToken.None);
_supportedSearchParameterDefinitionManager = new SupportedSearchParameterDefinitionManager(_searchParameterDefinitionManager);
var searchableSearchParameterDefinitionManager = new SearchableSearchParameterDefinitionManager(_searchParameterDefinitionManager, _fhirRequestContextAccessor);
_filebasedSearchParameterStatusDataStore = new FilebasedSearchParameterStatusDataStore(_searchParameterDefinitionManager, ModelInfoProvider.Instance);
IMediator mediator = Substitute.For <IMediator>();
var updaters = new ICollectionUpdater[]
{
new FhirCollectionSettingsUpdater(_cosmosDataStoreConfiguration, optionsMonitor, NullLogger <FhirCollectionSettingsUpdater> .Instance),
new StoredProcedureInstaller(fhirStoredProcs),
new CosmosDbSearchParameterStatusInitializer(
() => _filebasedSearchParameterStatusDataStore,
new CosmosQueryFactory(
new CosmosResponseProcessor(_fhirRequestContextAccessor, mediator, Substitute.For <ICosmosQueryLogger>(), NullLogger <CosmosResponseProcessor> .Instance),
NullFhirCosmosQueryLogger.Instance),
_cosmosDataStoreConfiguration),
};
var dbLock = new CosmosDbDistributedLockFactory(Substitute.For <Func <IScoped <Container> > >(), NullLogger <CosmosDbDistributedLock> .Instance);
var upgradeManager = new CollectionUpgradeManager(updaters, _cosmosDataStoreConfiguration, optionsMonitor, dbLock, NullLogger <CollectionUpgradeManager> .Instance);
ICosmosClientTestProvider testProvider = new CosmosClientReadWriteTestProvider();
var cosmosResponseProcessor = Substitute.For <ICosmosResponseProcessor>();
var responseProcessor = new CosmosResponseProcessor(_fhirRequestContextAccessor, mediator, Substitute.For <ICosmosQueryLogger>(), NullLogger <CosmosResponseProcessor> .Instance);
var handler = new FhirCosmosResponseHandler(() => new NonDisposingScope(_container), _cosmosDataStoreConfiguration, _fhirRequestContextAccessor, responseProcessor);
var retryExceptionPolicyFactory = new RetryExceptionPolicyFactory(_cosmosDataStoreConfiguration, _fhirRequestContextAccessor);
var documentClientInitializer = new FhirCosmosClientInitializer(testProvider, () => new[] { handler }, retryExceptionPolicyFactory, NullLogger <FhirCosmosClientInitializer> .Instance);
_cosmosClient = documentClientInitializer.CreateCosmosClient(_cosmosDataStoreConfiguration);
var fhirCollectionInitializer = new CollectionInitializer(_cosmosCollectionConfiguration, _cosmosDataStoreConfiguration, upgradeManager, retryExceptionPolicyFactory, testProvider, NullLogger <CollectionInitializer> .Instance);
// Cosmos DB emulators throws errors when multiple collections are initialized concurrently.
// Use the semaphore to only allow one initialization at a time.
await CollectionInitializationSemaphore.WaitAsync();
try
{
await documentClientInitializer.InitializeDataStore(_cosmosClient, _cosmosDataStoreConfiguration, new List <ICollectionInitializer> {
fhirCollectionInitializer
});
_container = documentClientInitializer.CreateFhirContainer(_cosmosClient, _cosmosDataStoreConfiguration.DatabaseId, _cosmosCollectionConfiguration.CollectionId);
}
finally
{
CollectionInitializationSemaphore.Release();
}
var cosmosDocumentQueryFactory = new CosmosQueryFactory(cosmosResponseProcessor, NullFhirCosmosQueryLogger.Instance);
var documentClient = new NonDisposingScope(_container);
_searchParameterStatusDataStore = new CosmosDbSearchParameterStatusDataStore(
() => documentClient,
_cosmosDataStoreConfiguration,
cosmosDocumentQueryFactory);
IOptions <CoreFeatureConfiguration> options = Options.Create(new CoreFeatureConfiguration());
_fhirDataStore = new CosmosFhirDataStore(
documentClient,
_cosmosDataStoreConfiguration,
optionsMonitor,
cosmosDocumentQueryFactory,
retryExceptionPolicyFactory,
NullLogger <CosmosFhirDataStore> .Instance,
options,
new Lazy <ISupportedSearchParameterDefinitionManager>(_supportedSearchParameterDefinitionManager),
ModelInfoProvider.Instance);
_fhirOperationDataStore = new CosmosFhirOperationDataStore(
documentClient,
_cosmosDataStoreConfiguration,
optionsMonitor,
retryExceptionPolicyFactory,
new CosmosQueryFactory(responseProcessor, new NullFhirCosmosQueryLogger()),
NullLogger <CosmosFhirOperationDataStore> .Instance);
var searchParameterExpressionParser = new SearchParameterExpressionParser(new ReferenceSearchValueParser(_fhirRequestContextAccessor));
var expressionParser = new ExpressionParser(() => searchableSearchParameterDefinitionManager, searchParameterExpressionParser);
var searchOptionsFactory = new SearchOptionsFactory(expressionParser, () => searchableSearchParameterDefinitionManager, options, _fhirRequestContextAccessor, Substitute.For <ISortingValidator>(), NullLogger <SearchOptionsFactory> .Instance);
ICosmosDbCollectionPhysicalPartitionInfo cosmosDbPhysicalPartitionInfo = Substitute.For <ICosmosDbCollectionPhysicalPartitionInfo>();
cosmosDbPhysicalPartitionInfo.PhysicalPartitionCount.Returns(1);
_searchService = new FhirCosmosSearchService(
searchOptionsFactory,
_fhirDataStore,
new QueryBuilder(),
_fhirRequestContextAccessor,
_cosmosDataStoreConfiguration,
cosmosDbPhysicalPartitionInfo,
new QueryPartitionStatisticsCache(),
Enumerable.Empty <ICosmosExpressionRewriter>(),
NullLogger <FhirCosmosSearchService> .Instance);
await _searchParameterDefinitionManager.EnsureInitializedAsync(CancellationToken.None);
ISearchParameterSupportResolver searchParameterSupportResolver = Substitute.For <ISearchParameterSupportResolver>();
searchParameterSupportResolver.IsSearchParameterSupported(Arg.Any <SearchParameterInfo>()).Returns((true, false));
_searchParameterStatusManager = new SearchParameterStatusManager(
_searchParameterStatusDataStore,
_searchParameterDefinitionManager,
searchParameterSupportResolver,
mediator,
NullLogger <SearchParameterStatusManager> .Instance);
_fhirStorageTestHelper = new CosmosDbFhirStorageTestHelper(_container);
}
