Example #1
0
        /// <summary>
        /// <summary>
        public static void TestQuantileCalculation(String[] args)
        {
            int size = int.Parse(args[0]);
            int b = int.Parse(args[1]);
            int k = int.Parse(args[2]);
            //cern.it.util.Log.enableLogging(args[3].Equals("log"));
            int chunks = int.Parse(args[4]);
            Boolean computeExactQuantilesAlso = args[5].Equals("exact");
            Boolean doShuffle = args[6].Equals("shuffle");
            double epsilon = Double.Parse(args[7]);
            double delta = Double.Parse(args[8]);
            int quantiles = int.Parse(args[9]);
            long max_N = long.Parse(args[10]);



            Console.WriteLine("free=" + Cern.Colt.Karnel.FreePhysicalMemorySize);
            Console.WriteLine("total=" + Cern.Colt.Karnel.TotalVisibleMemorySize);

            double[] phis = { 0.001, 0.01, 0.1, 0.5, 0.9, 0.99, 0.999, 1.0 };
            //int quantiles = phis.Length;

            Timer timer = new Timer();
            Timer timer2 = new Timer();
            IDoubleQuantileFinder approxFinder;

            approxFinder = QuantileFinderFactory.NewDoubleQuantileFinder(false, max_N, epsilon, delta, quantiles, null);
            Console.WriteLine(approxFinder);
            //new UnknownApproximateDoubleQuantileFinder(b,k);
            //approxFinder = new ApproximateDoubleQuantileFinder(b,k);
            /*
            double[] returnSamplingRate = new double[1];
            long[] result = ApproximateQuantileFinder.computeBestBandK(size*chunks, epsilon, delta, quantiles, returnSamplingRate);
            approxFinder = new ApproximateQuantileFinder((int) result[0], (int) result[1]);
            Console.WriteLine("epsilon="+epsilon);
            Console.WriteLine("delta="+delta);
            Console.WriteLine("samplingRate="+returnSamplingRate[0]);
            */


            IDoubleQuantileFinder exactFinder = QuantileFinderFactory.NewDoubleQuantileFinder(false, -1, 0.0, delta, quantiles, null);
            Console.WriteLine(exactFinder);

            DoubleArrayList list = new DoubleArrayList(size);

            for (int chunk = 0; chunk < chunks; chunk++)
            {
                list.Clear();
                int d = chunk * size;
                timer2.Start();
                for (int i = 0; i < size; i++)
                {
                    list.Add((double)(i + d));
                }
                timer2.Stop();



                //Console.WriteLine("unshuffled="+list);
                if (doShuffle)
                {
                    Timer timer3 = new Timer();
                    timer3.Start();

                    list.Shuffle();
                    Console.WriteLine("shuffling took " + timer3.Interval.ToString());

                    timer3.Stop();
                }
                //Console.WriteLine("shuffled="+list);
                //list.sort();
                //Console.WriteLine("sorted="+list);

                timer.Start();
                approxFinder.AddAllOf(list);
                timer.Stop();

                if (computeExactQuantilesAlso)
                {
                    exactFinder.AddAllOf(list);
                }

            }
            Console.WriteLine("list.Add() took" + timer2);
            Console.WriteLine("approxFinder.Add() took" + timer);

            //Console.WriteLine("free="+Cern.Colt.Karnel.FreePhysicalMemorySize);
            //Console.WriteLine("total="+Cern.Colt.Karnel.TotalVisibleMemorySize);

            timer.Stop();
            timer.Start();

            //approxFinder.close();
            DoubleArrayList approxQuantiles = approxFinder.QuantileElements(new DoubleArrayList(phis));

            Console.WriteLine(timer.Display);
            timer.Stop();

            Console.WriteLine("Phis=" + new DoubleArrayList(phis));
            Console.WriteLine("ApproxQuantiles=" + approxQuantiles);

            //Console.WriteLine("MaxLevel of full buffers="+maxLevelOfFullBuffers(approxFinder.bufferSet));

            //Console.WriteLine("total buffers filled="+ approxFinder.totalBuffersFilled);
            //Console.WriteLine("free="+Cern.Colt.Karnel.FreePhysicalMemorySize);
            //Console.WriteLine("total="+Cern.Colt.Karnel.TotalVisibleMemorySize);


            if (computeExactQuantilesAlso)
            {
                Console.WriteLine("Comparing with exact quantile computation...");

                timer.Reset();

                //exactFinder.close();
                DoubleArrayList exactQuantiles = exactFinder.QuantileElements(new DoubleArrayList(phis));
                Console.WriteLine(timer.Display);

                timer.Stop();

                Console.WriteLine("ExactQuantiles=" + exactQuantiles);


                //double[] errors1 = errors1(exactQuantiles.ToArray(), approxQuantiles.ToArray());
                //Console.WriteLine("Error1="+new DoubleArrayList(errors1));

                /*
                DoubleArrayList buffer = new DoubleArrayList((int)exactFinder.Count);
                exactFinder.forEach(
                    new cern.colt.function.DoubleFunction() {
                        public void apply(double element) {
                            buffer.Add(element);
                        }
                    }
                );
                */


                DoubleArrayList observedEpsilons = ObservedEpsilonsAtPhis(new DoubleArrayList(phis), (ExactDoubleQuantileFinder)exactFinder, approxFinder, epsilon);
                Console.WriteLine("observedEpsilons=" + observedEpsilons);

                double element = 1000.0f;


                Console.WriteLine("exact phi(" + element + ")=" + exactFinder.Phi(element));
                Console.WriteLine("apprx phi(" + element + ")=" + approxFinder.Phi(element));

                Console.WriteLine("exact elem(phi(" + element + "))=" + exactFinder.QuantileElements(new DoubleArrayList(new double[] { exactFinder.Phi(element) })));
                Console.WriteLine("apprx elem(phi(" + element + "))=" + approxFinder.QuantileElements(new DoubleArrayList(new double[] { approxFinder.Phi(element) })));
            }
        }
Example #2
0
        public void TestMain()
        {
            var path = NUnit.Framework.TestContext.CurrentContext.TestDirectory + "\\TestResult\\QuantileFinderTest\\";
            if (!Directory.Exists(path))
                Directory.CreateDirectory(path);

            var filename = path + "QuantileFinderTest.log";

            //Boolean known_N;
            //if (args==null) known_N = false;
            //else known_N = new Boolean(args[0]).BooleanValue();

            int[] quantiles = { 100, 10000 };
            //int[] quantiles = {1,100,10000};

            long[] sizes = { long.MaxValue, 1000000, 10000000, 100000000 };

            double[] deltas = { 0.0, 0.1, 0.00001 };
            //double[] deltas = {0.0, 0.001, 0.00001, 0.000001};

            //double[] epsilons = {0.0, 0.01, 0.001, 0.0001, 0.00001};
            double[] epsilons = { 0.0, 0.1, 0.01, 0.001, 0.0001, 0.00001, 0.000001 };


            try
            {
                using (StreamWriter writer = new StreamWriter(filename))
                {
                    //if (! known_N) sizes = new long[] {0};
                    writer.WriteLine("\n\n");
                    //if (known_N) 
                    //	Console.WriteLine("Computing b's and k's for KNOWN N");
                    //else 
                    //	Console.WriteLine("Computing b's and k's for UNKNOWN N");
                    writer.WriteLine("mem [System.Math.Round(elements/1000.0)]");
                    writer.WriteLine("***********************************");
                    Timer timer = new Timer();
                    timer.Start();

                    for (int q = 0; q < quantiles.Length; q++)
                    {
                        int p = quantiles[q];
                        writer.WriteLine("------------------------------");
                        writer.WriteLine("computing for p = " + p);
                        for (int s = 0; s < sizes.Length; s++)
                        {
                            long N = sizes[s];
                            writer.WriteLine("   ------------------------------");
                            writer.WriteLine("   computing for N = " + N);
                            for (int e = 0; e < epsilons.Length; e++)
                            {
                                double epsilon = epsilons[e];
                                writer.WriteLine("      ------------------------------");
                                writer.WriteLine("      computing for e = " + epsilon);
                                for (int d = 0; d < deltas.Length; d++)
                                {
                                    double delta = deltas[d];
                                    for (int knownCounter = 0; knownCounter < 2; knownCounter++)
                                    {
                                        Boolean known_N;
                                        if (knownCounter == 0) known_N = true;
                                        else known_N = false;

                                        IDoubleQuantileFinder finder = QuantileFinderFactory.NewDoubleQuantileFinder(known_N, N, epsilon, delta, p, null);
                                        //Console.WriteLine(finder.this.GetType().Name);
                                        /*
                                        double[] returnSamplingRate = new double[1];
                                        long[] result;
                                        if (known_N) {
                                            result = QuantileFinderFactory.known_N_compute_B_and_K(N, epsilon, delta, p, returnSamplingRate);
                                        }
                                        else {
                                            result = QuantileFinderFactory.unknown_N_compute_B_and_K(epsilon, delta, p);
                                            long b1 = result[0];
                                            long k1 = result[1];

                                            if (N>=0) {
                                                long[] resultKnown = QuantileFinderFactory.known_N_compute_B_and_K(N, epsilon, delta, p, returnSamplingRate);
                                                long b2 = resultKnown[0];
                                                long k2 = resultKnown[1];

                                                if (b2 * k2 < b1 * k1) { // the KnownFinder is smaller
                                                    result = resultKnown;
                                                }
                                            }
                                        }


                                        long b = result[0];
                                        long k = result[1];
                                        */
                                        String knownStr = known_N ? "  known" : "unknown";
                                        long mem = finder.TotalMemory();
                                        if (mem == 0) mem = N;
                                        //else if (mem==0 && !known_N && N<0) mem = long.MaxValue; // actually infinity
                                        //else if (mem==0 && !known_N && N>=0) mem = N;
                                        //Console.Write("         (e,d,N,p)=("+epsilon+","+delta+","+N+","+p+") --> ");
                                        writer.Write("         (known, d)=(" + knownStr + ", " + delta + ") --> ");
                                        //Console.Write("(mem,b,k,memF");
                                        writer.Write("(MB,mem");
                                        //if (known_N) Console.Write(",sampling");
                                        //Console.Write(")=("+(System.Math.Round(b*k/1000.0))+","+b+","+k+", "+System.Math.Round(b*k*8/1024.0/1024.0));
                                        //Console.Write(")=("+b*k/1000.0+","+b+","+k+", "+b*k*8/1024.0/1024.0+", "+System.Math.Round(b*k*8/1024.0/1024.0));
                                        writer.Write(")=(" + mem * 8.0 / 1024.0 / 1024.0 + ",  " + mem / 1000.0 + ",  " + System.Math.Round(mem * 8.0 / 1024.0 / 1024.0));
                                        //if (known_N) Console.Write(","+returnSamplingRate[0]);
                                        writer.WriteLine(")");
                                    }
                                }
                            }
                        }
                    }
                    timer.Stop();
                }
            }
            catch (IOException x)
            {
                using (StreamWriter writer = new StreamWriter(filename))
                {
                    writer.Write(x.StackTrace);
                }
            }
        }