public void GatherRefinementProgress(string[] folders)
{
foreach (var species in Species)
{
string SpeciesID = species.GUID.ToString().Substring(0, 8);
Projector Rec1 = species.HalfMap1Reconstruction[0];
Projector Rec2 = species.HalfMap2Reconstruction[0];
Particle[] OriginalParticles = species.Particles.ToList().ToArray();
Particle[] FinalParticles = species.Particles;
foreach (var folder in folders)
{
foreach (var path in Directory.EnumerateFiles(folder, $"{SpeciesID}_half1_*.mrc"))
{
Projector Saved = Projector.FromFile(path);
Rec1.Data.Add(Saved.Data);
Rec1.Weights.Add(Saved.Weights);
Saved.Dispose();
}
foreach (var path in Directory.EnumerateFiles(folder, $"{SpeciesID}_half2_*.mrc"))
{
Projector Saved = Projector.FromFile(path);
Rec2.Data.Add(Saved.Data);
Rec2.Weights.Add(Saved.Weights);
Saved.Dispose();
}
Particle[] UpdatedParticles = species.ParticlesFromStar(new Star(System.IO.Path.Combine(folder, $"{SpeciesID}_particles.star")));
for (int p = 0; p < OriginalParticles.Length; p++)
{
if (OriginalParticles[p].Coordinates.Where((v, i) => v != UpdatedParticles[p].Coordinates[i]).Count() > 0 ||
OriginalParticles[p].Angles.Where((v, i) => v != UpdatedParticles[p].Angles[i]).Count() > 0)
{
FinalParticles[p] = UpdatedParticles[p];
}
}
}
Rec1.FreeDevice();
Rec2.FreeDevice();
}
}
