public void LoadFromFile(string fileName)
{
if (!File.Exists(fileName))
{
throw new FileNotFoundException("Parameter file not found", fileName);
}
XElement docRoot = XElement.Load(fileName);
ApplicationTitle = docRoot.Element("Version").Value;
MergeResult = Convert.ToBoolean(docRoot.Element("MergeResult").Value);
ConflictType = ResolveSearchEngineConflictTypeFactory.Find(docRoot.GetChildValue("ConflictType", ResolveSearchEngineConflictTypeFactory.DiscardAll.Name));
if (docRoot.Element("MinimumEngineAgreeCount") != null)
{
MinimumEngineAgreeCount = int.Parse(docRoot.Element("MinimumEngineAgreeCount").Value);
}
if (docRoot.Element("MergeResultFromSameEngineButDifferentSearchParameters") != null)
{
KeepTopPeptideFromSameEngineButDifferentSearchParameters = bool.Parse(docRoot.Element("MergeResultFromSameEngineButDifferentSearchParameters").Value);
}
if (docRoot.Element("PeptideRetrieval") != null)
{
PeptideRetrieval = bool.Parse(docRoot.Element("PeptideRetrieval").Value);
}
Database.Load(docRoot);
FalseDiscoveryRate.Load(docRoot);
Classification.Load(docRoot);
PeptideFilter.Load(docRoot);
try
{
DatasetList.Load(docRoot);
DatasetList.ForEach(m => m.Parent = this);
}
catch (Exception ex)
{
MessageBox.Show("Load dataset error :" + ex.Message);
}
}
public XElement ToXml()
{
XElement docRoot = new XElement("BuildSummaryOption",
new XElement("Version", ApplicationTitle),
new XElement("MergeResult", MergeResult),
new XElement("ConflictType", ConflictType),
new XElement("MinimumEngineAgreeCount", MinimumEngineAgreeCount),
new XElement("MergeResultFromSameEngineButDifferentSearchParameters", KeepTopPeptideFromSameEngineButDifferentSearchParameters),
new XElement("PeptideRetrieval", PeptideRetrieval));
Database.Save(docRoot);
FalseDiscoveryRate.Save(docRoot);
Classification.Save(docRoot);
PeptideFilter.Save(docRoot);
DatasetList.Save(docRoot);
return(docRoot);
}
