public static Resource GetRequest(string id, NameValueCollection queryParam)
{
Resource fhirResource = null;
try
{
string identifier = GetIdentifier(id, queryParam);
if (string.IsNullOrEmpty(identifier))
{
fhirResource = GetAllOperationDefinitions(queryParam);
}
else
{
fhirResource = GetOperationDefinition(identifier, queryParam);
}
}
catch (Exception ex)
{
if (ex.Message == MISSING_OPDEF_IDENTIFIER)
{
return(OperationOutcome.ForMessage("No Operation Definition id or identifer in Request", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == UNFOUND_OPDEF_IDENTIFIER)
{
return(OperationOutcome.ForMessage("Operation Definition not found", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else
{
return(OperationOutcome.ForMessage(ex.Message, OperationOutcome.IssueType.Unknown, OperationOutcome.IssueSeverity.Error));
}
}
return(fhirResource);
}
private static Resource GetRequest(string identifier, NameValueCollection queryParam)
{
if (string.IsNullOrEmpty(identifier))
{
return(OperationOutcome.ForMessage("No NamingSystem id or identifer in Request", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
NamingSystem namingSystem = new NamingSystem();
string resourceFilePath = Path.GetDirectoryName(new Uri(Assembly.GetExecutingAssembly().CodeBase).LocalPath) + @"\Test Files\";
FhirXmlParser fxp = new FhirXmlParser();
if (identifier.ToUpper() == "NHI" || identifier == DIGITAL_HEALTH_NZ + "/id/nhi" || identifier == "2.16.840.1.113883.2.18.2")
{
namingSystem = fxp.Parse <NamingSystem>(File.ReadAllText(resourceFilePath + "NamingSystem_NHI.xml"));
}
else if (identifier.ToUpper() == "HPI-CPN" || identifier == DIGITAL_HEALTH_NZ + "/id/hpi-person" || identifier == "2.16.840.1.113883.2.18.3.1")
{
namingSystem = fxp.Parse <NamingSystem>(File.ReadAllText(resourceFilePath + "NamingSystem_HPI_CPN.xml"));
}
else if (identifier.ToUpper() == "HPI-FAC" || identifier == DIGITAL_HEALTH_NZ + "/id/hpi-facility" || identifier == "2.16.840.1.113883.2.18.3.2")
{
namingSystem = fxp.Parse <NamingSystem>(File.ReadAllText(resourceFilePath + "NamingSystem_HPI_FAC.xml"));
}
else if (identifier.ToUpper() == "HPI-ORG" || identifier == DIGITAL_HEALTH_NZ + "/id/hpi-organisation" || identifier == "2.16.840.1.113883.2.18.3.3")
{
namingSystem = fxp.Parse <NamingSystem>(File.ReadAllText(resourceFilePath + "NamingSystem_HPI_ORG.xml"));
}
else if (identifier.ToUpper() == "NZMT" || identifier == NzMt.URI || identifier == "2.16.840.1.113883.2.18.21")
{
namingSystem = fxp.Parse <NamingSystem>(File.ReadAllText(resourceFilePath + "NamingSystem_NZMT.xml"));
}
else if (identifier.ToUpper() == "NZ_ETHNICITY_LEVEL_1" || identifier == NzEthnicityL1.URI || identifier == "2.16.840.1.113883.2.18.11")
{
namingSystem = fxp.Parse <NamingSystem>(File.ReadAllText(resourceFilePath + "NamingSystem_NZ_ETHNICITY_LEVEL_1.xml"));
}
else if (identifier.ToUpper() == "NZ_ETHNICITY_LEVEL_2" || identifier == NzEthnicityL2.URI || identifier == "2.16.840.1.113883.2.18.11.1")
{
namingSystem = fxp.Parse <NamingSystem>(File.ReadAllText(resourceFilePath + "NamingSystem_NZ_ETHNICITY_LEVEL_2.xml"));
}
else if (identifier.ToUpper() == "NZ_ETHNICITY_LEVEL_3" || identifier == NzEthnicityL3.URI || identifier == "2.16.840.1.113883.2.18.11.2")
{
namingSystem = fxp.Parse <NamingSystem>(File.ReadAllText(resourceFilePath + "NamingSystem_NZ_ETHNICITY_LEVEL_3.xml"));
}
else if (identifier.ToUpper() == "NZ_ETHNICITY_LEVEL_4" || identifier == NzEthnicityL4.URI || identifier == "2.16.840.1.113883.2.18.11.5")
{
namingSystem = fxp.Parse <NamingSystem>(File.ReadAllText(resourceFilePath + "NamingSystem_NZ_ETHNICITY_LEVEL_4.xml"));
}
else
{
return(OperationOutcome.ForMessage("Naming System Not Recognised.", OperationOutcome.IssueType.Unknown, OperationOutcome.IssueSeverity.Error));
}
AddNarrative(namingSystem);
return(namingSystem);
}
public static Resource GetRequest(string id, string operation, NameValueCollection queryParam)
{
Resource fhirResource = null;
try
{
string identifier = GetIdentifier(id, queryParam);
// check requested operation
if (string.IsNullOrEmpty(operation))
{
if (string.IsNullOrEmpty(identifier))
{
fhirResource = GetAllNamingSystems(queryParam);
}
else
{
fhirResource = GetRequest(identifier, queryParam);
}
}
else if (operation == "$preferred-id")
{
fhirResource = PreferredIdOperation(id, queryParam);
}
else
{
return(OperationOutcome.ForMessage("Unrecognised Operation in Request..." + operation, OperationOutcome.IssueType.Unknown, OperationOutcome.IssueSeverity.Error));
}
}
catch (Exception ex)
{
if (ex.Message == MISSING_NS_IDENTIFIER)
{
return(OperationOutcome.ForMessage("No Naming System id or identifer in Request", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == MISSING_NS_TYPE)
{
return(OperationOutcome.ForMessage("No Naming System Type in Request", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == UNFOUND_NS_IDENTIFIER)
{
return(OperationOutcome.ForMessage("Naming System Preferred Identifier not found", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else
{
return(OperationOutcome.ForMessage(ex.Message, OperationOutcome.IssueType.Unknown, OperationOutcome.IssueSeverity.Error));
}
}
return(fhirResource);
}
private static Resource GetAllCodeSystems(NameValueCollection queryParam)
{
string contentMode = Utilities.GetQueryValue("content-mode", queryParam);
string supplements = Utilities.GetQueryValue("supplements", queryParam);
if (supplements == "bundle-type" || supplements == "http://hl7.org/fhir/bundle-type")
{
return(GetRequest("bundle-type-german", string.Empty, queryParam));
}
Bundle csBundle = new Bundle();
csBundle.Id = Guid.NewGuid().ToString();
csBundle.Type = Bundle.BundleType.Searchset;
csBundle.Link.Add(new Bundle.LinkComponent {
Url = ServerCapability.TERMINZ_CANONICAL + "/CodeSystem", Relation = "self"
});
if (string.IsNullOrEmpty(contentMode) || contentMode == "not-present")
{
csBundle.AddResourceEntry(GetRequest(string.Empty, FhirSnomed.URI, queryParam), FhirSnomed.URI);
csBundle.AddResourceEntry(GetRequest(string.Empty, FhirLoinc.URI, queryParam), FhirLoinc.URI);
csBundle.AddResourceEntry(GetRequest(string.Empty, NzMt.URI, queryParam), NzMt.URI);
csBundle.AddResourceEntry(GetRequest(string.Empty, FhirRxNorm.URI, queryParam), FhirRxNorm.URI);
}
if (string.IsNullOrEmpty(contentMode) || contentMode == "complete")
{
csBundle.AddResourceEntry(GetRequest("NzEthnicityL1", string.Empty, queryParam), NzEthnicityL1.URI);
csBundle.AddResourceEntry(GetRequest("NzEthnicityL2", string.Empty, queryParam), NzEthnicityL2.URI);
csBundle.AddResourceEntry(GetRequest("NzEthnicityL3", string.Empty, queryParam), NzEthnicityL3.URI);
csBundle.AddResourceEntry(GetRequest("NzEthnicityL4", string.Empty, queryParam), NzEthnicityL4.URI);
csBundle.AddResourceEntry(GetRequest("NzRegion", string.Empty, queryParam), NzRegion.URI);
csBundle.AddResourceEntry(GetRequest("bundle-type", string.Empty, queryParam), "http://hl7.org/fhir/bundle-type");
}
if (string.IsNullOrEmpty(contentMode) || contentMode == "supplement")
{
csBundle.AddResourceEntry(GetRequest("bundle-type-german", string.Empty, queryParam), "http://hl7.org/fhir/bundle-type-de");
}
csBundle.Total = csBundle.Entry.Count();
if (csBundle.Total == 0)
{
return(OperationOutcome.ForMessage("No Code Systems match search parameter values.", OperationOutcome.IssueType.NotFound, OperationOutcome.IssueSeverity.Information));
}
return(csBundle);
}
public async Task GivenPatients_WhenSearchedWithInvalidSearchAndSortParamsAndHandlingStrict_ThenErrorReturnedWithMessage()
{
var tag = Guid.NewGuid().ToString();
var patients = await CreatePatients(tag);
OperationOutcome expectedOperationOutcome = OperationOutcome.ForMessage(
string.Format(CultureInfo.InvariantCulture, Core.Resources.SortParameterValueIsNotValidSearchParameter, _unsupportedSearchAndSortParam, "Patient"),
OperationOutcome.IssueType.Invalid,
OperationOutcome.IssueSeverity.Error);
await ExecuteAndValidateErrorOperationOutcomeAsync(
$"Patient?_tag={tag}&_sort={_unsupportedSearchAndSortParam}",
new Tuple <string, string>("Prefer", "handling=strict"),
HttpStatusCode.BadRequest,
expectedOperationOutcome);
}
public async Task GivenPatients_WhenSearchedWithInvalidSearchAndSortParamsAndHandlingLenient_ThenPatientsAreReturnedUnsortedWithWarning()
{
var tag = Guid.NewGuid().ToString();
Patient[] patients = await CreatePatients(tag);
Resource[] expectedResources = new Resource[patients.Length + 1];
expectedResources[0] = OperationOutcome.ForMessage(
string.Format(CultureInfo.InvariantCulture, Core.Resources.SortParameterValueIsNotValidSearchParameter, _unsupportedSearchAndSortParam, "Patient"),
OperationOutcome.IssueType.NotSupported,
OperationOutcome.IssueSeverity.Warning);
patients.Cast <Resource>().ToArray().CopyTo(expectedResources, 1);
await ExecuteAndValidateBundle(
$"Patient?_tag={tag}&_sort={_unsupportedSearchAndSortParam}",
true, // Server sort will fail, so sort expected result and actual result before comparing.
true, // Turn on test logic for invalid sort parameter.
new Tuple <string, string>("Prefer", "handling=lenient"),
expectedResources);
}
private static Resource GetAllNamingSystems(NameValueCollection queryParam)
{
string kind = Utilities.GetQueryValue("kind", queryParam);
Bundle nsBundle = new Bundle
{
Id = Guid.NewGuid().ToString(),
Type = Bundle.BundleType.Searchset
};
nsBundle.Link.Add(new Bundle.LinkComponent {
Url = ServerCapability.TERMINZ_CANONICAL + "/NamingSystem", Relation = "self"
});
if (string.IsNullOrEmpty(kind) || kind == "identifier")
{
nsBundle.AddResourceEntry(GetRequest("NHI", queryParam), ServerCapability.TERMINZ_CANONICAL + "/NamingSystem/NHI");
nsBundle.AddResourceEntry(GetRequest("HPI-CPN", queryParam), ServerCapability.TERMINZ_CANONICAL + "/NamingSystem/HPI-CPN");
nsBundle.AddResourceEntry(GetRequest("HPI-FAC", queryParam), ServerCapability.TERMINZ_CANONICAL + "/NamingSystem/HPI-FAC");
nsBundle.AddResourceEntry(GetRequest("HPI-ORG", queryParam), ServerCapability.TERMINZ_CANONICAL + "/NamingSystem/HPI-ORG");
}
if (string.IsNullOrEmpty(kind) || kind == "codesystem")
{
nsBundle.AddResourceEntry(GetRequest("NZMT", queryParam), "/NamingSystem/NZMT");
nsBundle.AddResourceEntry(GetRequest("NZ_ETHNICITY_LEVEL_1", queryParam), ServerCapability.TERMINZ_CANONICAL + "/NamingSystem/NZ_ETHNICITY_LEVEL_1");
nsBundle.AddResourceEntry(GetRequest("NZ_ETHNICITY_LEVEL_2", queryParam), ServerCapability.TERMINZ_CANONICAL + "/NamingSystem/NZ_ETHNICITY_LEVEL_2");
nsBundle.AddResourceEntry(GetRequest("NZ_ETHNICITY_LEVEL_3", queryParam), ServerCapability.TERMINZ_CANONICAL + "/NamingSystem/NZ_ETHNICITY_LEVEL_3");
nsBundle.AddResourceEntry(GetRequest("NZ_ETHNICITY_LEVEL_4", queryParam), ServerCapability.TERMINZ_CANONICAL + "/NamingSystem/NZ_ETHNICITY_LEVEL_4");
}
nsBundle.Total = nsBundle.Entry.Count();
if (nsBundle.Total == 0)
{
return(OperationOutcome.ForMessage("No Naming Systems match search parameter values.", OperationOutcome.IssueType.NotFound, OperationOutcome.IssueSeverity.Information));
}
return(nsBundle);
}
internal static Resource GetFhirResource(string resource, string id, string operation, NameValueCollection queryParams, string fhirVersion)
{
Resource fhirResource = null;
try
{
if (fhirVersion == "r2")
{
fhirResource = OperationOutcome.ForMessage("FHIR r2/DSTU2 not supported by this server", OperationOutcome.IssueType.BusinessRule);
}
else if (fhirVersion == "r3")
{
fhirResource = OperationOutcome.ForMessage("FHIR r3/STU3 not supported by this server", OperationOutcome.IssueType.BusinessRule);
}
else if (string.IsNullOrEmpty(resource) && operation == "$versions")
{
fhirResource = ServerCapability.GetVersions();
}
else if (resource == "metadata")
{
fhirResource = ServerCapability.GetStatement(queryParams);
}
else if (resource == "TerminologyCapabilities")
{
fhirResource = TerminologyCapability.GetStatement(true);
}
else if (resource == "OperationDefinition")
{
fhirResource = ConformanceOperationDefinition.GetRequest(id, queryParams);
}
else if (resource == "CodeSystem")
{
fhirResource = TerminologyCodeSystem.PerformOperation(id, operation, queryParams);
}
else if (resource == "ConceptMap" || operation == "$closure")
{
fhirResource = TerminologyConceptMap.PerformOperation(id, operation, queryParams);
}
else if (resource == "ValueSet")
{
fhirResource = TerminologyValueSet.PerformOperation(id, operation, queryParams);
}
else if (resource == "NamingSystem")
{
fhirResource = TerminologyNamingSystem.GetRequest(id, operation, queryParams);
}
else if (resource == "Location")
{
fhirResource = AdministrationLocation.GetRequest(id, queryParams);
}
else if (resource == "Organization")
{
fhirResource = AdministrationOrganisation.GetRequest(id, queryParams);
}
else
{
fhirResource = OperationOutcome.ForMessage("No module could be found to handle the request '" + resource + "'", OperationOutcome.IssueType.NotFound);
}
}
catch (Exception ex)
{
Log.Write("ERROR: " + ex.ToString(), LogLevel.ExceptionOnly);
throw;
}
return(fhirResource);
}
public Stream TerminzBatch()
{
string rv = string.Empty;
string responseType = GetResponseType();
string fhirVersion = GetFhirVersion();
// get Bundle from the Request Stream
string reqBody = string.Empty;
UTF8Encoding enc = new UTF8Encoding();
Stream reqStream = OperationContext.Current.RequestContext.RequestMessage.GetBody <Stream>();
using (StreamReader reader = new StreamReader(reqStream, enc))
{
reqBody = reader.ReadToEnd();
}
string reqType = WebOperationContext.Current.IncomingRequest.ContentType.ToLower();
Resource fhirResource;
if (reqType.Contains("json"))
{
FhirJsonParser fjp = new FhirJsonParser();
fhirResource = fjp.Parse <Resource>(reqBody);
}
else
{
FhirXmlParser fxp = new FhirXmlParser();
fhirResource = fxp.Parse <Resource>(reqBody);
}
if (fhirResource.ResourceType == ResourceType.Bundle)
{
Bundle fb = (Bundle)fhirResource;
if (fb.Type == Bundle.BundleType.Batch)
{
Bundle responseBundle = new Bundle();
responseBundle.Id = Guid.NewGuid().ToString();
responseBundle.Type = Bundle.BundleType.BatchResponse;
foreach (Bundle.EntryComponent comp in fb.Entry)
{
Bundle.RequestComponent rc = comp.Request;
if (rc.Method == Bundle.HTTPVerb.GET)
{
if (rc.Url.IndexOf("$validate-code") > 0)
{
// extract and parse query string to get parameters
int qsPos = rc.Url.IndexOf('?');
string querystring = (qsPos < rc.Url.Length - 1) ? rc.Url.Substring(qsPos + 1) : String.Empty;
qParam = System.Web.HttpUtility.ParseQueryString(querystring);
// extract resource (CodeSystem or ValueSet) ID
string resourceID = string.Empty;
string resourceName = resourceID.IndexOf("/ValueSet/") > 0 ? "ValueSet" : "CodeSystem";
try
{
resourceID = rc.Url.Remove(qsPos);
int resNamePos = resourceID.IndexOf("/" + resourceName + "/");
resourceID = resourceID.Substring(resNamePos + 9).Replace("/", "").Replace("$validate-code", "");
}
catch { }
ServiceInterface appSi = new ServiceInterface();
responseBundle.AddResourceEntry(appSi.GetFhirResource(resourceName, resourceID, "$validate-code", qParam, fhirVersion), string.Empty);
}
else
{
responseBundle.AddResourceEntry(OperationOutcome.ForMessage("Unrecognised Operation in Request..." + rc.Url, OperationOutcome.IssueType.Unknown), string.Empty);
}
}
else if (rc.Method == Bundle.HTTPVerb.POST)
{
if (rc.Url.IndexOf("$translate") > 0 && comp.Resource.ResourceType == ResourceType.Parameters)
{
// extract ConceptMap ID
string cmID = string.Empty;
try
{
cmID = rc.Url.Replace("ConceptMap/", "").Replace("$translate", "").Replace("/", "");
}
catch { }
// get parameters
Parameters fParam = (Parameters)comp.Resource;
SetQueryParameters(fParam);
ServiceInterface appSi = new ServiceInterface();
responseBundle.AddResourceEntry(appSi.GetFhirResource("ConceptMap", cmID, "$translate", qParam, fhirVersion), string.Empty);
}
else
{
responseBundle.AddResourceEntry(OperationOutcome.ForMessage("Unrecognised Operation in Request..." + rc.Url, OperationOutcome.IssueType.Unknown), string.Empty);
}
}
else
{
responseBundle.AddResourceEntry(OperationOutcome.ForMessage("Method Not Supported in Batch Mode '" + rc.Method.ToString() + "'", OperationOutcome.IssueType.NotSupported), string.Empty);
}
}
fhirResource = responseBundle;
}
else
{
fhirResource = OperationOutcome.ForMessage("No module could be found to handle the bundle type '" + fb.TypeName + "'", OperationOutcome.IssueType.NotFound);
}
}
else
{
fhirResource = OperationOutcome.ForMessage("No module could be found to handle the request '" + fhirResource.ResourceType.ToString() + "'", OperationOutcome.IssueType.NotFound);
}
if (fhirResource.ResourceType == ResourceType.OperationOutcome)
{
AddNarrativeToOperationOutcome(fhirResource);
OutgoingWebResponseContext response = WebOperationContext.Current.OutgoingResponse;
response.StatusCode = HttpStatusCode.BadRequest;
// if wish for more granular response codes, need Issue Type
//OperationOutcome oo = (OperationOutcome)fhirResource;
//OperationOutcome.IssueType opOutcome = (OperationOutcome.IssueType)oo.Issue[0].Code;
}
// convert to stream to remove leading XML elements and json quotes
rv = SerializeResponse(fhirResource, responseType, SummaryType.False);
return(new System.IO.MemoryStream(UTF8Encoding.Default.GetBytes(rv)));
}
// entry method - handles all exceptions (converts to outcome operations)
public static Resource PerformOperation(string id, string operation, NameValueCollection queryParam)
{
Resource fhirResource = null;
try
{
string identifier = GetIdentifier(id, queryParam);
string systemURL = GetSystem(queryParam);
// check requested operation
if (string.IsNullOrEmpty(operation))
{
if (string.IsNullOrEmpty(identifier) && string.IsNullOrEmpty(systemURL))
{
fhirResource = GetAllCodeSystems(queryParam);
}
else
{
fhirResource = GetRequest(identifier, systemURL, queryParam);
}
}
else if (operation == "$lookup")
{
fhirResource = LookupOperation(systemURL, queryParam);
}
else if (operation == "$validate-code")
{
fhirResource = ValidateCodeOperation(systemURL, queryParam);
}
else if (operation == "$subsumes")
{
fhirResource = SubsumesOperation(systemURL, queryParam);
}
else if (operation == "$find-matches")
{
//throw new Exception(FIND_MATCHES_UNSUPPORTED);
fhirResource = FindMatchesOperation(systemURL, queryParam);
}
else
{
return(OperationOutcome.ForMessage("Unrecognised Operation in Request..." + operation, OperationOutcome.IssueType.Unknown, OperationOutcome.IssueSeverity.Error));
}
}
catch (Exception ex)
{
if (ex.Message == MISSING_CODE_CODING)
{
return(OperationOutcome.ForMessage("No code or coding value in Request", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == MISSING_CODESYSTEM)
{
return(OperationOutcome.ForMessage("No system to define code in Request", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == INVALID_CODE)
{
return(OperationOutcome.ForMessage("Invalid Code.", OperationOutcome.IssueType.CodeInvalid, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == UNSUPPORTED_CODESYSTEM)
{
return(OperationOutcome.ForMessage("Code System not supported.", OperationOutcome.IssueType.NotSupported, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == SUBSUMPTION_UNSUPPORTED)
{
return(OperationOutcome.ForMessage("Subsumption not supported for specified Code System.", OperationOutcome.IssueType.NotSupported, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == FIND_MATCHES_UNSUPPORTED)
{
return(OperationOutcome.ForMessage("find-matches operation not supported for specified Code System.", OperationOutcome.IssueType.NotSupported, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == MISSING_ATTRIBUTE)
{
return(OperationOutcome.ForMessage("Must submit at least one Attribute/Value Pair Property.", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == UNSUPPORTED_EXACT_SETTING)
{
return(OperationOutcome.ForMessage("Exact Property value not supported.", OperationOutcome.IssueType.NotSupported, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == UNSUPPORTED_DISPLAY_LANGUAGE)
{
return(OperationOutcome.ForMessage("Display Language requested is not supported (please omit or request en-NZ).", OperationOutcome.IssueType.NotSupported, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == MISSING_EXACT)
{
return(OperationOutcome.ForMessage("Missing Exact Property.", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == MISSING_FOCUS_CONCEPT)
{
return(OperationOutcome.ForMessage("Missing Focus Concept.", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == NO_EXACT_MATCH)
{
return(OperationOutcome.ForMessage("No Exact Matches.", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == FhirLoinc.UNSUPPORTED_ANSWER_LIST)
{
return(OperationOutcome.ForMessage("LOINC Answer List IDs refer to Value Sets.", OperationOutcome.IssueType.NotSupported, OperationOutcome.IssueSeverity.Error));
}
throw;
}
return(fhirResource);
}
public static Resource GetRequest(string id, NameValueCollection queryParam)
{
Bundle locBundle = new Bundle
{
Id = Guid.NewGuid().ToString(),
Type = Bundle.BundleType.Searchset
};
locBundle.Link.Add(new Bundle.LinkComponent {
Url = ServerCapability.TERMINZ_CANONICAL + "/Location", Relation = "self"
});
Location location = new Location();
Organization org = new Organization();
string identifier = GetIdentifier(id, queryParam);
string address = Utilities.GetQueryValue("address", queryParam);
string address_city = Utilities.GetQueryValue("address-city", queryParam);
string address_postalcode = Utilities.GetQueryValue("address-postalcode", queryParam);
string name = Utilities.GetQueryValue("name", queryParam);
string type = Utilities.GetQueryValue("type", queryParam);
bool idPassed = !string.IsNullOrEmpty(id);
int matches = 0;
// facilitate (more efficient) postcode and city filtering at DB layer
if (!string.IsNullOrEmpty(address_postalcode) && string.IsNullOrEmpty(address))
{
address = address_postalcode;
}
if (!string.IsNullOrEmpty(address_city) && string.IsNullOrEmpty(address))
{
address = address_city;
}
if (string.IsNullOrEmpty(identifier) && string.IsNullOrEmpty(name) && string.IsNullOrEmpty(address) && string.IsNullOrEmpty(type))
{
return(OperationOutcome.ForMessage("No valid search parameters.", OperationOutcome.IssueType.Invalid, OperationOutcome.IssueSeverity.Error));
}
//CodeableConcept hpiFac = new CodeableConcept { Text = "HPI-FAC" };
try
{
List <HpiFacility> facilities = SnomedCtSearch.GetLocations(identifier, name, address, type);
foreach (HpiFacility fac in facilities)
{
bool addLocation = true;
Address locAddress = Utilities.GetAddress(fac.FacilityAddress.Trim());
if (!string.IsNullOrEmpty(address_city) && locAddress.City.ToUpper() != address_city.ToUpper())
{
addLocation = false;
}
if (!string.IsNullOrEmpty(address_postalcode) && locAddress.PostalCode.ToUpper() != address_postalcode.ToUpper())
{
addLocation = false;
}
if (addLocation)
{
bool addOrg = false;
org = new Organization();
location = new Location
{
Id = fac.FacilityId.Trim()
};
location.Identifier.Add(new Identifier {
Value = fac.FacilityId.Trim(), System = NAMING_SYSTEM_IDENTIFIER
});
location.Name = fac.FacilityName.Trim();
location.Status = Location.LocationStatus.Active;
location.Mode = Location.LocationMode.Instance;
location.Type.Add(new CodeableConcept {
Text = fac.FacilityTypeName.Trim()
});
location.Address = locAddress;
AddNarrative(location);
if (!string.IsNullOrEmpty(fac.OrganisationId))
{
try
{
org = (Organization)AdministrationOrganisation.GetRequest(fac.OrganisationId, null);
location.ManagingOrganization = new ResourceReference {
Reference = fac.OrganisationId
};
addOrg = true;
}
catch { }
}
locBundle.AddResourceEntry(location, ServerCapability.TERMINZ_CANONICAL + "/Location/" + fac.FacilityId.Trim());
matches++;
if (addOrg)
{
locBundle.AddResourceEntry(org, ServerCapability.TERMINZ_CANONICAL + "/Organization" + "/" + fac.OrganisationId.Trim());
}
}
}
if (matches == 0)
{
return(OperationOutcome.ForMessage("No Locations match search parameter values.", OperationOutcome.IssueType.NotFound, OperationOutcome.IssueSeverity.Information));
}
locBundle.Total = matches;
}
catch (Exception ex)
{
return(OperationOutcome.ForMessage("Error: " + ex.Message, OperationOutcome.IssueType.Invalid, OperationOutcome.IssueSeverity.Error));
}
// always return bundle because of contained resources <TODO> implement _include so user can specify this
return(locBundle);
}
public static Resource PerformOperation(string id, string operation, NameValueCollection queryParam)
{
Resource fhirResource = null;
try
{
string identifier = GetIdentifier(id, queryParam);
// check requested operation
if (string.IsNullOrEmpty(operation))
{
if (string.IsNullOrEmpty(identifier))
{
fhirResource = GetConceptMaps(identifier, queryParam);
}
else
{
fhirResource = GetRequest(identifier, queryParam);
}
}
else if (operation == "$translate")
{
fhirResource = TranslateOperation(id, queryParam);
}
else if (operation == "$closure")
{
//return OperationOutcome.ForMessage("Closure operation not yet supported.", OperationOutcome.IssueType.NotSupported);
fhirResource = ClosureOperation(queryParam);
}
else
{
return(OperationOutcome.ForMessage("Unrecognised Operation in Request..." + operation, OperationOutcome.IssueType.Unknown, OperationOutcome.IssueSeverity.Error));
}
}
catch (Exception ex)
{
if (ex.Message == INVALID_CLOSURE_NAME)
{
return(OperationOutcome.ForMessage("Invalid Closure Name", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == INVALID_CLOSURE_PARAMS)
{
return(OperationOutcome.ForMessage("Invalid Closure Parameters - cannot pass both concepts and a version", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == MISSING_CLOSURE_NAME)
{
return(OperationOutcome.ForMessage("No Closure Name in Request", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == REINITIALISE_CLOSURE)
{
return(OperationOutcome.ForMessage("Closure must be reinitialised", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == MISSING_CONCEPTMAP_IDENTIFIER)
{
return(OperationOutcome.ForMessage("No ConceptMap id or identifer in Request", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == MISSING_SOURCE_CODE_CODING)
{
return(OperationOutcome.ForMessage("No source code for mapping in Request", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == MISSING_SOURCE_SYSTEM)
{
return(OperationOutcome.ForMessage("No source system for code in mapping in Request", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == MISSING_TARGET_SYSTEM)
{
return(OperationOutcome.ForMessage("No target system for mapping in Request", OperationOutcome.IssueType.BusinessRule, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == UNRECOGNISED_CONCEPTMAP)
{
return(OperationOutcome.ForMessage("Concept Map Not Recognised.", OperationOutcome.IssueType.Unknown, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == UNSUPPORTED_VERSION)
{
return(OperationOutcome.ForMessage("Concept Map Version Not Supported.", OperationOutcome.IssueType.NotSupported, OperationOutcome.IssueSeverity.Error));
}
else if (ex.Message == UNSUPPORTED_CODE_SYSTEM)
{
return(OperationOutcome.ForMessage("Code System Not Supported.", OperationOutcome.IssueType.NotSupported, OperationOutcome.IssueSeverity.Error));
}
else
{
return(OperationOutcome.ForMessage(ex.Message, OperationOutcome.IssueType.Unknown, OperationOutcome.IssueSeverity.Error));
}
throw;
}
return(fhirResource);
}
public static Resource GetRequest(string id, NameValueCollection queryParam)
{
Bundle orgBundle = new Bundle
{
Id = Guid.NewGuid().ToString(),
Type = Bundle.BundleType.Searchset
};
orgBundle.Link.Add(new Bundle.LinkComponent {
Url = ServerCapability.TERMINZ_CANONICAL + "/Organization", Relation = "self"
});
Organization organization = new Organization();
string identifier = GetIdentifier(id, queryParam);
string address = Utilities.GetQueryValue("address", queryParam);
string address_city = Utilities.GetQueryValue("address-city", queryParam);
string address_postalcode = Utilities.GetQueryValue("address-postalcode", queryParam);
string name = Utilities.GetQueryValue("name", queryParam);
string type = Utilities.GetQueryValue("type", queryParam);
bool idPassed = !string.IsNullOrEmpty(id);
int matches = 0;
// facilitate (more efficient) postcode and city filtering at DB layer
if (!string.IsNullOrEmpty(address_postalcode) && string.IsNullOrEmpty(address))
{
address = address_postalcode;
}
if (!string.IsNullOrEmpty(address_city) && string.IsNullOrEmpty(address))
{
address = address_city;
}
if (string.IsNullOrEmpty(identifier) && string.IsNullOrEmpty(name) && string.IsNullOrEmpty(address) && string.IsNullOrEmpty(type))
{
return(OperationOutcome.ForMessage("No valid search parameters.", OperationOutcome.IssueType.Invalid, OperationOutcome.IssueSeverity.Error));
}
//CodeableConcept hpiFac = new CodeableConcept { Text = "HPI-ORG" };
List <HpiOrganisation> organisations = SnomedCtSearch.GetOrganisations(identifier, name, address, type);
foreach (HpiOrganisation org in organisations)
{
bool addOrg = true;
Address orgAddress = Utilities.GetAddress(org.OrganisationAddress.Trim());
if (!string.IsNullOrEmpty(address_city) && orgAddress.City.ToUpper() != address_city.ToUpper())
{
addOrg = false;
}
if (!string.IsNullOrEmpty(address_postalcode) && orgAddress.PostalCode.ToUpper() != address_postalcode.ToUpper())
{
addOrg = false;
}
if (addOrg)
{
organization = new Organization
{
Id = org.OrganisationId.Trim()
};
organization.Identifier.Add(new Identifier {
Value = org.OrganisationId.Trim(), System = NAMING_SYSTEM_IDENTIFIER
});
organization.Name = org.OrganisationName.Trim();
organization.Active = true;
organization.Type.Add(new CodeableConcept {
Text = org.OrganisationTypeName.Trim()
});
organization.Address.Add(orgAddress);
AddNarrative(organization);
orgBundle.AddResourceEntry(organization, ServerCapability.TERMINZ_CANONICAL + "/Organization/ " + org.OrganisationId.Trim());
matches++;
}
}
if (matches == 0)
{
return(OperationOutcome.ForMessage("No Organisations match search parameter values.", OperationOutcome.IssueType.NotFound, OperationOutcome.IssueSeverity.Information));
}
else if (matches == 1 && idPassed)
{
return(organization);
}
orgBundle.Total = matches;
return(orgBundle);
}
