public Measurement(MeasurementTuple newMT, AssaySelector.MeasurementOption at, NCCReporter.LMLoggers.LognLM logger)
{
mt = newMT;
this.logger = logger;
mid = new MeasId(at);
InitMisc();
}
/// <summary>
/// Constructs a new Measurement object with default values
/// </summary>
/// <param name="at">The measurement method or goal</param>
/// <param name="logger">the logger handle</param>
public Measurement(AssaySelector.MeasurementOption at, LMLoggers.LognLM logger)
{
mt = new MeasurementTuple();
this.logger = logger;
mid = new MeasId(at);
InitMisc();
}
public Measurement(AssaySelector.MeasurementOption at)
{
mt = new MeasurementTuple();
this.logger = null;
mid = new MeasId(at);
InitMisc();
}
/// <summary>
/// Imprint a new measurement with as much information as possible from a results_rec.
/// Might need to bring the Item Id into the test soon.
/// </summary>
/// <param name="rec">The results_rec with the measurement details</param>
/// <param name="meaId">Unique id for the measurement, from the results_rec fields</param>
/// <param name="logger">logger handle</param>
/// <returns>A new measurement</returns>
public Measurement(INCCResults.results_rec rec, MeasId meaId, NCCReporter.LMLoggers.LognLM logger)
{
HVCalibrationParameters hv = NCC.IntegrationHelpers.GetCurrentHVCalibrationParams(rec.det);
MeasurementTuple mt = new MeasurementTuple(new DetectorList(rec.det), rec.tests, rec.norm, rec.bkg, rec.iso, rec.acq, hv);
this.mt = mt;
this.logger = logger;
mid = meaId;
InitMisc();
}
private void OKBtn_Click(object sender, EventArgs e)
{
ListViewItem lvi = null;
if (listView1.SelectedItems.Count > 0)
{
lvi = listView1.SelectedItems[0];
measurementId = (MeasId)lvi.Tag;
this.DialogResult = DialogResult.OK;
}
else
this.DialogResult = DialogResult.Ignore;
this.Close();
}
private void OKBtn_Click(object sender, EventArgs e)
{
ListViewItem lvi = null;
if (listView1.SelectedItems.Count > 0)
{
lvi = listView1.SelectedItems[0];
measurementId = ((Measurement)lvi.Tag).MeasurementId;
DialogResult = DialogResult.OK;
}
else
{
DialogResult = DialogResult.Ignore;
}
Close();
}
private void OKBtn_Click(object sender, EventArgs e)
{
bool notify = true;
NCCReporter.LMLoggers.LognLM ctrllog = N.App.Loggers.Logger(NCCReporter.LMLoggers.AppSection.Control);
foreach (ListViewItem lvi in MeasurementView.Items)
{
if (lvi.Selected)
{
int lvIndex = 0;
if (!int.TryParse(lvi.SubItems[5].Text, out lvIndex)) // 5 has the original mlist index of this sorted row element
{
continue;
}
MeasId mid = mlist[lvIndex].MeasurementId;
ctrllog.TraceEvent(NCCReporter.LogLevels.Info, 22222,
"Deleting " + mid.MeasOption.PrintName() + " " + mid.MeasDateTime.ToString("yy.MM.dd HH:mm:ss") + ", #" + mid.UniqueId + " for " + det.Id.DetectorId);
N.App.DB.DeleteMeasurement(mlist[lvIndex].MeasurementId);
notify = false;
}
}
LoadList(notify);
}
/// <summary>
/// Process one or more .NCC Review measurement data files, with related .NOP/.COP files.
/// Presence of NOP/COP files is optional
/// See Import Operator Declarations from Operator Review and Measurements from Radiation Review p. 24,
/// See Operator Declaration File Format p. 87,
/// See Operator Declaration File Format for Curium Ratio Measurements p. 88,
/// See Radiation Review Measurement Data File Format p. 93, INCC Software Users Manual, March 29, 2009
/// </summary>
void INCCReviewFileProcessing()
{
FireEvent(EventType.ActionPrep, this);
NC.App.Opstate.StampOperationStartTime();
// This code would be the same for an interactive version of this operation
// > Start here
// first find and process and .NOP files
List <string> exts = new List <string>()
{
".nop", ".cop"
};
FileList <CSVFile> hdlr = new FileList <CSVFile>();
hdlr.Init(exts, ctrllog);
FileList <CSVFile> files = null;
OPFiles opfiles = new OPFiles();
// The INCC5 semantics
if (NC.App.AppContext.FileInputList == null)
{
files = (FileList <CSVFile>)hdlr.BuildFileList(NC.App.AppContext.FileInput, NC.App.AppContext.Recurse, true);
}
else
{
files = (FileList <CSVFile>)hdlr.BuildFileList(NC.App.AppContext.FileInputList);
}
if (files != null && files.Count > 0)
{
// construct lists of isotopics and items from the NOP and COP files
opfiles.Process(files);
ctrllog.TraceEvent(LogLevels.Verbose, 33085, "NOP items " + opfiles.Results.ItemIds.Count);
//ctrllog.TraceEvent(LogLevels.Verbose, 33085, "COP entries " + opfiles.Results.COPRatioRecs.Count);
}
else
{
ctrllog.TraceEvent(LogLevels.Warning, 33085, "No operator declarations available, continuing with default values");
}
// process the NCC files only
INCCFileOrFolderInfo foo = new INCCFileOrFolderInfo(ctrllog, "*.NCC");
if (NC.App.AppContext.FileInputList == null)
{
foo.SetPath(NC.App.AppContext.FileInput);
}
else
{
foo.SetFileList(NC.App.AppContext.FileInputList);
}
foo.eh += new TransferEventHandler((s, e) => { FireEvent(EventType.ActionInProgress, e); });
List <INCCTransferBase> res = foo.Restore();
// use RemoveAll to cull those NCC files that reference a non-existent detector
DetectorList dl = NC.App.DB.Detectors;
foreach (INCCReviewFile rf in res)
{
List <Detector> tdk = dl.FindAll(d => 0 == string.Compare(d.Id.DetectorName, rf.detector, true));
if (tdk.Count < 1)
{
rf.skip = true;
ctrllog.TraceEvent(LogLevels.Warning, 33085, "No detector " + rf.detector + " defined, cannot complete processing NCC review file " + System.IO.Path.GetFileName(rf.Path));
}
}
res.RemoveAll(rf => (rf as INCCReviewFile).skip);
res.Sort((rf1, rf2) => // sort chronologically
{
return(DateTime.Compare((rf1 as INCCReviewFile).dt, (rf2 as INCCReviewFile).dt));
});
/// end here > The sorted, filtered and processed list here would be returned to the UI for display and interactive selection
if (res == null || res.Count < 1)
{
NC.App.Opstate.StopTimer();
NC.App.Opstate.StampOperationStopTime();
FireEvent(EventType.ActionStop, this);
ctrllog.TraceEvent(LogLevels.Warning, 33085, "No usable NCC review files found in " + System.IO.Path.GetFullPath(foo.GetPath()));
return;
}
AcquireParameters orig_acq = new AcquireParameters(NC.App.Opstate.Measurement.AcquireState);
// Each NCC file is a separate measurement
foreach (INCCReviewFile irf in res)
{
ResetMeasurement();
if (NC.App.Opstate.IsQuitRequested)
{
break;
}
// Find the detector named in the NCC file (existence shown in earlier processing above)
Detector curdet = NC.App.DB.Detectors.Find(d => string.Compare(d.Id.DetectorName, irf.detector, true) == 0);
if (curdet.AB.Unset)
{
ABKey abkey = new ABKey(curdet.MultiplicityParams, 512); // NEXT: maxbins is arbitrary, just the first of many for VSR
LMRawAnalysis.SDTMultiplicityCalculator.SetAlphaBeta(abkey, curdet.AB);
}
// set up acquire state based on the NCC file content
AcquireParameters newacq = ConfigureAcquireState(curdet, orig_acq, irf);
AssaySelector.MeasurementOption mo = NCCMeasOption(irf);
// make a temp MeasId
MeasId thisone = new MeasId(mo, newacq.MeasDateTime);
// get the list of measurement Ids for this detector
List <MeasId> list = NC.App.DB.MeasurementIds(curdet.Id.DetectorName, mo.PrintName());
MeasId already = list.Find(mid => mid.Equals(thisone));
if (already != null)
{
// URGENT: do the replacement as it says
ctrllog.TraceEvent(LogLevels.Warning, 33085, "Replacing the matching {0} measurement, timestamp {1} (in a future release)", already.MeasOption.PrintName(), already.MeasDateTime.ToString());
}
IntegrationHelpers.BuildMeasurement(newacq, curdet, mo);
Measurement meas = NC.App.Opstate.Measurement;
meas.MeasDate = newacq.MeasDateTime; // use the date and time from the NCC file content
meas.Persist(); // preserve the basic results record
if (AssaySelector.ForMass(meas.MeasOption) && !meas.INCCAnalysisState.Methods.AnySelected())
{
ctrllog.TraceEvent(LogLevels.Warning, 437, "No mass methods for " + meas.INCCAnalysisState.Methods.selector.ToString());
}
try
{
ushort total_number_runs = 0;
double run_count_time = 0;
double total_good_count_time = 0;
if (irf.num_runs == 0)
{
ctrllog.TraceEvent(LogLevels.Error, 440, "This measurement has no good cycles.");
continue;
}
if (meas.MeasOption == AssaySelector.MeasurementOption.holdup)
{
continue;
}
/* convert to total count time */
total_number_runs = irf.num_runs;
total_good_count_time = irf.num_runs *
run_count_time;
meas.RequestedRepetitions = total_number_runs;
// convert runs to cycles
for (int i = 0; i < irf.num_runs; i++)
{
/* run date and time (IAEA format) */
AddReviewFileCycle(i, irf.runs[i], irf.times[i], meas, irf.Path);
if (i % 8 == 0)
{
FireEvent(EventType.ActionInProgress, this);
}
}
FireEvent(EventType.ActionInProgress, this);
// NEXT: handle true AAS cycles as in INCC5
if (meas.MeasOption == AssaySelector.MeasurementOption.verification &&
meas.INCCAnalysisState.Methods.Has(AnalysisMethod.AddASource) &&
meas.AcquireState.well_config == WellConfiguration.Passive)
{
ctrllog.TraceEvent(LogLevels.Error, 440, "No add-a-source data processed because the implementation is incomplete. AAS");
//AddASourceSetup aass = IntegrationHelpers.GetCurrentAASSParams(meas.Detector);
//for (int n = 1; n <= aass.number_positions; n++)
//{
// /* number of good runs */
// string l = td.reader.ReadLine();
// if (td.reader.EndOfStream)
// {
// ctrllog.TraceEvent(LogLevels.Error, 440, "No add-a-source data found in disk file. " + "AAS p" + n.ToString());
// }
//}
}
}
catch (Exception e)
{
NC.App.Opstate.SOH = OperatingState.Trouble;
ctrllog.TraceException(e, true);
ctrllog.TraceEvent(LogLevels.Error, 437, "NCC file processing stopped with error: '" + e.Message + "'");
}
finally
{
NC.App.Loggers.Flush();
}
FireEvent(EventType.ActionInProgress, this);
ComputeFromINCC5SRData(meas);
FireEvent(EventType.ActionInProgress, this);
}
NC.App.Opstate.ResetTokens();
NC.App.Opstate.SOH = OperatingState.Stopping;
NC.App.Opstate.StampOperationStopTime();
FireEvent(EventType.ActionFinished, this);
}
/// <summary>
/// Process one or more .NCC Review measurement data files, with related .NOP/.COP files.
/// see Import Operator Declarations from Operator Review and Measurements from Radiation Review p. 24,
/// See Operator Declaration File Format p. 87,
/// See Operator Declaration File Format for Curium Ratio Measurements p. 88,
/// See Radiation Review Measurement Data File Format p. 93, INCC Software Users Manual, March 29, 2009
/// </summary>
void INCCReviewFileProcessing()
{
FireEvent(EventType.ActionPrep, this);
NC.App.Opstate.StampOperationStartTime();
// This code would be the same for an interactive version of this operation
// > Start here
// first find and process and .NOP files
List<string> exts = new List<string>() { ".nop", ".cop" };
FileList<CSVFile> hdlr = new FileList<CSVFile>();
hdlr.Init(exts, ctrllog);
FileList<CSVFile> files = null;
// The INCC5 semantics
if (NC.App.AppContext.FileInputList == null)
files = (FileList<CSVFile>)hdlr.BuildFileList(NC.App.AppContext.FileInput, NC.App.AppContext.Recurse, true);
else
files = (FileList<CSVFile>)hdlr.BuildFileList(NC.App.AppContext.FileInputList);
// construct lists of isotopics and items from the NOP and COP files
OPFiles opfiles = new OPFiles();
opfiles.Process(files);
ctrllog.TraceEvent(LogLevels.Verbose, 33085, "NOP items " + opfiles.NOPItemIds.Count);
// process the NCC files only
INCCFileOrFolderInfo foo = new INCCFileOrFolderInfo(ctrllog, "*.NCC");
if (NC.App.AppContext.FileInputList == null)
foo.SetPath(NC.App.AppContext.FileInput);
else
foo.SetFileList(NC.App.AppContext.FileInputList);
List<INCCTransferBase> res = foo.Restore();
// use RemoveAll to cull those NCC files that reference a non-existent detector
DetectorList dl = NC.App.DB.Detectors;
foreach (INCCReviewFile rf in res)
{
List<Detector> tdk = dl.FindAll(d => 0 == string.Compare(d.Id.DetectorName, rf.detector, true));
if (tdk.Count < 1)
{
rf.skip = true;
ctrllog.TraceEvent(LogLevels.Warning, 33085, "No detector " + rf.detector + " defined, cannot complete processing NCC review file " + System.IO.Path.GetFileName(rf.Path));
}
}
res.RemoveAll(rf => (rf as INCCReviewFile).skip);
res.Sort((rf1, rf2) => // sort chronologically
{
return DateTime.Compare((rf1 as INCCReviewFile).dt, (rf2 as INCCReviewFile).dt);
});
/// end here > The sorted, filtered and processed list here would be returned to the UI for display and interactive selection
if (res == null || res.Count < 1)
{
NC.App.Opstate.StopTimer(0);
NC.App.Opstate.StampOperationStopTime();
FireEvent(EventType.ActionStop, this);
ctrllog.TraceEvent(LogLevels.Warning, 33085, "No useable NCC review files found in " + System.IO.Path.GetFullPath(foo.GetPath()));
return;
}
AcquireParameters orig_acq = new AcquireParameters(NC.App.Opstate.Measurement.AcquireState);
// Each NCC file is a separate measurement
foreach (INCCReviewFile irf in res)
{
ResetMeasurement();
if (NC.App.Opstate.IsQuitRequested)
break;
// Find the detector named in the NCC file (existence shown in earlier processing above)
Detector curdet = NC.App.DB.Detectors.Find(d => string.Compare(d.Id.DetectorName, irf.detector, true) == 0);
// set up acquire state based on the NCC file content
AcquireParameters newacq = ConfigureAcquireState(curdet, orig_acq, irf);
AssaySelector.MeasurementOption mo = NCCMeasOption(irf);
// make a temp MeasId
MeasId thisone = new MeasId(mo, newacq.MeasDateTime);
// get the list of measurement Ids for this detector
List<MeasId> list = NC.App.DB.MeasurementIds(curdet.Id.DetectorName, mo.PrintName());
MeasId already = list.Find(mid => mid.Equals(thisone));
if (already != null)
{
// URGENT: do the replacement as it says
ctrllog.TraceEvent(LogLevels.Warning, 33085, "Replacing the matching {0} measurement, timestamp {1} (in a future release)", already.MeasOption.PrintName(), already.MeasDateTime.ToString());
}
IntegrationHelpers.BuildMeasurement(newacq, curdet, mo);
Measurement meas = NC.App.Opstate.Measurement;
meas.MeasDate = newacq.MeasDateTime; // use the date and time from the NCC file content
meas.Persist(); // preserve the basic results record
if (AssaySelector.ForMass(meas.MeasOption) && !meas.INCCAnalysisState.Methods.AnySelected())
ctrllog.TraceEvent(LogLevels.Warning, 437, "No mass methods for " + meas.INCCAnalysisState.Methods.selector.ToString());
try
{
UInt16 total_number_runs = 0;
double run_count_time = 0;
double total_good_count_time = 0;
if (irf.num_runs == 0)
{
ctrllog.TraceEvent(LogLevels.Error, 440, "This measurement has no good cycles.");
continue;
}
if (meas.MeasOption == AssaySelector.MeasurementOption.holdup)
continue;
/* convert to total count time */
total_number_runs = irf.num_runs;
total_good_count_time = (double)irf.num_runs *
run_count_time;
meas.RequestedRepetitions = total_number_runs;
// convert runs to cycles
for (int i = 0; i < irf.num_runs; i++)
{
/* run date and time (IAEA format) */
AddReviewFileCycle(i, irf.runs[i], irf.times[i], meas, irf.Path);
if (i % 8 == 0)
FireEvent(EventType.ActionInProgress, this);
}
FireEvent(EventType.ActionInProgress, this);
// NEXT: handle true AAS cycles as in INCC5
if (meas.MeasOption == AssaySelector.MeasurementOption.verification &&
meas.INCCAnalysisState.Methods.Has(AnalysisMethod.AddASource) &&
meas.AcquireState.well_config == WellConfiguration.Passive)
{
ctrllog.TraceEvent(LogLevels.Error, 440, "No add-a-source data processed because I am lame. " + "AAS ");
//AddASourceSetup aass = IntegrationHelpers.GetCurrentAASSParams(meas.Detectors[0]);
//for (int n = 1; n <= aass.number_positions; n++)
//{
// /* number of good runs */
// string l = td.reader.ReadLine();
// if (td.reader.EndOfStream)
// {
// ctrllog.TraceEvent(LogLevels.Error, 440, "No add-a-source data found in disk file. " + "AAS p" + n.ToString());
// }
//}
}
}
catch (Exception e)
{
NC.App.Opstate.SOH = NCC.OperatingState.Trouble;
ctrllog.TraceException(e, true);
ctrllog.TraceEvent(LogLevels.Error, 437, "NCC file processing stopped with error: '" + e.Message + "'");
}
finally
{
NC.App.Loggers.Flush();
}
FireEvent(EventType.ActionInProgress, this);
ComputeFromINCC5SRData(meas);
FireEvent(EventType.ActionInProgress, this);
}
NC.App.Opstate.ResetTokens();
NC.App.Opstate.SOH = NCC.OperatingState.Stopping;
NC.App.Opstate.StampOperationStopTime();
FireEvent(EventType.ActionStop, this);
}
/// <summary>
/// Imprint a new measurement with as much information as possible from a results_rec.
/// </summary>
/// <param name="rec">The results_rec with the measurement details</param>
/// <param name="meaId">Unique id for the measurement, from the results_rec fields</param>
/// <param name="logger">logger handle</param>
/// <returns>A new measurement</returns>
public Measurement(INCCResults.results_rec rec, MeasId meaId, LMLoggers.LognLM logger)
{
HVCalibrationParameters hv = NCC.IntegrationHelpers.GetCurrentHVCalibrationParams(rec.det);
MeasurementTuple mt = new MeasurementTuple(new DetectorList(rec.det), rec.tests, rec.norm, rec.bkg, rec.iso, rec.acq, hv);
this.mt = mt;
this.logger = logger;
mid = meaId;
InitMisc();
if (rec.det.ListMode)
{
AnalysisParams = NC.App.LMBD.CountingParameters(rec.det, applySRFromDetector: true);
if (meaId.MeasOption.IsListMode()) // pure List Mode, not INCC5
{
// for a list-mode-only measurement with a multiplicity analyzer the detector SR params must match at least one of the multiplicity analyzer SR params
NCC.IntegrationHelpers.ApplyVSRChangesToDefaultDetector(this);
}
else // it is an INCC5 analysis driven with LM data
{
// prepare or identify an active CA entry with matching CA gatewidth and FA, with remaining SR params as the detector
AnalysisParams.PrepareMatchingVSR(rec.det.MultiplicityParams);
}
}
else
{
// prepare analyzer params from detector SR params
AnalysisParams = NC.App.LMBD.CountingParameters(rec.det, applySRFromDetector: false);
if (!AnalysisParams.Exists(w => { return((w is Multiplicity) && (w as Multiplicity).Equals(rec.det.MultiplicityParams)); }))
{
AnalysisParams.Add(rec.det.MultiplicityParams);
}
}
// get the INCC5 analysis methods
INCCAnalysisState = new INCCAnalysisState();
INCCSelector sel = new INCCSelector(rec.acq.detector_id, rec.acq.item_type);
AnalysisMethods am;
bool found = NC.App.DB.DetectorMaterialAnalysisMethods.TryGetValue(sel, out am);
if (found)
{
am.selector = sel; // gotta do this so that the equality operator is correct
INCCAnalysisState.Methods = am;
}
else
{
INCCAnalysisState.Methods = new AnalysisMethods(sel);
}
InitializeContext(clearCounterResults: true);
PrepareINCCResults();
// a list mode measurement may not have a multiplicity analyzer at all, create on results, copying the current values
if (CountingAnalysisResults.ContainsKey(rec.det.MultiplicityParams))
{
MultiplicityCountingRes mcr = (MultiplicityCountingRes)CountingAnalysisResults[rec.det.MultiplicityParams];
if (rec.mcr.AB.Unset)
{
SDTMultiplicityCalculator.SetAlphaBeta(rec.det.MultiplicityParams, rec.mcr); // works only if MaxBins is set
}
mcr.CopyFrom(rec.mcr); // copy the mcr results onto the first moskey entry
// the same results are copied to the full results structure
MeasOptionSelector mos = new MeasOptionSelector(MeasOption, rec.det.MultiplicityParams);
INCCResult result = INCCAnalysisState.Lookup(mos);
result.CopyFrom(rec.mcr);
}
Stratum = new Stratum(rec.st); // the stratum from the results rec
}
