Example #1
0
        public void Interpolate()
        {
            var regressorFactory = new LinearRegressorFactory();

            foreach (var key in Keys)
            {
                var readings      = this[key];
                var regressorPair = regressorFactory.GetAutoCalibrated(key);

                if (regressorPair == null)
                {
                    continue;
                }

                Action <PanTiltAxis> interpolateAxis = (axis) =>
                {
                    var calibrationReadings = readings[axis];
                    var pixelDeviations     = calibrationReadings.Keys.ToList();
                    pixelDeviations.Sort();
                    var minimumDeviation = pixelDeviations[0];
                    var maximumDeviation = pixelDeviations[pixelDeviations.Count - 1];

                    for (int i = minimumDeviation; i < maximumDeviation; i++)
                    {
                        if (!calibrationReadings.ContainsKey(i))
                        {
                            var readingSet = new ReadingSet();
                            readingSet.Accepted       = regressorPair[axis].Calculate(i);
                            readingSet.IsInterpolated = true;
                            calibrationReadings.Add(i, readingSet);
                        }
                    }
                };

                interpolateAxis(PanTiltAxis.Horizontal);
                interpolateAxis(PanTiltAxis.Vertical);
            }
        }
        /// <summary>
        /// Perform target alignment
        /// </summary>
        /// <param name="evidences">Evidences to align</param>
        /// <param name="baseline">Baseline evidences</param>
        /// <returns></returns>
        public LinearRegressionResult AlignTargets(List <Evidence> evidences, List <Evidence> baseline)
        {
            var observed  = new List <double>();
            var predicted = new List <double>();

            foreach (var evidence in baseline)
            {
                Predictor             = RetentionTimePredictorFactory.CreatePredictor(Options.PredictorType);
                evidence.PredictedNet = Predictor.GetElutionTime(Evidence.CleanSequence(evidence.Sequence));

                observed.Add(evidence.ObservedNet);
                predicted.Add(evidence.PredictedNet);
            }

            Regressor = LinearRegressorFactory.Create(Options.RegressionType);
            var result = Regressor.CalculateRegression(observed, predicted);

            foreach (var evidence in evidences)
            {
                evidence.ObservedNet = Regressor.Transform(result, evidence.ObservedNet);
            }

            return(result);
        }