public async Task FileSharing_WithUnauthorizeUser_ReturnsExpectedImageRecord()
{
var nodeRecordResponse = await JohnApi.GetNodesById(FileId);
var nodeRecord = JArray.Parse(await nodeRecordResponse.Content.ReadAsStringAsync()).First();
var nodeRecordId = nodeRecord["id"].ToObject <Guid>();
var recordResponse = await JohnApi.GetRecordEntityById(nodeRecordId);
var record = JObject.Parse(await recordResponse.Content.ReadAsStringAsync());
var recordId = record["id"].ToObject <Guid>();
var imageId = record["images"].First()["id"].ToObject <Guid>();
var blobResponse = await UnauthorizedApi.GetImagesRecordEntityById(recordId, imageId);
blobResponse.EnsureSuccessStatusCode();
blobResponse.StatusCode.Should().Be(HttpStatusCode.OK);
blobResponse.Content.Headers.ContentType.MediaType.Should().Be("application/octet-stream");
blobResponse.Content.Headers.ContentLength.Should().BeGreaterThan(10000);
blobResponse.Content.Headers.ContentDisposition.FileName.Should().Be("Aspirin.mol.svg");
}
public async Task MlProcessing_ModelTraining_AllGenericFilesPersisted()
{
var files = Harness.GetDependentFiles(FolderId, FileType.Image, FileType.Tabular, FileType.Pdf);
foreach (var id in files)
{
var fileResponse = JohnApi.GetFileEntityById(id).Result;
var fileJson = JToken.Parse(fileResponse.Content.ReadAsStringAsync().Result);
var fileNodeResponse = JohnApi.GetNodeById(id).Result;
fileNodeResponse.EnsureSuccessStatusCode();
fileJson["status"].ToObject <string>().Should().BeEquivalentTo("Processed");
var jsonNode = JToken.Parse(fileNodeResponse.Content.ReadAsStringAsync().Result);
jsonNode.Should().NotBeEmpty();
jsonNode.Should().ContainsJson($@"
{{
'id': '{fileJson["id"].ToObject<Guid>()}',
'type': 'File',
'subType': *EXIST*,
'blob': *EXIST*,
'status': '{fileJson["status"].ToObject<string>()}',
'ownedBy': '{JohnId}',
'createdBy': '{JohnId}',
'createdDateTime': *EXIST*,
'updatedBy': '{JohnId}',
'updatedDateTime': *EXIST*,
'name': '{fileJson["name"].ToObject<string>()}',
'parentId': '{fileJson["parentId"].ToObject<Guid>()}',
'version': {fileJson["version"].ToObject<int>()}
}}");
if (fileJson.Contains("images") && jsonNode.Contains("images"))
{
jsonNode["images"].Should().BeEquivalentTo(fileJson["images"]);
}
}
;
await Task.CompletedTask;
}
public async Task ReactionProcessing_ValidRnx_GenerateExpectedFileEntity()
{
var blobInfo = await BlobStorage.GetFileInfo(BlobId, JohnId.ToString());
blobInfo.Should().NotBeNull();
var fileEntityResponse = await JohnApi.GetFileEntityById(FileId);
var fileEntity = JsonConvert.DeserializeObject <JObject>(await fileEntityResponse.Content.ReadAsStringAsync());
fileEntity.Should().ContainsJson($@"
{{
'id': '{FileId}',
'blob': {{
'id': '{blobInfo.Id}',
'bucket': '{JohnId}',
'length': {blobInfo.Length},
'md5': '{blobInfo.MD5}'
}},
'subType': '{FileType.Records}',
'ownedBy': '{JohnId}',
'createdBy': '{JohnId}',
'createdDateTime': '{DateTime.UtcNow}',
'updatedBy': '{JohnId}',
'updatedDateTime': '{DateTime.UtcNow}',
'parentId': '{JohnId}',
'name': '{blobInfo.FileName}',
'status': '{FileStatus.Processed}',
'version': *EXIST*,
'totalRecords': 1,
'properties': {{
'fields': [
'Field1',
'Field2'
]
}}
}}" );
fileEntity["images"].Should().NotBeNull();
fileEntity["images"].Should().HaveCount(1);
}
public async Task FileSharing_WithAuthorizeUser_ReturnsExpectedBlobFileAndRecord()
{
var nodeRecordResponse = await JohnApi.GetNodesById(FileId);
var nodeRecord = JArray.Parse(await nodeRecordResponse.Content.ReadAsStringAsync()).First();
var nodeRecordId = nodeRecord["id"].ToObject <Guid>();
var recordResponse = await JohnApi.GetRecordEntityById(nodeRecordId);
var record = JObject.Parse(await recordResponse.Content.ReadAsStringAsync());
var recordId = record["id"].ToObject <Guid>();
var recordBlobId = record["blob"]["id"].ToObject <Guid>();
var blobRecordResponse = await JohnApi.GetBlobRecordEntityById(recordId, recordBlobId);
var recordString = await blobRecordResponse.Content.ReadAsStringAsync();
var blobFileResponse = await UnauthorizedApi.GetBlobFileEntityById(FileId, BlobId);
var fileString = await blobFileResponse.Content.ReadAsStringAsync();
recordString.Should().BeEquivalentTo(fileString);
}
public GetAllCategoryTrees(OsdrWebTestHarness fixture, ITestOutputHelper output) : base(fixture, output)
{
var categories = new List <TreeNode>()
{
new TreeNode("Projects", new List <TreeNode>()
{
new TreeNode("Projects One"),
new TreeNode("Projects Two")
})
};
for (int i = 0; i < 10; i++)
{
var response = JohnApi.PostData("/api/categorytrees/tree", categories).Result;
var content = response.Content.ReadAsStringAsync().Result;
var categoryId = Guid.Parse(content);
Harness.WaitWhileCategoryTreePersisted(categoryId);
}
}
public async Task MlProcessing_InvalidModelTraining_WaitsWhileAllAssociatedGenericFilesProcessed()
{
var modelId = await Fixture.GetDependentFilesExcept(FolderId, FileType.Image, FileType.Pdf, FileType.Tabular);
modelId.Should().HaveCount(1);
modelId.SingleOrDefault().Should().NotBeEmpty();
var dependentFiles = Fixture.GetDependentFiles(modelId.Single()).ToList();
dependentFiles.Should().HaveCount(2);
dependentFiles.ToList().ForEach(async id =>
{
var fileResponse = await JohnApi.GetFileEntityById(id);
fileResponse.EnsureSuccessStatusCode();
var jsonFile = JToken.Parse(await fileResponse.Content.ReadAsStringAsync());
jsonFile["status"].Should().BeEquivalentTo("Processed");
});
await Task.CompletedTask;
}
public async Task FileSharing_WithAuthorizeUser_ReturnsExpectedAllNodes()
{
var fileResponse = await JohnApi.GetNodes();
var nodes = JToken.Parse(await fileResponse.Content.ReadAsStringAsync());
nodes.Should().HaveCount(4);
var fileNames = new[]
{
"ringcount_0.mol",
"Aspirin.mol"
};
foreach (var node in nodes)
{
if (node["type"].ToObject <string>() == "File")
{
fileNames.Contains(node["name"].ToObject <string>()).Should().BeTrue();
}
}
}
public async Task CategoryTree_CreateNewCategoryTree_BuiltExpectedDocument()
{
var contentRequest = await JohnApi.GetData($"/api/categorytrees/tree/{CategoryId}");
var jsonCategory = await contentRequest.Content.ReadAsJObjectAsync();
jsonCategory.Should().HaveElement("id");
jsonCategory["id"].Value <string>().Should().Be(CategoryId.ToString());
jsonCategory.Should().HaveElement("createdBy");
jsonCategory["createdBy"].Value <string>().Should().Be(JohnId.ToString());
jsonCategory.Should().HaveElement("createdDateTime")
.And.HaveElement("createdDateTime")
.And.HaveElement("updatedDateTime");
jsonCategory.Should().HaveElement("version");
jsonCategory["version"].Value <int>().Should().Be(1);
jsonCategory.Should().HaveElement("nodes");
var treeNodes = jsonCategory["nodes"].Value <JArray>();
treeNodes.Should().HaveCount(1);
var mainNode = treeNodes.Single();
mainNode.Should().HaveElement("title");
mainNode["title"].Value <string>().Should().Be("Projects");
var insideNodes = mainNode["children"].Value <JArray>();
insideNodes.Should().HaveCount(2);
var titles = insideNodes.Select(i => i["title"].Value <string>());
titles.Should().Contain(new List <string> {
"Projects One", "Projects Two"
});
insideNodes[0].Should().HaveElement("id");
insideNodes[1].Should().HaveElement("id");
}
public async Task CategoryTree_UpdateCategoryTreeNode_UpdatedCategoryMayBeExpectedDocument()
{
var response = await JohnApi.PutData($"/api/categorytrees/tree/{CategoryId}/{NodeId}", Categories);
Harness.WaitWhileCategoryTreeUpdatedPersisted(CategoryId);
response = await JohnApi.GetData($"/api/categorytrees/tree/{CategoryId}");
response.EnsureSuccessStatusCode();
var jsonCategory = JToken.Parse(await response.Content.ReadAsStringAsync());
jsonCategory.Should().ContainsJson($@"
{{
'id': '{CategoryId}',
'createdBy': '{JohnId}',
'createdDateTime': *EXIST*,
'updatedBy': '{JohnId}',
'updatedDateTime': *EXIST*,
'version': 2,
'nodes': *EXIST*
}}");
}
public async Task CrystalProcessing_ValidMol_GenerateExpectedRecordNode()
{
var recordResponse = await JohnApi.GetNodesById(FileId);
var recordNodes = JsonConvert.DeserializeObject <JArray>(await recordResponse.Content.ReadAsStringAsync());
var recordId = recordNodes.First()["id"].ToObject <Guid>();
recordId.Should().NotBeEmpty();
var recordNodeResponse = await JohnApi.GetNodeById(recordId);
var recordNode = JsonConvert.DeserializeObject <JObject>(await recordNodeResponse.Content.ReadAsStringAsync());
recordNode.Should().NotBeEmpty();
recordNode.Should().ContainsJson($@"
{{
'id': '{recordId}',
'type': 'Record',
'subType': 'Crystal',
'name': 0,
'blob': {{
'bucket': '{JohnId}'
}},
'ownedBy':'{JohnId}',
'createdBy':'{JohnId}',
'createdDateTime': '{DateTime.UtcNow}',
'updatedBy':'{JohnId}',
'updatedDateTime': '{DateTime.UtcNow}',
'parentId': '{FileId}',
'version': *EXIST*,
'status': '{FileStatus.Processed}',
}}" );
recordNode["images"].Should().NotBeNull();
recordNode["images"].Should().HaveCount(3);
}
public async Task MlProcessing_ModelTraining_AllGenericFilesProcessed()
{
var models = Harness.GetDependentFilesExcept(FolderId, FileType.Image, FileType.Tabular, FileType.Pdf);
foreach (var modelId in models)
{
var model = await Session.Get <Model>(modelId);
model.Should().NotBeNull();
model.Status.Should().Be(ModelStatus.Processed);
await JohnApi.SetPublicModelsEntity(modelId, true);
Harness.WaitWhileModelShared(modelId);
var responseSSP = await JohnApi.CreateSingleStructurePridiction(new RunSingleStructurePrediction
{
Format = "SMILES",
ModelIds = new List <Guid> {
modelId
},
PropertyName = "name",
Structure = "C1C=CC=C1C1C=CC=C1"
});
var predictionId = JToken.Parse(await responseSSP.Content.ReadAsStringAsync())["predictionId"].ToObject <Guid>();
responseSSP.EnsureSuccessStatusCode();
var responseStatus = await JohnApi.GetPredictionStatus(predictionId);
var status = JToken.Parse(await responseStatus.Content.ReadAsStringAsync());
status["id"].ToObject <Guid>().ShouldBeEquivalentTo(predictionId);
// status["status"].ToObject<string>().ShouldAllBeEquivalentTo("CALCULATING");
}
await Task.CompletedTask;
}
public async Task UpdateMetadata_UpdateGenericMetadata_ExpectedRenamedFolder()
{
var processedFile = await Harness.Session.Get <File>(FileId);
var url = $"/api/entities/files/{FileId}?version={processedFile.Version}";
var data = $"[{{'op':'replace','path':'Metadata','value':[{{'name':'test1', 'value': 'value1'}}]}}]";
JohnApi.PatchData(url, data).Wait();
Harness.WaitMetadataUpdated(FileId);
var response = await JohnApi.GetFileEntityById(FileId);
response.EnsureSuccessStatusCode();
var json = JToken.Parse(await response.Content.ReadAsStringAsync());
json.Should().ContainsJson($@"
{{
'id': '{FileId}',
'createdBy': '{JohnId}',
'createdDateTime': *EXIST*,
'updatedBy': '{JohnId}',
'updatedDateTime': *EXIST*,
'ownedBy': '{JohnId}',
'version': 8,
'properties': {{
'metadata':
[
{{
'name': 'test1',
'value': 'value1'
}}
]
}}
}}");
}
public async Task CategoryTreeOperations_GetAllCategoryTrees_ExpectedListOfCategories()
{
var response = await JohnApi.GetData($"/api/categorytrees/tree");
response.EnsureSuccessStatusCode();
var content = await response.Content.ReadAsStringAsync();
var jsonCategories = JArray.Parse(await response.Content.ReadAsStringAsync());
jsonCategories.Should().NotBeEmpty();
foreach (var category in jsonCategories.Children())
{
category.Should().ContainsJson($@"
{{
'id': *EXIST*,
'createdBy': '{JohnId}',
'createdDateTime': *EXIST*,
'updatedBy': '{JohnId}',
'updatedDateTime': *EXIST*,
'version': *EXIST*
}}");
}
}
public async Task FolderOperation_RenameFolder_ExpectedRenamedFolder()
{
await JohnApi.RenameFolder(_folderId, "renamed folder");
Harness.WaitWhileFolderRenamed(_folderId);
var response = await JohnApi.GetFolder(_folderId);
response.EnsureSuccessStatusCode();
var jsonFolder = JToken.Parse(await response.Content.ReadAsStringAsync());
jsonFolder.Should().ContainsJson($@"
{{
'id': '{_folderId}',
'createdBy': '{JohnId}',
'createdDateTime': *EXIST*,
'updatedBy': '{JohnId}',
'updatedDateTime': *EXIST*,
'ownedBy': '{JohnId}',
'name': 'renamed folder',
'status': 'Created',
'version': 2
}}" );
}
public async Task CategoryTree_UpdateCategoryTreeNode_UpdatedCategoryMayBeExpectedDocument()
{
var json = $@"[
{{
'title': 'Level 0: Main Node 1',
'children': [
{{ 'title': 'Level 1: Node 1' }},
{{ 'title': 'Level 1: Node 2' }}
]
}}
]";
var url = $"/api/categorytrees/tree/{CategoryId}";
var data = $"[{{'op':'replace','path':'nodes','value': {json} }}]";
var response = await JohnApi.PatchData(url, data);
Harness.WaitWhileCategoryTreeUpdatedPersisted(CategoryId);
response = await JohnApi.GetData($"/api/categorytrees/tree/{CategoryId}");
response.EnsureSuccessStatusCode();
var jsonCategory = JToken.Parse(await response.Content.ReadAsStringAsync());
jsonCategory.Should().ContainsJson($@"
{{
'id': '{CategoryId}',
'createdBy': '{JohnId}',
'createdDateTime': *EXIST*,
'updatedBy': '{JohnId}',
'updatedDateTime': *EXIST*,
'version': 2,
'nodes': *EXIST*
}}");
}
public async Task MlProcessing_ModelTraining_WaitsWhileAllAssociatedGenericFilesProcessed()
{
var models = await Fixture.GetDependentFilesExcept(FolderId, FileType.Image, FileType.Tabular, FileType.Pdf);
models.Should().HaveCount(1);
foreach (var modelId in models)
{
var modelGenericFiles =
await Fixture.GetDependentFiles(modelId, FileType.Image, FileType.Tabular, FileType.Pdf);
modelGenericFiles.Should().HaveCount(5);
modelGenericFiles.ToList().ForEach(async fileId =>
{
var file = await Session.Get <File>(modelId);
file.Should().NotBeNull();
file.Status.Should().Be(FileStatus.Processed);
});
}
var reportFiles = await Fixture.GetDependentFiles(FolderId, FileType.Image, FileType.Tabular, FileType.Pdf);
reportFiles.Should().HaveCount(3);
reportFiles.ToList().ForEach(async id =>
{
var fileResponse = await JohnApi.GetFileEntityById(id);
fileResponse.EnsureSuccessStatusCode();
var jsonFile = JToken.Parse(await fileResponse.Content.ReadAsStringAsync());
jsonFile["status"].Should().BeEquivalentTo("Processed");
});
await Task.CompletedTask;
}
public async Task WebApi_AuthorizedAccessToProtectedResource_ReturnsSuccessResponse()
{
var response = await JohnApi.GetNodesMe();
response.EnsureSuccessStatusCode();
}
public async Task CategoryTree_UpdateNodeInNonExistantCategoryTree_ReturnsNotFound()
{
var response = await JohnApi.PutData($"/api/categorytrees/tree/{Guid.NewGuid()}/{NodeId}", Categories);
response.StatusCode.Should().Be(HttpStatusCode.NotFound);
}
public async Task ChemicalProcessing_ValidSdf_GenerateExpectedFileEntity()
{
var blobInfo = await BlobStorage.GetFileInfo(BlobId, JohnId.ToString());
blobInfo.Should().NotBeNull();
var fileEntityResponse = await JohnApi.GetFileEntityById(FileId);
var fileEntity = JsonConvert.DeserializeObject <JObject>(await fileEntityResponse.Content.ReadAsStringAsync());
fileEntity.Should().NotBeNull();
fileEntity.Should().ContainsJson($@"
{{
'id': '{FileId}',
'blob': {{
'id': '{blobInfo.Id}',
'bucket': '{JohnId}',
'length': {blobInfo.Length},
'md5': '{blobInfo.MD5}'
}},
'subType': '{FileType.Records}',
'ownedBy': '{JohnId}',
'createdBy': '{JohnId}',
'createdDateTime': *EXIST*,
'updatedBy': '{JohnId}',
'updatedDateTime': *EXIST*,
'parentId': '{JohnId}',
'name': '{blobInfo.FileName}',
'status': '{FileStatus.Processed}',
'version': 8,
'totalRecords': 10,
'properties': {{
'fields': [
'DATABASE_ID',
'DATABASE_NAME',
'SMILES',
'INCHI_IDENTIFIER',
'INCHI_KEY',
'FORMULA',
'MOLECULAR_WEIGHT',
'EXACT_MASS',
'JCHEM_ACCEPTOR_COUNT',
'JCHEM_AVERAGE_POLARIZABILITY',
'JCHEM_BIOAVAILABILITY',
'JCHEM_DONOR_COUNT',
'JCHEM_FORMAL_CHARGE',
'JCHEM_GHOSE_FILTER',
'JCHEM_IUPAC',
'ALOGPS_LOGP',
'JCHEM_LOGP',
'ALOGPS_LOGS',
'JCHEM_MDDR_LIKE_RULE',
'JCHEM_NUMBER_OF_RINGS',
'JCHEM_PHYSIOLOGICAL_CHARGE',
'JCHEM_PKA',
'JCHEM_PKA_STRONGEST_ACIDIC',
'JCHEM_PKA_STRONGEST_BASIC',
'JCHEM_POLAR_SURFACE_AREA',
'JCHEM_REFRACTIVITY',
'JCHEM_ROTATABLE_BOND_COUNT',
'JCHEM_RULE_OF_FIVE',
'ALOGPS_SOLUBILITY',
'JCHEM_TRADITIONAL_IUPAC',
'JCHEM_VEBER_RULE',
'DRUGBANK_ID',
'SECONDARY_ACCESSION_NUMBERS',
'DRUG_GROUPS',
'GENERIC_NAME',
'PRODUCTS',
'SALTS',
'SYNONYMS',
'INTERNATIONAL_BRANDS',
'JCHEM_ATOM_COUNT'
],
'chemicalProperties': [
'MOST_ABUNDANT_MASS',
'MONOISOTOPIC_MASS',
'MOLECULAR_WEIGHT',
'MOLECULAR_FORMULA',
'SMILES',
'InChIKey',
'InChI'
]
}}
}}" );
fileEntity["images"].Should().NotBeNull();
fileEntity["images"].Should().HaveCount(1);
}
public async Task CategoryTree_GetNonExistantCategoryTree_ReturnsNotFoundCode()
{
var response = await JohnApi.GetData($"/api/categorytrees/tree/{Guid.NewGuid()}");
response.StatusCode.Should().Be(HttpStatusCode.NotFound);
}
public async Task CategoryTree_UpdateExistantCategoryTree_BuiltExpectedDocument()
{
var contentRequest = await JohnApi.GetData($"/api/categorytrees/tree/{CategoryId}");
var jsonCategory = await contentRequest.Content.ReadAsJObjectAsync();
jsonCategory.Should().HaveElement("id");
jsonCategory["id"].Value <string>().Should().Be(CategoryId.ToString());
jsonCategory.Should().HaveElement("createdBy");
jsonCategory["createdBy"].Value <string>().Should().Be(JohnId.ToString());
jsonCategory.Should().HaveElement("createdDateTime")
.And.HaveElement("createdDateTime")
.And.HaveElement("updatedDateTime");
jsonCategory.Should().HaveElement("version");
jsonCategory["version"].Value <int>().Should().Be(2);
jsonCategory.Should().HaveElement("nodes");
var treeNodes = jsonCategory["nodes"].Value <JArray>();
treeNodes.Should().HaveCount(6);
treeNodes.Select(i => i.Should().HaveElement("id"));
var titles = treeNodes.Select(i => i["title"].Value <string>());
titles.Should().Contain(new List <string> {
"Level 0: Main Node 1", "NoNameNode", "1", "2", "3", "4"
});
var firstNode = treeNodes.Where(i => i.Value <string>("title") == "Level 0: Main Node 1").SingleOrDefault();
firstNode.Should().NotBeNull();
firstNode.Should().HaveElement("title");
var insideNodes = firstNode["children"].Value <JArray>();
insideNodes.Should().HaveCount(2);
var insideTitles = insideNodes.Select(i => i["title"].Value <string>());
insideTitles.Should().Contain(new List <string> {
"Level 1: Node 1", "Level 1: Node 2"
});
insideNodes.Select(i => i.Should().HaveElement("id"));
var lastNode = treeNodes.Where(i => i.Value <string>("title") == "4").SingleOrDefault();
lastNode.Should().NotBeNull();
var lastNodeInsideNodes = lastNode["children"].Value <JArray>();
lastNodeInsideNodes.Should().HaveCount(2);
var lastNodeInsideTitles = lastNodeInsideNodes.Select(i => i["title"].Value <string>());
lastNodeInsideTitles.Should().Contain(new List <string> {
"4-1", "4-2"
});
lastNodeInsideNodes.Select(i => i.Should().HaveElement("id"));
var lastNodeSubnode = lastNodeInsideNodes.Where(i => i.Value <string>("title") == "4-2").SingleOrDefault();
lastNodeSubnode.Should().NotBeNull();
var lastSubnodeChildren = lastNodeSubnode["children"].Value <JArray>();
lastSubnodeChildren.Should().HaveCount(1);
lastSubnodeChildren.Single().Should().HaveElement("id");
}
public async Task CategoryTreeOperations_DeleteNodeFromNonExistantCategoryTree_ReturnsNotFoundCode()
{
var response = await JohnApi.DeleteData($"/api/categorytrees/tree/{Guid.NewGuid()}/{ChildCategoryId}");
response.StatusCode.Should().Be(HttpStatusCode.NotFound);
}
public async Task ChemicalProcessing_InvalidSdf_GenerateExpectedRecordNodeAndRecordEntity()
{
var recordResponse = await JohnApi.GetNodesById(FileId);
var recordNodes = JsonConvert.DeserializeObject <JArray>(await recordResponse.Content.ReadAsStringAsync());
recordNodes.Should().HaveCount(5);
var recordNodesIndex = 0;
var listStatus = new List <FileStatus> {
FileStatus.Failed, FileStatus.Processed
};
//var listType = new List<string> { "InvalidRecord", "Record" };
foreach (var recordNodesItem in recordNodes)
{
var recordId = recordNodesItem["id"].ToObject <Guid>();
recordId.Should().NotBeEmpty();
var recordEntityResponse = await JohnApi.GetRecordEntityById(recordId);
var recordEntity = JsonConvert.DeserializeObject <JObject>(await recordEntityResponse.Content.ReadAsStringAsync());
recordEntity.Should().NotBeEmpty();
recordEntity.Should().ContainsJson($@"
{{
'id': '{recordId}',
'type': 'Structure',
'fileId': '{FileId}',
'ownedBy': '{JohnId}',
'createdBy': '{JohnId}',
'createdDateTime': *EXIST*,
'updatedBy': '{JohnId}',
'updatedDateTime': *EXIST*,
'index': {recordNodesIndex},
'status': '{listStatus[recordNodesIndex]}',
'version': *EXIST*
}}" );
var recordNodeResponse = await JohnApi.GetNodeById(recordId);
var recordNode = JsonConvert.DeserializeObject <JObject>(await recordNodeResponse.Content.ReadAsStringAsync());
recordNode.Should().NotBeEmpty();
recordNode.Should().ContainsJson($@"
{{
'id': '{recordId}',
'type': 'Record',
'subType': 'Structure',
'ownedBy': '{JohnId}',
'createdBy': '{JohnId}',
'createdDateTime': *EXIST*,
'updatedBy': '{JohnId}',
'updatedDateTime': *EXIST*,
'parentId': '{FileId}',
'version': *EXIST*,
'status': '{listStatus[recordNodesIndex]}'
}}" );
recordNodesIndex++;
}
}
public async Task ChemicalProcessing_ValidMol_GenerateExpectedRecordEntity()
{
var recordResponse = await JohnApi.GetNodesById(FileId);
var recordNodes = JsonConvert.DeserializeObject <JArray>(await recordResponse.Content.ReadAsStringAsync());
var recordId = recordNodes.First()["id"].ToObject <Guid>();
recordId.Should().NotBeEmpty();
var recordEntityResponse = await JohnApi.GetRecordEntityById(recordId);
var recordEntity = JsonConvert.DeserializeObject <JObject>(await recordEntityResponse.Content.ReadAsStringAsync());
recordEntity.Should().NotBeEmpty();
recordEntity.Should().ContainsJson($@"
{{
'id': '{recordId}',
'type': 'Structure',
'fileId': '{FileId}',
'blob': {{
'bucket': '{JohnId}',
}},
'ownedBy': '{JohnId}',
'createdBy': '{JohnId}',
'createdDateTime': '{DateTime.UtcNow}',
'updatedBy': '{JohnId}',
'updatedDateTime': '{DateTime.UtcNow}',
'index': 0,
'status': '{FileStatus.Processed}',
'version': *EXIST*,
'properties': {{
'fields': [
{{
'name': 'StdInChI',
'value': 'InChI=1S/C9H8O4/c1-6(10)13-8-5-3-2-4-7(8)9(11)12/h2-5H,1H3,(H,11,12)'
}},
{{
'name': 'StdInChIKey',
'value': 'BSYNRYMUTXBXSQ-UHFFFAOYSA-N'
}},
{{
'name': 'SMILES',
'value': 'CC(OC1=C(C(=O)O)C=CC=C1)=O'
}},
{{
'name': 'AuxInfo',
'value': '1/1/N:1,8,7,9,6,2,10,5,11,3,12,13,4/E:(11,12)/rA:13nCCOOCCCCCCCOO/rB:s1;d2;s2;s4;s5;d6;s7;d8;d5s9;s10;s11;d11;/rC:5.982,-4.6062,0;5.318,-3.4576,0;5.982,-2.3031,0;3.99,-3.4576,0;3.326,-2.3031,0;3.99,-1.1545,0;3.326,0,0;1.992,0,0;1.328,-1.1545,0;1.992,-2.3031,0;1.328,-3.4576,0;0,-3.4576,0;1.992,-4.6062,0;'
}},
{{
'name': 'Formula',
'value': 'C9 H8 O4'
}},
{{
'name': 'Mw',
'value': '180.1574'
}},
{{
'name': 'CSID',
'value': '2157'
}}
],
'chemicalProperties': *EXIST*
}}
}}" );
recordEntity["images"].Should().NotBeNull();
recordEntity["images"].Should().HaveCount(1);
}
