Example #1
0
        public static void segmentation_correspondences(Narray<Intarray> outsegments, Intarray seg, Intarray cseg)
        {
            if (NarrayUtil.Max(seg) >= 10000)
                throw new Exception("CHECK_ARG: (max(seg)<10000)");
            if (NarrayUtil.Max(cseg) >= 10000)
                throw new Exception("CHECK_ARG: (max(cseg)<10000)");

            int nseg = NarrayUtil.Max(seg) + 1;
            int ncseg = NarrayUtil.Max(cseg) + 1;
            Intarray overlaps = new Intarray(nseg, ncseg);
            overlaps.Fill(0);
            if (seg.Length() != cseg.Length())
                throw new Exception("CHECK_ARG: (seg.Length()==cseg.Length())");
            for (int i = 0; i < seg.Length(); i++)
                overlaps[seg.At1d(i), cseg.At1d(i)]++;
            outsegments.Clear();
            outsegments.Resize(ncseg);
            for (int i = 0; i < nseg; i++)
            {
                int j = NarrayRowUtil.RowArgMax(overlaps, i);
                if (!(j >= 0 && j < ncseg))
                    throw new Exception("ASSERT: (j>=0 && j<ncseg)");
                if (outsegments[j] == null)
                    outsegments[j] = new Intarray();
                outsegments[j].Push(i);
            }
        }
Example #2
0
 public static bool Equals(Intarray a, Intarray b)
 {
     if (a.Length() != b.Length()) return false;
     for (int i = 0; i < a.Length(); i++)
         if (a.UnsafeAt1d(i) != b.UnsafeAt1d(i)) return false;
     return true;
 }
Example #3
0
 /// <summary>
 /// Compute a classmap that maps a set of possibly sparse classes onto a dense
 /// list of new classes and vice versa
 /// </summary>
 public static void ClassMap(Intarray out_class_to_index, Intarray out_index_to_class, Intarray classes)
 {
     int nclasses = NarrayUtil.Max(classes) + 1;
     Intarray hist = new Intarray(nclasses);
     hist.Fill(0);
     for (int i = 0; i < classes.Length(); i++)
     {
         if (classes[i] == -1) continue;
         hist[classes[i]]++;
     }
     int count = 0;
     for (int i = 0; i < hist.Length(); i++)
         if (hist[i] > 0) count++;
     out_class_to_index.Resize(nclasses);
     out_class_to_index.Fill(-1);
     out_index_to_class.Resize(count);
     out_index_to_class.Fill(-1);
     int index = 0;
     for (int i = 0; i < hist.Length(); i++)
     {
         if (hist[i] > 0)
         {
             out_class_to_index[i] = index;
             out_index_to_class[index] = i;
             index++;
         }
     }
     CHECK_ARG(out_class_to_index.Length() == nclasses, "class_to_index.Length() == nclasses");
     CHECK_ARG(out_index_to_class.Length() == NarrayUtil.Max(out_class_to_index) + 1,
         "index_to_class.Length() == Max(class_to_index)+1");
     CHECK_ARG(out_index_to_class.Length() <= out_class_to_index.Length(),
         "index_to_class.Length() <= class_to_index.Length()");
 }
Example #4
0
        /// <summary>
        /// Copy one FST to another.
        /// </summary>
        /// <param name="dst">The destination. Will be cleared before copying.</param>
        /// <param name="src">The FST to copy.</param>
        public static void fst_copy(IGenericFst dst, IGenericFst src)
        {
            dst.Clear();
            int n = src.nStates();

            for (int i = 0; i < n; i++)
            {
                dst.NewState();
            }
            dst.SetStart(src.GetStart());
            for (int i = 0; i < n; i++)
            {
                dst.SetAccept(i, src.GetAcceptCost(i));
                Intarray   targets = new Intarray(), outputs = new Intarray(), inputs = new Intarray();
                Floatarray costs = new Floatarray();
                src.Arcs(inputs, targets, outputs, costs, i);
                int inlen = inputs.Length();
                if (inlen != targets.Length())
                {
                    throw new Exception("ASSERT: inputs.length() == targets.length()");
                }
                if (inlen != outputs.Length())
                {
                    throw new Exception("ASSERT: inputs.length() == outputs.length()");
                }
                if (inlen != costs.Length())
                {
                    throw new Exception("ASSERT: inputs.length() == costs.length()");
                }
                for (int j = 0; j < inputs.Length(); j++)
                {
                    dst.AddTransition(i, targets.At1d(j), outputs.At1d(j), costs.At1d(j), inputs.At1d(j));
                }
            }
        }
Example #5
0
        public static void rseg_to_cseg(Intarray cseg, Intarray rseg, Intarray ids)
        {
            Intarray map = new Intarray(NarrayUtil.Max(rseg) + 1);

            map.Fill(0);
            int color = 0;

            for (int i = 0; i < ids.Length(); i++)
            {
                if (ids[i] == 0)
                {
                    continue;
                }
                color++;
                int start = ids[i] >> 16;
                int end   = ids[i] & 0xFFFF;
                if (start > end)
                {
                    throw new Exception("segmentation encoded in IDs looks seriously broken!");
                }
                if (start >= map.Length() || end >= map.Length())
                {
                    throw new Exception("segmentation encoded in IDs doesn't fit!");
                }
                for (int j = start; j <= end; j++)
                {
                    map[j] = color;
                }
            }
            cseg.MakeLike(rseg);
            for (int i = 0; i < cseg.Length1d(); i++)
            {
                cseg.Put1d(i, map[rseg.At1d(i)]);
            }
        }
Example #6
0
        public override void TrainDense(IDataset ds)
        {
            //PSet("%nsamples", ds.nSamples());
            float split      = PGetf("cv_split");
            int   mlp_cv_max = PGeti("cv_max");

            if (crossvalidate)
            {
                // perform a split for cross-validation, making sure
                // that we don't have the same sample in both the
                // test and the training set (even if the data set
                // is the result of resampling)
                Intarray test_ids = new Intarray();
                Intarray ids      = new Intarray();
                for (int i = 0; i < ds.nSamples(); i++)
                {
                    ids.Push(ds.Id(i));
                }
                NarrayUtil.Uniq(ids);
                Global.Debugf("cvdetail", "reduced {0} ids to {1} ids", ds.nSamples(), ids.Length());
                NarrayUtil.Shuffle(ids);
                int nids = (int)((1.0 - split) * ids.Length());
                nids = Math.Min(nids, mlp_cv_max);
                for (int i = 0; i < nids; i++)
                {
                    test_ids.Push(ids[i]);
                }
                NarrayUtil.Quicksort(test_ids);
                Intarray training = new Intarray();
                Intarray testing  = new Intarray();
                for (int i = 0; i < ds.nSamples(); i++)
                {
                    int id = ds.Id(i);
                    if (ClassifierUtil.Bincontains(test_ids, id))
                    {
                        testing.Push(i);
                    }
                    else
                    {
                        training.Push(i);
                    }
                }
                Global.Debugf("cvdetail", "#training {0} #testing {1}",
                              training.Length(), testing.Length());
                PSet("%ntraining", training.Length());
                PSet("%ntesting", testing.Length());
                Datasubset trs = new Datasubset(ds, training);
                Datasubset tss = new Datasubset(ds, testing);
                TrainBatch(trs, tss);
            }
            else
            {
                TrainBatch(ds, ds);
            }
        }
Example #7
0
        /// <summary>
        /// The main loop iteration.
        /// </summary>
        public void Radiate()
        {
            Clear();

            //logger("beam", beam);
            //logger("beamcost", beamcost);

            int control_beam_start = beam.Length();

            for (int i = 0; i < control_beam_start; i++)
            {
                TryAccept(i);
            }

            // in this loop, traversal may add "control nodes" to the beam
            for (int i = 0; i < beam.Length(); i++)
            {
                Traverse(stree.v1[beam[i]], stree.v2[beam[i]],
                         beamcost[i], i);
            }

            // try accepts from control beam nodes
            // (they're not going to the next beam)
            for (int i = control_beam_start; i < beam.Length(); i++)
            {
                TryAccept(i);
            }


            Intarray   new_beam     = new Intarray();
            Floatarray new_beamcost = new Floatarray();

            for (int i = 0; i < nbest.Length(); i++)
            {
                int k = nbest.Tag(i);
                if (parent_trails[k] < 0) // skip the control beam nodes
                {
                    continue;
                }
                new_beam.Push(stree.Add(beam[parent_trails[k]],
                                        all_targets1[k], all_targets2[k],
                                        all_inputs[k], all_outputs[k],
                                        all_costs[k]));
                new_beamcost.Push(beamcost[parent_trails[k]] + all_costs[k]);
                //logger.format("to new beam: trail index %d, stree %d, target %d,%d",
                //k, new_beam[new_beam.length() - 1], all_targets1[k], all_targets2[k]);
            }
            //move(beam, new_beam);
            beam.Move(new_beam);
            //move(beamcost, new_beamcost);
            beamcost.Move(new_beamcost);
        }
Example #8
0
        public override void Info()
        {
            bool bak = Logger.Default.verbose;

            Logger.Default.verbose = true;
            Logger.Default.WriteLine("Linerec");
            PPrint();
            Logger.Default.WriteLine(String.Format("segmenter: {0}", segmenter.IsEmpty ? "null" : segmenter.Object.Description));
            Logger.Default.WriteLine(String.Format("grouper: {0}", grouper.IsEmpty ? "null" : grouper.Object.Description));
            Logger.Default.WriteLine(String.Format("counts: {0} {1}", counts.Length(), NarrayUtil.Sum(counts)));
            //classifier.Object.Info();
            Logger.Default.verbose = bak;
        }
Example #9
0
 public static bool Equals(Intarray a, Intarray b)
 {
     if (a.Length() != b.Length())
     {
         return(false);
     }
     for (int i = 0; i < a.Length(); i++)
     {
         if (a.UnsafeAt1d(i) != b.UnsafeAt1d(i))
         {
             return(false);
         }
     }
     return(true);
 }
Example #10
0
 public bool GetCharSegmentation(Intarray image, int book, int page, int line)
 {
     image.Clear();
     bookstores[book].GetCharSegmentation(image, page, line, "gt");
     if (image.Length() > 0)
     {
         return(true);
     }
     bookstores[book].GetCharSegmentation(image, page, line, "");
     if (image.Length() > 0)
     {
         return(true);
     }
     return(false);
 }
Example #11
0
 /// <summary>
 /// Translate classes using a translation map
 /// </summary>
 private void ctranslate(Intarray result, Intarray values, Intarray translation)
 {
     result.Resize(values.Length());
     for (int i = 0; i < values.Length(); i++)
     {
         int v = values[i];
         if (v < 0)
         {
             result[i] = v;
         }
         else
         {
             result[i] = translation[v];
         }
     }
 }
Example #12
0
        public override void FindBestCuts()
        {
            unchecked
            {
                for (int i = 0; i < cutcosts.Length(); i++)
                {
                    NarrayUtil.ExtPut(dimage, i, (int)(cutcosts[i] + 10), 0xff0000);
                }
                for (int i = 0; i < cutcosts.Length(); i++)
                {
                    NarrayUtil.ExtPut(dimage, i, (int)(min_thresh + 10), 0x800000);
                }
            }
            Floatarray temp = new Floatarray();

            Gauss.Gauss1d(temp, cutcosts, 3.0f);
            cutcosts.Move(temp);
            SegmRoutine.local_minima(ref bestcuts, cutcosts, min_range, min_thresh);
            for (int i = 0; i < bestcuts.Length(); i++)
            {
                Narray <Point> cut = cuts[bestcuts[i]];
                for (int j = 0; j < cut.Length(); j++)
                {
                    Point p = cut[j];
                    NarrayUtil.ExtPut(dimage, p.X, p.Y, 0x00ff00);
                }
            }
            ///-if(debug.Length > 0) write_image_packed(debug, dimage);
            // dshow1d(cutcosts,"Y");
            //dshow(dimage,"Y");
        }
Example #13
0
        protected override void Train(IDataset ds)
        {
            if (!(ds.nSamples() > 0))
            {
                throw new Exception("nSamples of IDataset must be > 0");
            }
            if (!(ds.nFeatures() > 0))
            {
                throw new Exception("nFeatures of IDataset must be > 0");
            }
            if (c2i.Length() < 1)
            {
                Intarray raw_classes = new Intarray();
                raw_classes.ReserveTo(ds.nSamples());
                for (int i = 0; i < ds.nSamples(); i++)
                {
                    raw_classes.Push(ds.Cls(i));
                }
                ClassMap(c2i, i2c, raw_classes);

                /*Intarray classes = new Intarray();
                 * ctranslate(classes, raw_classes, c2i);*/
                //debugf("info","[mapped %d to %d classes]\n",c2i.length(),i2c.length());
            }
            TranslatedDataset mds = new TranslatedDataset(ds, c2i);

            TrainDense(mds);
        }
Example #14
0
        public static void line_segmentation_sort_x(Intarray segmentation)
        {
            if (NarrayUtil.Max(segmentation) > 100000)
            {
                throw new Exception("line_segmentation_merge_small_components: to many segments");
            }
            Narray <Rect> bboxes = new Narray <Rect>();

            ImgLabels.bounding_boxes(ref bboxes, segmentation);
            Floatarray x0s = new Floatarray();

            unchecked
            {
                x0s.Push((float)-999999);
            }
            for (int i = 1; i < bboxes.Length(); i++)
            {
                if (bboxes[i].Empty())
                {
                    x0s.Push(999999);
                }
                else
                {
                    x0s.Push(bboxes[i].x0);
                }
            }
            // dprint(x0s,1000); printf("\n");
            Narray <int> permutation  = new Intarray();
            Narray <int> rpermutation = new Intarray();

            NarrayUtil.Quicksort(permutation, x0s);
            rpermutation.Resize(permutation.Length());
            for (int i = 0; i < permutation.Length(); i++)
            {
                rpermutation[permutation[i]] = i;
            }
            // dprint(rpermutation,1000); printf("\n");
            for (int i = 0; i < segmentation.Length1d(); i++)
            {
                if (segmentation.At1d(i) == 0)
                {
                    continue;
                }
                segmentation.Put1d(i, rpermutation[segmentation.At1d(i)]);
            }
        }
Example #15
0
        /// <summary>
        /// Copy one FST to another, preserving only lowest-cost arcs.
        /// This is useful for visualization.
        /// </summary>
        /// <param name="dst">The destination. Will be cleared before copying.</param>
        /// <param name="src">The FST to copy.</param>
        public static void fst_copy_best_arcs_only(IGenericFst dst, IGenericFst src)
        {
            dst.Clear();
            int n = src.nStates();

            for (int i = 0; i < n; i++)
            {
                dst.NewState();
            }
            dst.SetStart(src.GetStart());
            for (int i = 0; i < n; i++)
            {
                dst.SetAccept(i, src.GetAcceptCost(i));
                Intarray   targets = new Intarray(), outputs = new Intarray(), inputs = new Intarray();
                Floatarray costs = new Floatarray();
                src.Arcs(inputs, targets, outputs, costs, i);
                int inlen = inputs.Length();
                if (inlen != targets.Length())
                {
                    throw new Exception("ASSERT: inputs.length() == targets.length()");
                }
                if (inlen != outputs.Length())
                {
                    throw new Exception("ASSERT: inputs.length() == outputs.length()");
                }
                if (inlen != costs.Length())
                {
                    throw new Exception("ASSERT: inputs.length() == costs.length()");
                }
                Dictionary <int, int> hash = new Dictionary <int, int>();
                for (int j = 0; j < n; j++)
                {
                    int t           = targets[j];
                    int best_so_far = -1;
                    if (hash.ContainsKey(t))
                    {
                        best_so_far = hash[t];
                    }
                    if (best_so_far == -1 || costs[j] < costs[best_so_far])
                    {
                        hash[t] = j;
                    }
                }
                Intarray keys = new Intarray();
                //hash.keys(keys);
                keys.Clear();
                foreach (int key in hash.Keys)
                {
                    keys.Push(key);
                }

                for (int k = 0; k < keys.Length(); k++)
                {
                    int j = hash[keys[k]];
                    dst.AddTransition(i, targets[j], outputs[j], costs[j], inputs[j]);
                }
            }
        }
Example #16
0
        public override void Charseg(ref Intarray outimage, Bytearray inarray)
        {
            Bytearray image = new Bytearray();

            image.Copy(inarray);
            OcrRoutine.binarize_simple(image);
            OcrRoutine.Invert(image);
            outimage.Copy(image);
            Intarray labels = new Intarray();

            labels.Copy(image);
            ImgLabels.label_components(ref labels);
            Narray <Rect> boxes = new Narray <Rect>();

            ImgLabels.bounding_boxes(ref boxes, labels);
            Intarray equiv = new Intarray(boxes.Length());

            for (int i = 0; i < boxes.Length(); i++)
            {
                equiv[i] = i;
            }
            for (int i = 1; i < boxes.Length(); i++)
            {
                Rect p = boxes[i];
                for (int j = 1; j < boxes.Length(); j++)
                {
                    if (i == j)
                    {
                        continue;
                    }
                    Rect q  = boxes[j];
                    int  x0 = Math.Max(p.x0, q.x0);
                    int  x1 = Math.Min(p.x1, q.x1);
                    int  iw = x1 - x0;
                    if (iw <= 0)
                    {
                        continue;         // no overlap
                    }
                    int   ow   = Math.Min(p.Width(), q.Width());
                    float frac = iw / (float)(ow);
                    if (frac < 0.5f)
                    {
                        continue;             // insufficient overlap
                    }
                    // printf("%d %d : %d %d : %g\n",i,j,iw,ow,frac);
                    equiv.Put1d(Math.Max(i, j), Math.Min(i, j));
                }
            }
            for (int i = 0; i < labels.Length(); i++)
            {
                labels.Put1d(i, equiv.At1d(labels.At1d(i)));
            }
            ImgLabels.renumber_labels(labels, 1);
            outimage.Move(labels);
            SegmRoutine.make_line_segmentation_white(outimage);
            SegmRoutine.check_line_segmentation(outimage);
        }
Example #17
0
        /// <summary>
        /// Compute a classmap that maps a set of possibly sparse classes onto a dense
        /// list of new classes and vice versa
        /// </summary>
        public static void ClassMap(Intarray out_class_to_index, Intarray out_index_to_class, Intarray classes)
        {
            int      nclasses = NarrayUtil.Max(classes) + 1;
            Intarray hist     = new Intarray(nclasses);

            hist.Fill(0);
            for (int i = 0; i < classes.Length(); i++)
            {
                if (classes[i] == -1)
                {
                    continue;
                }
                hist[classes[i]]++;
            }
            int count = 0;

            for (int i = 0; i < hist.Length(); i++)
            {
                if (hist[i] > 0)
                {
                    count++;
                }
            }
            out_class_to_index.Resize(nclasses);
            out_class_to_index.Fill(-1);
            out_index_to_class.Resize(count);
            out_index_to_class.Fill(-1);
            int index = 0;

            for (int i = 0; i < hist.Length(); i++)
            {
                if (hist[i] > 0)
                {
                    out_class_to_index[i]     = index;
                    out_index_to_class[index] = i;
                    index++;
                }
            }
            CHECK_ARG(out_class_to_index.Length() == nclasses, "class_to_index.Length() == nclasses");
            CHECK_ARG(out_index_to_class.Length() == NarrayUtil.Max(out_class_to_index) + 1,
                      "index_to_class.Length() == Max(class_to_index)+1");
            CHECK_ARG(out_index_to_class.Length() <= out_class_to_index.Length(),
                      "index_to_class.Length() <= class_to_index.Length()");
        }
Example #18
0
        public static void erase_small_components(Floatarray input, float mins = 0.2f, float thresh = 0.25f)
        {
            // compute a thresholded image for component labeling
            float    threshold  = thresh * NarrayUtil.Max(input);
            Intarray components = new Intarray();

            components.MakeLike(input);
            components.Fill(0);
            for (int i = 0; i < components.Length(); i++)
            {
                components[i] = (input[i] > threshold ? 1 : 0);
            }

            // compute the number of pixels in each component
            int      n      = ImgLabels.label_components(ref components);
            Intarray totals = new Intarray(n + 1);

            totals.Fill(0);
            for (int i = 0; i < components.Length(); i++)
            {
                totals[components[i]] = totals[components[i]] + 1;
            }
            totals[0] = 0;
            int biggest = NarrayUtil.ArgMax(totals);

            // erase small components
            float     minsize    = mins * totals[biggest];
            Bytearray keep       = new Bytearray(n + 1);
            float     background = NarrayUtil.Min(input);

            for (int i = 0; i < keep.Length(); i++)
            {
                keep[i] = (byte)(totals[i] > minsize ? 1 : 0);
            }
            for (int i = 0; i < input.Length(); i++)
            {
                if (keep[components[i]] == 0)
                {
                    input[i] = background;
                }
            }
        }
Example #19
0
        public override void SplitIndices(Intarray result1, Intarray result2, Intarray indices)
        {
            result1.MakeLike(indices);
            result2.MakeLike(indices);
            int k = l2.nStates();

            for (int i = 0; i < indices.Length(); i++)
            {
                result1.Put1d(i, indices.At1d(i) / k);
                result2.Put1d(i, indices.At1d(i) % k);
            }
        }
Example #20
0
        public static void segmentation_correspondences(Narray <Intarray> outsegments, Intarray seg, Intarray cseg)
        {
            if (NarrayUtil.Max(seg) >= 10000)
            {
                throw new Exception("CHECK_ARG: (max(seg)<10000)");
            }
            if (NarrayUtil.Max(cseg) >= 10000)
            {
                throw new Exception("CHECK_ARG: (max(cseg)<10000)");
            }

            int      nseg     = NarrayUtil.Max(seg) + 1;
            int      ncseg    = NarrayUtil.Max(cseg) + 1;
            Intarray overlaps = new Intarray(nseg, ncseg);

            overlaps.Fill(0);
            if (seg.Length() != cseg.Length())
            {
                throw new Exception("CHECK_ARG: (seg.Length()==cseg.Length())");
            }
            for (int i = 0; i < seg.Length(); i++)
            {
                overlaps[seg.At1d(i), cseg.At1d(i)]++;
            }
            outsegments.Clear();
            outsegments.Resize(ncseg);
            for (int i = 0; i < nseg; i++)
            {
                int j = NarrayRowUtil.RowArgMax(overlaps, i);
                if (!(j >= 0 && j < ncseg))
                {
                    throw new Exception("ASSERT: (j>=0 && j<ncseg)");
                }
                if (outsegments[j] == null)
                {
                    outsegments[j] = new Intarray();
                }
                outsegments[j].Push(i);
            }
        }
Example #21
0
        public static int count_samples(Intarray classes)
        {
            int count = 0;

            for (int i = 0; i < classes.Length(); i++)
            {
                if (classes[i] >= 0)
                {
                    count++;
                }
            }
            return(count);
        }
Example #22
0
        /// <summary>
        /// Remove epsilons (zeros) and converts integers to string.
        /// </summary>
        public static void remove_epsilons(out string outs, Intarray a)
        {
            StringBuilder sb = new StringBuilder();

            for (int i = 0; i < a.Length(); i++)
            {
                if (a[i] > 0)
                {
                    sb.Append((char)a[i]);
                }
            }
            outs = sb.ToString();
        }
Example #23
0
        /// <summary>
        /// Reverse the FST's arcs, adding a new start vertex (former accept).
        /// </summary>
        public static void fst_copy_reverse(IGenericFst dst, IGenericFst src, bool no_accept = false)
        {
            dst.Clear();
            int n = src.nStates();

            for (int i = 0; i <= n; i++)
            {
                dst.NewState();
            }
            if (!no_accept)
            {
                dst.SetAccept(src.GetStart());
            }
            dst.SetStart(n);
            for (int i = 0; i < n; i++)
            {
                dst.AddTransition(n, i, 0, src.GetAcceptCost(i), 0);
                Intarray   targets = new Intarray(), outputs = new Intarray(), inputs = new Intarray();
                Floatarray costs = new Floatarray();
                src.Arcs(inputs, targets, outputs, costs, i);
                if (inputs.Length() != targets.Length())
                {
                    throw new Exception("ASSERT: inputs.length() == targets.length()");
                }
                if (inputs.Length() != outputs.Length())
                {
                    throw new Exception("ASSERT: inputs.length() == outputs.length()");
                }
                if (inputs.Length() != costs.Length())
                {
                    throw new Exception("ASSERT: inputs.length() == costs.length()");
                }
                for (int j = 0; j < inputs.Length(); j++)
                {
                    dst.AddTransition(targets.At1d(j), i, outputs.At1d(j), costs.At1d(j), inputs.At1d(j));
                }
            }
        }
Example #24
0
        public void FindBestCuts()
        {
            /*Intarray segm = new Intarray();
             * segm.Copy(dimage);
             * ImgLabels.simple_recolor(segm);
             * ImgIo.write_image_packed("debug1.png", segm);*/
            unchecked
            {
                for (int i = 0; i < cutcosts.Length(); i++)
                {
                    NarrayUtil.ExtPut(dimage, i, (int)(cutcosts[i] + 10), 0xff0000);
                }
                for (int i = 0; i < cutcosts.Length(); i++)
                {
                    NarrayUtil.ExtPut(dimage, i, (int)(min_thresh + 10), 0x800000);
                }
            }
            Floatarray temp = new Floatarray();

            Gauss.Gauss1d(temp, cutcosts, cost_smooth);
            cutcosts.Move(temp);
            SegmRoutine.local_minima(ref bestcuts, cutcosts, min_range, min_thresh);
            for (int i = 0; i < bestcuts.Length(); i++)
            {
                Narray <Point> cut = cuts[bestcuts[i]];
                for (int j = 0; j < cut.Length(); j++)
                {
                    Point p = cut[j];
                    NarrayUtil.ExtPut(dimage, p.X, p.Y, 0x00ff00);
                }
            }

            /*segm.Copy(dimage);
             * ImgLabels.simple_recolor(segm);
             * ImgIo.write_image_packed("debug2.png", segm);*/
        }
Example #25
0
        public int Add(int parent, int vertex1, int vertex2,
                       int input, int output, float cost)
        {
            int n = parents.Length();

            //logger.format("stree: [%d]: parent %d, v1 %d, v2 %d, cost %f",
            //               n, parent, vertex1, vertex2, cost);
            parents.Push(parent);
            v1.Push(vertex1);
            v2.Push(vertex2);
            inputs.Push(input);
            outputs.Push(output);
            costs.Push(cost);
            return(n);
        }
Example #26
0
 /// <summary>
 /// Copy one FST to another.
 /// </summary>
 /// <param name="dst">The destination. Will be cleared before copying.</param>
 /// <param name="src">The FST to copy.</param>
 public static void fst_copy(IGenericFst dst, IGenericFst src)
 {
     dst.Clear();
     int n = src.nStates();
     for (int i = 0; i < n; i++)
         dst.NewState();
     dst.SetStart(src.GetStart());
     for (int i = 0; i < n; i++)
     {
         dst.SetAccept(i, src.GetAcceptCost(i));
         Intarray targets = new Intarray(), outputs = new Intarray(), inputs = new Intarray();
         Floatarray costs = new Floatarray();
         src.Arcs(inputs, targets, outputs, costs, i);
         int inlen = inputs.Length();
         if (inlen != targets.Length())
             throw new Exception("ASSERT: inputs.length() == targets.length()");
         if (inlen != outputs.Length())
             throw new Exception("ASSERT: inputs.length() == outputs.length()");
         if (inlen != costs.Length())
             throw new Exception("ASSERT: inputs.length() == costs.length()");
         for (int j = 0; j < inputs.Length(); j++)
             dst.AddTransition(i, targets.At1d(j), outputs.At1d(j), costs.At1d(j), inputs.At1d(j));
     }
 }
Example #27
0
        public override void Rescore(int from, int to, int output, float cost, int input)
        {
            Intarray t = m_targets[from];
            Intarray i = m_inputs[from];
            Intarray o = m_outputs[from];

            for (int j = 0; j < t.Length(); j++)
            {
                if (t[j] == to &&
                    i[j] == input &&
                    o[j] == output)
                {
                    m_costs[from][j] = cost;
                    break;
                }
            }
        }
Example #28
0
 public Dataset8(Narray<sbyte> data, Intarray classes)
     : this()
 {
     data.Copy(data);
     classes.Copy(classes);
     if (classes.Length() > 0)
     {
         nc = NarrayUtil.Max(classes) + 1;
         nf = data.Dim(1);
         //CHECK_ARG(NarrayUtil.Min(data) > -100 && NarrayUtil.Max(data) < 100, "min(data)>-100 && max(data)<100");
         CHECK_ARG(NarrayUtil.Min(classes) >= -1 && NarrayUtil.Max(classes) < 10000, "min(classes)>=-1 && max(classes)<10000");
     }
     else
     {
         nc = 0;
         nf = -1;
     }
 }
Example #29
0
 public Dataset8(Narray <sbyte> data, Intarray classes)
     : this()
 {
     data.Copy(data);
     classes.Copy(classes);
     if (classes.Length() > 0)
     {
         nc = NarrayUtil.Max(classes) + 1;
         nf = data.Dim(1);
         //CHECK_ARG(NarrayUtil.Min(data) > -100 && NarrayUtil.Max(data) < 100, "min(data)>-100 && max(data)<100");
         CHECK_ARG(NarrayUtil.Min(classes) >= -1 && NarrayUtil.Max(classes) < 10000, "min(classes)>=-1 && max(classes)<10000");
     }
     else
     {
         nc = 0;
         nf = -1;
     }
 }
Example #30
0
        /// <summary>
        /// Copy one FST to another, preserving only lowest-cost arcs.
        /// This is useful for visualization.
        /// </summary>
        /// <param name="dst">The destination. Will be cleared before copying.</param>
        /// <param name="src">The FST to copy.</param>
        public static void fst_copy_best_arcs_only(IGenericFst dst, IGenericFst src)
        {
            dst.Clear();
            int n = src.nStates();
            for (int i = 0; i < n; i++)
                dst.NewState();
            dst.SetStart(src.GetStart());
            for(int i = 0; i < n; i++)
            {
                dst.SetAccept(i, src.GetAcceptCost(i));
                Intarray targets = new Intarray(), outputs = new Intarray(), inputs = new Intarray();
                Floatarray costs = new Floatarray();
                src.Arcs(inputs, targets, outputs, costs, i);
                int inlen = inputs.Length();
                if (inlen != targets.Length())
                    throw new Exception("ASSERT: inputs.length() == targets.length()");
                if (inlen != outputs.Length())
                    throw new Exception("ASSERT: inputs.length() == outputs.length()");
                if (inlen != costs.Length())
                    throw new Exception("ASSERT: inputs.length() == costs.length()");
                Dictionary< int, int > hash = new Dictionary<int,int>();
                for(int j = 0; j < n; j++) {
                    int t = targets[j];
                    int best_so_far = -1;
                    if (hash.ContainsKey(t))
                        best_so_far = hash[t];
                    if(best_so_far == -1 || costs[j] < costs[best_so_far])
                        hash[t] = j;
                }
                Intarray keys = new Intarray();
                //hash.keys(keys);
                keys.Clear();
                foreach (int key in hash.Keys)
                {
                    keys.Push(key);
                }

                for(int k = 0; k < keys.Length(); k++) {
                    int j = hash[keys[k]];
                    dst.AddTransition(i, targets[j], outputs[j], costs[j], inputs[j]);
                }
            }
        }
Example #31
0
        protected static void write_node(BinaryWriter writer, IGenericFst fst, int index)
        {
            Intarray   inputs  = new Intarray();
            Intarray   targets = new Intarray();
            Intarray   outputs = new Intarray();
            Floatarray costs   = new Floatarray();

            fst.Arcs(inputs, targets, outputs, costs, index);
            int narcs = targets.Length();

            write_float(writer, fst.GetAcceptCost(index));
            write_int64_LE(writer, narcs);
            for (int i = 0; i < narcs; i++)
            {
                write_int32_LE(writer, inputs[i]);
                write_int32_LE(writer, outputs[i]);
                write_float(writer, costs[i]);
                write_int32_LE(writer, targets[i]);
            }
        }
Example #32
0
        public void reconstruct_edges(Intarray inputs,
                                      Intarray outputs,
                                      Floatarray costs,
                                      Intarray vertices)
        {
            int n = vertices.Length();

            inputs.Resize(n);
            outputs.Resize(n);
            costs.Resize(n);
            for (int i = 0; i < n - 1; i++)
            {
                int        source      = vertices[i];
                int        target      = vertices[i + 1];
                Intarray   out_ins     = new Intarray();
                Intarray   out_targets = new Intarray();
                Intarray   out_outs    = new Intarray();
                Floatarray out_costs   = new Floatarray();
                fst.Arcs(out_ins, out_targets, out_outs, out_costs, source);

                costs[i] = 1e38f;

                // find the best arc
                for (int j = 0; j < out_targets.Length(); j++)
                {
                    if (out_targets[j] != target)
                    {
                        continue;
                    }
                    if (out_costs[j] < costs[i])
                    {
                        inputs[i]  = out_ins[j];
                        outputs[i] = out_outs[j];
                        costs[i]   = out_costs[j];
                    }
                }
            }
            inputs[n - 1]  = 0;
            outputs[n - 1] = 0;
            costs[n - 1]   = fst.GetAcceptCost(vertices[n - 1]);
        }
Example #33
0
 public override void Charseg(ref Intarray outimage, Bytearray inarray)
 {
     Bytearray image = new Bytearray();
     image.Copy(inarray);
     OcrRoutine.binarize_simple(image);
     OcrRoutine.Invert(image);
     outimage.Copy(image);
     Intarray labels = new Intarray();
     labels.Copy(image);
     ImgLabels.label_components(ref labels);
     Narray<Rect> boxes = new Narray<Rect>();
     ImgLabels.bounding_boxes(ref boxes, labels);
     Intarray equiv = new Intarray(boxes.Length());
     for(int i=0; i<boxes.Length(); i++)
         equiv[i] = i;
     for(int i=1; i<boxes.Length(); i++) {
         Rect p = boxes[i];
         for(int j=1;j<boxes.Length();j++) {
             if(i==j) continue;
             Rect q = boxes[j];
             int x0 = Math.Max(p.x0, q.x0);
             int x1 = Math.Min(p.x1, q.x1);
             int iw = x1-x0;
             if(iw <= 0) continue; // no overlap
             int ow = Math.Min(p.Width(), q.Width());
             float frac = iw/(float)(ow);
             if(frac < 0.5f) continue; // insufficient overlap
             // printf("%d %d : %d %d : %g\n",i,j,iw,ow,frac);
             equiv.Put1d(Math.Max(i, j), Math.Min(i, j));
         }
     }
     for(int i=0; i<labels.Length(); i++)
         labels.Put1d(i, equiv.At1d(labels.At1d(i)));
     ImgLabels.renumber_labels(labels, 1);
     outimage.Move(labels);
     SegmRoutine.make_line_segmentation_white(outimage);
     SegmRoutine.check_line_segmentation(outimage);
 }
Example #34
0
        public void reconstruct_edges(Intarray inputs,
                               Intarray outputs,
                               Floatarray costs,
                               Intarray vertices)
        {
            int n = vertices.Length();
            inputs.Resize(n);
            outputs.Resize(n);
            costs.Resize(n);
            for (int i = 0; i < n - 1; i++)
            {
                int source = vertices[i];
                int target = vertices[i + 1];
                Intarray out_ins = new Intarray();
                Intarray out_targets = new Intarray();
                Intarray out_outs = new Intarray();
                Floatarray out_costs = new Floatarray();
                fst.Arcs(out_ins, out_targets, out_outs, out_costs, source);

                costs[i] = 1e38f;

                // find the best arc
                for (int j = 0; j < out_targets.Length(); j++)
                {
                    if (out_targets[j] != target) continue;
                    if (out_costs[j] < costs[i])
                    {
                        inputs[i] = out_ins[j];
                        outputs[i] = out_outs[j];
                        costs[i] = out_costs[j];
                    }
                }
            }
            inputs[n - 1] = 0;
            outputs[n - 1] = 0;
            costs[n - 1] = fst.GetAcceptCost(vertices[n - 1]);
        }
Example #35
0
        public bool Step()
        {
            int node = heap.Pop();

            if (node == n)
            {
                return(true);  // accept has popped up
            }
            // get outbound arcs
            Intarray   inputs  = new Intarray();
            Intarray   targets = new Intarray();
            Intarray   outputs = new Intarray();
            Floatarray costs   = new Floatarray();

            fst.Arcs(inputs, targets, outputs, costs, node);
            for (int i = 0; i < targets.Length(); i++)
            {
                int t = targets[i];
                if (came_from[t] == -1 || g[node] + costs[i] < g[t])
                {
                    // relax the edge
                    came_from[t] = node;
                    g[t]         = g[node] + costs[i];
                    heap.Push(t, g[t] + Convert.ToSingle(Heuristic(t)));
                }
            }
            if (accepted_from == -1 ||
                g[node] + fst.GetAcceptCost(node) < g_accept)
            {
                // relax the accept edge
                accepted_from = node;
                g_accept      = g[node] + fst.GetAcceptCost(node);
                heap.Push(n, g_accept);
            }
            return(false);
        }
Example #36
0
        /// <summary>
        /// Create char segmentation (cseg) files if missing
        /// </summary>
        /// <param name="bookPath">path to bookstore</param>
        /// <param name="modelFilename">Linerec model file</param>
        /// <param name="langModel">language model file</param>
        /// <param name="suffix">e.g., 'gt'</param>
        public void ComputeMissingCsegForBookStore(string bookPath, string model = "default.model",
                                                   string suffix = "", bool saveRseg = false, string langModel = "default.fst")
        {
            // create line recognizer
            Linerec linerec = Linerec.LoadLinerec(model);

            // create IBookStore
            IBookStore bookstore = new SmartBookStore();

            bookstore.SetPrefix(bookPath);
            bookstore.Info();

            // language model
            OcroFST lmodel = OcroFST.MakeOcroFst();

            lmodel.Load(langModel);

            // iterate lines of pages
            for (int page = 0; page < bookstore.NumberOfPages(); page++)
            {
                int nlines = bookstore.LinesOnPage(page);
                Console.WriteLine("Page {0} has {1} lines", page, nlines);
                for (int j = 0; j < nlines; j++)
                {
                    int line = bookstore.GetLineId(page, j);

                    Bytearray image = new Bytearray();
                    bookstore.GetLine(image, page, line);
                    Intarray cseg = new Intarray();
                    bookstore.GetCharSegmentation(cseg, page, line, suffix);
                    // check missing cseg file
                    if (cseg.Length() <= 0 && image.Length() > 0)
                    {
                        // recognize line
                        OcroFST  fst  = OcroFST.MakeOcroFst();
                        Intarray rseg = new Intarray();
                        linerec.RecognizeLine(rseg, fst, image);
                        // find best results
                        string     resText;
                        Intarray   inp       = new Intarray();
                        Floatarray costs     = new Floatarray();
                        double     totalCost = BeamSearch.beam_search(out resText, inp, costs, fst, lmodel, 100);
                        Console.WriteLine(bookstore.PathFile(page, line, suffix));
                        Console.Write("  beam_search score: {0}", totalCost);

                        /*string resText2;
                         * fst.BestPath(out resText2);*/

                        // write cseg to bookstore
                        string trans;
                        bookstore.GetLine(out trans, page, line, suffix);
                        resText = resText.Replace(" ", "");
                        if (String.IsNullOrEmpty(trans))
                        {
                            bookstore.PutLine(resText, page, line, suffix);
                            Console.Write("; transcript saved");
                        }
                        else if (trans == resText)
                        {
                            // convert inputs and rseg to cseg
                            SegmRoutine.rseg_to_cseg(cseg, rseg, inp);
                            bookstore.PutCharSegmentation(cseg, page, line, suffix);
                            Console.Write("; cseg saved");
                        }
                        else if (saveRseg)
                        {
                            // convert inputs and rseg to cseg
                            SegmRoutine.rseg_to_cseg(cseg, rseg, inp);
                            //SegmRoutine.remove_small_components(cseg, 4);

                            /*bookstore.PutCharSegmentation(cseg, page, line, suffix);
                             * Console.Write("; cseg saved");*/
                            SegmRoutine.make_line_segmentation_white(cseg);
                            ImgLabels.simple_recolor(cseg);
                            string v = "rseg";
                            if (!String.IsNullOrEmpty(suffix))
                            {
                                v += "."; v += suffix;
                            }
                            string rsegpath = bookstore.PathFile(page, line, v, "png");
                            ImgIo.write_image_packed(rsegpath, cseg);
                            Console.Write("; rseg saved");
                        }
                        Console.WriteLine();
                    }
                }
            }
        }
Example #37
0
        protected void rescale(Floatarray v, Floatarray input)
        {
            if (input.Rank() != 2)
                throw new Exception("CHECK_ARG: sub.Rank()==2");

            Floatarray sub = new Floatarray();
            // find the largest connected component
            // and crop to its bounding box
            // (use a binary version of the character
            // to compute the bounding box)
            Intarray components = new Intarray();
            float threshold = PGetf("threshold") * NarrayUtil.Max(input);
            Global.Debugf("biggestcc", "threshold {0}", threshold);
            components.MakeLike(input);
            components.Fill(0);
            for (int i = 0; i < components.Length(); i++)
                components[i] = (input[i] > threshold ? 1 : 0);
            int n = ImgLabels.label_components(ref components);
            Intarray totals = new Intarray(n + 1);
            totals.Fill(0);
            for (int i = 0; i < components.Length(); i++)
                totals[components[i]]++;
            totals[0] = 0;
            Narray<Rect> boxes = new Narray<Rect>();
            ImgLabels.bounding_boxes(ref boxes, components);
            int biggest = NarrayUtil.ArgMax(totals);
            Rect r = boxes[biggest];
            int pad = (int)(PGetf("pad") + 0.5f);
            r.PadBy(pad, pad);
            Global.Debugf("biggestcc", "({0}) {1}[{2}] :: {3} {4} {5} {6}",
                   n, biggest, totals[biggest],
                   r.x0, r.y0, r.x1, r.y1);

            // now perform normal feature extraction
            // (use the original grayscale input)
            sub = input;
            ImgMisc.Crop(sub, r);
            int csize = PGeti("csize");
            float s = Math.Max(sub.Dim(0), sub.Dim(1))/(float)csize;
            if(PGetf("noupscale") > 0 && s < 1.0f)
                s = 1.0f;
            float sig = s * PGetf("aa");
            float dx = (csize*s-sub.Dim(0))/2f;
            float dy = (csize*s-sub.Dim(1))/2f;
            if(sig > 1e-3f)
                Gauss.Gauss2d(sub, sig, sig);
            v.Resize(csize, csize);
            v.Fill(0f);
            for (int i = 0; i < csize; i++)
            {
                for (int j = 0; j < csize; j++)
                {
                    float x = i * s - dx;
                    float y = j * s - dy;
                    if (x < 0 || x >= sub.Dim(0)) continue;
                    if (y < 0 || y >= sub.Dim(1)) continue;
                    float value = ImgOps.bilin(sub, x, y);
                    v[i, j] = value;
                }
            }
            /*Global.Debugf("biggestcc", "{0} {1} ({2}) -> {3} {4} ({5})",
                   sub.Dim(0), sub.Dim(1), NarrayUtil.Max(sub),
                   v.Dim(0), v.Dim(1), NarrayUtil.Max(v));*/
        }
Example #38
0
        /// <summary>
        /// Create char segmentation (cseg) files if missing
        /// </summary>
        /// <param name="bookPath">path to bookstore</param>
        /// <param name="modelFilename">Linerec model file</param>
        /// <param name="langModel">language model file</param>
        /// <param name="suffix">e.g., 'gt'</param>
        public void ComputeMissingCsegForBookStore(string bookPath, string model = "default.model",
            string suffix = "", bool saveRseg = false, string langModel = "default.fst")
        {
            // create line recognizer
            Linerec linerec = Linerec.LoadLinerec(model);

            // create IBookStore
            IBookStore bookstore = new SmartBookStore();
            bookstore.SetPrefix(bookPath);
            bookstore.Info();

            // language model
            OcroFST lmodel = OcroFST.MakeOcroFst();
            lmodel.Load(langModel);

            // iterate lines of pages
            for (int page = 0; page < bookstore.NumberOfPages(); page++)
            {
                int nlines = bookstore.LinesOnPage(page);
                Console.WriteLine("Page {0} has {1} lines", page, nlines);
                for (int j = 0; j < nlines; j++)
                {
                    int line = bookstore.GetLineId(page, j);

                    Bytearray image = new Bytearray();
                    bookstore.GetLine(image, page, line);
                    Intarray cseg = new Intarray();
                    bookstore.GetCharSegmentation(cseg, page, line, suffix);
                    // check missing cseg file
                    if (cseg.Length() <= 0 && image.Length() > 0)
                    {
                        // recognize line
                        OcroFST fst = OcroFST.MakeOcroFst();
                        Intarray rseg = new Intarray();
                        linerec.RecognizeLine(rseg, fst, image);
                        // find best results
                        string resText;
                        Intarray inp = new Intarray();
                        Floatarray costs = new Floatarray();
                        double totalCost = BeamSearch.beam_search(out resText, inp, costs, fst, lmodel, 100);
                        Console.WriteLine(bookstore.PathFile(page, line, suffix));
                        Console.Write("  beam_search score: {0}", totalCost);
                        /*string resText2;
                        fst.BestPath(out resText2);*/

                        // write cseg to bookstore
                        string trans;
                        bookstore.GetLine(out trans, page, line, suffix);
                        resText = resText.Replace(" ", "");
                        if (String.IsNullOrEmpty(trans))
                        {
                            bookstore.PutLine(resText, page, line, suffix);
                            Console.Write("; transcript saved");
                        }
                        else if (trans == resText)
                        {
                            // convert inputs and rseg to cseg
                            SegmRoutine.rseg_to_cseg(cseg, rseg, inp);
                            bookstore.PutCharSegmentation(cseg, page, line, suffix);
                            Console.Write("; cseg saved");
                        }
                        else if (saveRseg)
                        {
                            // convert inputs and rseg to cseg
                            SegmRoutine.rseg_to_cseg(cseg, rseg, inp);
                            //SegmRoutine.remove_small_components(cseg, 4);
                            /*bookstore.PutCharSegmentation(cseg, page, line, suffix);
                            Console.Write("; cseg saved");*/
                            SegmRoutine.make_line_segmentation_white(cseg);
                            ImgLabels.simple_recolor(cseg);
                            string v = "rseg";
                            if (!String.IsNullOrEmpty(suffix)) { v += "."; v += suffix; }
                            string rsegpath = bookstore.PathFile(page, line, v, "png");
                            ImgIo.write_image_packed(rsegpath, cseg);
                            Console.Write("; rseg saved");
                        }
                        Console.WriteLine();

                    }
                }
            }
        }
Example #39
0
        public void TestTrainLenetCseg()
        {
            string bookPath = "data\\0000\\";
            string netFileName = "latin-lenet.model";

            Linerec.GDef("linerec", "use_reject", 1);
            Linerec.GDef("lenet", "junk", 1);
            Linerec.GDef("lenet", "epochs", 4);

            // create Linerec
            Linerec linerec;
            if (File.Exists(netFileName))
                linerec = Linerec.LoadLinerec(netFileName);
            else
            {
                linerec = new Linerec("lenet");
                LenetClassifier classifier = linerec.GetClassifier() as LenetClassifier;
                if (classifier != null)
                    classifier.InitNumSymbLatinAlphabet();
            }

            // temporary disable junk
            //linerec.DisableJunk = true;

            linerec.StartTraining();
            int nepochs = 10;
            LineSource lines = new LineSource();
            lines.Init(new string[] { "data2" });

            //linerec.GetClassifier().Set("epochs", 1);

            for (int epoch = 1; epoch <= nepochs; epoch++)
            {
                linerec.Epoch(epoch);

                // load cseg samples
                while (!lines.Done())
                {
                    lines.MoveNext();
                    Intarray cseg = new Intarray();
                    //Bytearray image = new Bytearray();
                    string transcript = lines.GetTranscript();
                    //lines.GetImage(image);
                    if (!lines.GetCharSegmentation(cseg) && cseg.Length() == 0)
                    {
                        Global.Debugf("warn", "skipping book {0} page {1} line {2} (no or bad cseg)",
                            lines.CurrentBook, lines.CurrentPage, lines.Current);
                        continue;
                    }
                    SegmRoutine.make_line_segmentation_black(cseg);
                    linerec.AddTrainingLine(cseg, transcript);
                }

                lines.Reset();
                lines.Shuffle();
                // do Train and clear Dataset
                linerec.FinishTraining();
                // do save
                if (epoch % 1 == 0)
                    linerec.Save(netFileName);

                // recognize test line
                bool bakDisJunk = linerec.DisableJunk;
                linerec.DisableJunk = false;
                DoTestLinerecRecognize(linerec, "data2\\", "test1.png");
                linerec.DisableJunk = bakDisJunk;
            }

            // finnaly save
            linerec.Save(netFileName);
        }
Example #40
0
        public override void Arcs(Intarray ids, Intarray targets, Intarray outputs, Floatarray costs, int node)
        {
            int n1 = node / l2.nStates();
            int n2 = node % l2.nStates();
            Intarray ids1 = new Intarray();
            Intarray ids2 = new Intarray();
            Intarray t1 = new Intarray();
            Intarray t2 = new Intarray();
            Intarray o1 = new Intarray();
            Intarray o2 = new Intarray();
            Floatarray c1 = new Floatarray();
            Floatarray c2 = new Floatarray();
            l1.Arcs(ids1, t1, o1, c1, n1);
            l2.Arcs(ids2, t2, o2, c2, n2);

            // sort & permute
            Intarray p1 = new Intarray();
            Intarray p2 = new Intarray();

            NarrayUtil.Quicksort(p1, o1);
            NarrayUtil.Permute(ids1, p1);
            NarrayUtil.Permute(t1, p1);
            NarrayUtil.Permute(o1, p1);
            NarrayUtil.Permute(c1, p1);

            NarrayUtil.Quicksort(p2, ids2);
            NarrayUtil.Permute(ids2, p2);
            NarrayUtil.Permute(t2, p2);
            NarrayUtil.Permute(o2, p2);
            NarrayUtil.Permute(c2, p2);

            int k1, k2;
            // l1 epsilon moves
            for (k1 = 0; k1 < o1.Length() && o1.At1d(k1) == 0; k1++)
            {
                ids.Push(ids1.At1d(k1));
                targets.Push(Combine(t1.At1d(k1), n2));
                outputs.Push(0);
                costs.Push(c1.At1d(k1));
            }
            // l2 epsilon moves
            for (k2 = 0; k2 < o2.Length() && ids2.At1d(k2) == 0; k2++)
            {
                ids.Push(0);
                targets.Push(Combine(n1, t2.At1d(k2)));
                outputs.Push(o2.At1d(k2));
                costs.Push(c2.At1d(k2));
            }
            // non-epsilon moves
            while (k1 < o1.Length() && k2 < ids2.Length())
            {
                while (k1 < o1.Length() && o1.At1d(k1) < ids2.At1d(k2)) k1++;
                if (k1 >= o1.Length()) break;
                while (k2 < ids2.Length() && o1.At1d(k1) > ids2.At1d(k2)) k2++;
                while (k1 < o1.Length() && k2 < ids2.Length() && o1.At1d(k1) == ids2.At1d(k2))
                {
                    for (int j = k2; j < ids2.Length() && o1.At1d(k1) == ids2.At1d(j); j++)
                    {
                        ids.Push(ids1.At1d(k1));
                        targets.Push(Combine(t1.At1d(k1), t2.At1d(j)));
                        outputs.Push(o2.At1d(j));
                        costs.Push(c1.At1d(k1) + c2.At1d(j));
                    }
                    k1++;
                }
            }
        }
Example #41
0
 public override void SplitIndices(Intarray result1, Intarray result2, Intarray indices)
 {
     result1.MakeLike(indices);
     result2.MakeLike(indices);
     int k = l2.nStates();
     for (int i = 0; i < indices.Length(); i++)
     {
         result1.Put1d(i, indices.At1d(i) / k);
         result2.Put1d(i, indices.At1d(i) % k);
     }
 }
Example #42
0
 public override void TrainDense(IDataset ds)
 {
     //PSet("%nsamples", ds.nSamples());
     float split = PGetf("cv_split");
     int mlp_cv_max = PGeti("cv_max");
     if (crossvalidate)
     {
         // perform a split for cross-validation, making sure
         // that we don't have the same sample in both the
         // test and the training set (even if the data set
         // is the result of resampling)
         Intarray test_ids = new Intarray();
         Intarray ids = new Intarray();
         for (int i = 0; i < ds.nSamples(); i++)
             ids.Push(ds.Id(i));
         NarrayUtil.Uniq(ids);
         Global.Debugf("cvdetail", "reduced {0} ids to {1} ids", ds.nSamples(), ids.Length());
         NarrayUtil.Shuffle(ids);
         int nids = (int)((1.0 - split) * ids.Length());
         nids = Math.Min(nids, mlp_cv_max);
         for (int i = 0; i < nids; i++)
             test_ids.Push(ids[i]);
         NarrayUtil.Quicksort(test_ids);
         Intarray training = new Intarray();
         Intarray testing = new Intarray();
         for (int i = 0; i < ds.nSamples(); i++)
         {
             int id = ds.Id(i);
             if (ClassifierUtil.Bincontains(test_ids, id))
                 testing.Push(i);
             else
                 training.Push(i);
         }
         Global.Debugf("cvdetail", "#training {0} #testing {1}",
                training.Length(), testing.Length());
         PSet("%ntraining", training.Length());
         PSet("%ntesting", testing.Length());
         Datasubset trs = new Datasubset(ds, training);
         Datasubset tss = new Datasubset(ds, testing);
         TrainBatch(trs, tss);
     }
     else
     {
         TrainBatch(ds, ds);
     }
 }
Example #43
0
        protected static void write_node(BinaryWriter writer, IGenericFst fst, int index)
        {
            Intarray inputs = new Intarray();
            Intarray targets = new Intarray();
            Intarray outputs = new Intarray();
            Floatarray costs = new Floatarray();
            fst.Arcs(inputs, targets, outputs, costs, index);
            int narcs = targets.Length();

            write_float(writer, fst.GetAcceptCost(index));
            write_int64_LE(writer, narcs);
            for (int i = 0; i < narcs; i++)
            {
                write_int32_LE(writer, inputs[i]);
                write_int32_LE(writer, outputs[i]);
                write_float(writer, costs[i]);
                write_int32_LE(writer, targets[i]);
            }
        }
Example #44
0
 /// <summary>
 /// Translate classes using a translation map
 /// </summary>
 private void ctranslate(Intarray result, Intarray values, Intarray translation)
 {
     result.Resize(values.Length());
     for (int i = 0; i < values.Length(); i++)
     {
         int v = values[i];
         if (v < 0) result[i] = v;
         else result[i] = translation[v];
     }
 }
Example #45
0
        public void TestTrainLenetCseg()
        {
            string bookPath    = "data\\0000\\";
            string netFileName = "latin-lenet.model";

            Linerec.GDef("linerec", "use_reject", 1);
            Linerec.GDef("lenet", "junk", 1);
            Linerec.GDef("lenet", "epochs", 4);

            // create Linerec
            Linerec linerec;

            if (File.Exists(netFileName))
            {
                linerec = Linerec.LoadLinerec(netFileName);
            }
            else
            {
                linerec = new Linerec("lenet");
                LenetClassifier classifier = linerec.GetClassifier() as LenetClassifier;
                if (classifier != null)
                {
                    classifier.InitNumSymbLatinAlphabet();
                }
            }

            // temporary disable junk
            //linerec.DisableJunk = true;

            linerec.StartTraining();
            int        nepochs = 10;
            LineSource lines   = new LineSource();

            lines.Init(new string[] { "data2" });

            //linerec.GetClassifier().Set("epochs", 1);

            for (int epoch = 1; epoch <= nepochs; epoch++)
            {
                linerec.Epoch(epoch);

                // load cseg samples
                while (!lines.Done())
                {
                    lines.MoveNext();
                    Intarray cseg = new Intarray();
                    //Bytearray image = new Bytearray();
                    string transcript = lines.GetTranscript();
                    //lines.GetImage(image);
                    if (!lines.GetCharSegmentation(cseg) && cseg.Length() == 0)
                    {
                        Global.Debugf("warn", "skipping book {0} page {1} line {2} (no or bad cseg)",
                                      lines.CurrentBook, lines.CurrentPage, lines.Current);
                        continue;
                    }
                    SegmRoutine.make_line_segmentation_black(cseg);
                    linerec.AddTrainingLine(cseg, transcript);
                }

                lines.Reset();
                lines.Shuffle();
                // do Train and clear Dataset
                linerec.FinishTraining();
                // do save
                if (epoch % 1 == 0)
                {
                    linerec.Save(netFileName);
                }

                // recognize test line
                bool bakDisJunk = linerec.DisableJunk;
                linerec.DisableJunk = false;
                DoTestLinerecRecognize(linerec, "data2\\", "test1.png");
                linerec.DisableJunk = bakDisJunk;
            }

            // finnaly save
            linerec.Save(netFileName);
        }
Example #46
0
 /// <summary>
 /// Reverse the FST's arcs, adding a new start vertex (former accept).
 /// </summary>
 public static void fst_copy_reverse(IGenericFst dst, IGenericFst src, bool no_accept = false)
 {
     dst.Clear();
     int n = src.nStates();
     for (int i = 0; i <= n; i++)
         dst.NewState();
     if (!no_accept)
         dst.SetAccept(src.GetStart());
     dst.SetStart(n);
     for (int i = 0; i < n; i++)
     {
         dst.AddTransition(n, i, 0, src.GetAcceptCost(i), 0);
         Intarray targets = new Intarray(), outputs = new Intarray(), inputs = new Intarray();
         Floatarray costs = new Floatarray();
         src.Arcs(inputs, targets, outputs, costs, i);
         if (inputs.Length() != targets.Length())
             throw new Exception("ASSERT: inputs.length() == targets.length()");
         if (inputs.Length() != outputs.Length())
             throw new Exception("ASSERT: inputs.length() == outputs.length()");
         if (inputs.Length() != costs.Length())
             throw new Exception("ASSERT: inputs.length() == costs.length()");
         for (int j = 0; j < inputs.Length(); j++)
             dst.AddTransition(targets.At1d(j), i, outputs.At1d(j), costs.At1d(j), inputs.At1d(j));
     }
 }
Example #47
0
 /// <summary>
 /// Remove epsilons (zeros) and converts integers to string.
 /// </summary>
 public static void remove_epsilons(out string outs, Intarray a)
 {
     StringBuilder sb = new StringBuilder();
     for (int i = 0; i < a.Length(); i++)
     {
         if (a[i] > 0)
             sb.Append((char)a[i]);
     }
     outs = sb.ToString();
 }
Example #48
0
 public override int nSamples()
 {
     return(_samples.Length());
 }
Example #49
0
        public bool Step()
        {
            int node = heap.Pop();
            if (node == n)
                return true;  // accept has popped up

            // get outbound arcs
            Intarray inputs = new Intarray();
            Intarray targets = new Intarray();
            Intarray outputs = new Intarray();
            Floatarray costs = new Floatarray();
            fst.Arcs(inputs, targets, outputs, costs, node);
            for (int i = 0; i < targets.Length(); i++)
            {
                int t = targets[i];
                if (came_from[t] == -1 || g[node] + costs[i] < g[t])
                {
                    // relax the edge
                    came_from[t] = node;
                    g[t] = g[node] + costs[i];
                    heap.Push(t, g[t] + Convert.ToSingle(Heuristic(t)));
                }
            }
            if (accepted_from == -1
                || g[node] + fst.GetAcceptCost(node) < g_accept)
            {
                // relax the accept edge
                accepted_from = node;
                g_accept = g[node] + fst.GetAcceptCost(node);
                heap.Push(n, g_accept);
            }
            return false;
        }