private void Fill(IVocabulary vocab, IEnumerable <IEntity> records, Dictionary <string, List <PregnancyConcept> > events)
{
foreach (var e in records)
{
foreach (var pc in vocab.LookupPregnancyConcept(e.ConceptId))
{
if (pc == null)
{
continue;
}
pc.Entity = e;
if (e.GeEntityType() == EntityType.Observation)
{
var o = (Observation)e;
if (!string.IsNullOrEmpty(pc.DataValue) && pc.DataValue != o.ValueAsString)
{
continue;
}
pc.ValueAsNumber = o.ValueAsNumber;
}
else if (e.GeEntityType() == EntityType.Measurement)
{
var m = (Measurement)e;
if (!string.IsNullOrEmpty(pc.DataValue) &&
pc.DataValue != m.ValueSourceValue)
{
continue;
}
pc.ValueAsNumber = m.ValueAsNumber;
}
if (!events.ContainsKey(pc.Category))
{
events.Add(pc.Category, new List <PregnancyConcept>());
}
events[pc.Category].Add(new PregnancyConcept
{
EventId = _eventId,
Category = pc.Category,
ConceptId = pc.ConceptId,
DataValue = pc.DataValue,
Entity = e,
GestValue = pc.GestValue,
ValueAsNumber = pc.ValueAsNumber
});
_eventId++;
}
}
}
public void Fill(IVocabulary vocab, ConditionOccurrence[] conditionOccurrences,
ProcedureOccurrence[] procedureOccurrences, Observation[] observations, Measurement[] measurements, DrugExposure[] drugExposures)
{
var events = new Dictionary <string, List <PregnancyConcept> >();
Fill(vocab, conditionOccurrences, events);
Fill(vocab, procedureOccurrences, events);
Fill(vocab, observations, events);
Fill(vocab, measurements, events);
foreach (var e in GetNonDrug(events))
{
if (!PregnancyEvents.ContainsKey(e.Category))
{
PregnancyEvents.Add(e.Category, new List <Event>());
}
PregnancyEvents[e.Category].Add(e);
}
foreach (var de in drugExposures)
{
var res = vocab.Lookup(de.ConceptId.ToString(), "PregnancyDrug", DateTime.MinValue);
if (res.Count == 0 || !res[0].ConceptId.HasValue)
{
continue;
}
foreach (var pc in vocab.LookupPregnancyConcept(res[0].ConceptId.Value))
{
if (pc == null)
{
continue;
}
if (!PregnancyEvents.ContainsKey(pc.Category))
{
PregnancyEvents.Add(pc.Category, new List <Event>());
}
PregnancyEvents[pc.Category].Add(new Event
{
EventId = _eventId,
Category = pc.Category,
Date = de.StartDate,
PersonId = de.PersonId,
GestValue = null
});
_eventId++;
}
}
}
