public bool QuantityIsSelectable(IQuantity quantity, bool forceAmountToBeSelectable)
{
if (quantity.IsAnImplementationOf <IObserver>())
{
return(true);
}
if (quantity.IsAnImplementationOf <IMoleculeAmount>() && forceAmountToBeSelectable)
{
return(true);
}
if (isMoleculeAmountInAmountBasedProject(quantity))
{
return(true);
}
if (isMoleculeConcentrationInConcentrationBasedProject(quantity))
{
return(true);
}
if (isPersistableParameter(quantity))
{
return(true);
}
return(false);
}
private bool isMoleculeConcentrationInConcentrationBasedProject(IQuantity quantity)
{
return(quantity.IsAnImplementationOf <IParameter>() &&
_reactionDimensionRetriever.SelectedDimensionMode == ReactionDimensionMode.ConcentrationBased &&
quantity.IsNamed(Constants.Parameters.CONCENTRATION) &&
quantity.ParentContainer.IsAnImplementationOf <IMoleculeAmount>());
}
private void adjustDisplayPathForQuantity(PathElements pathElements, IQuantity quantity)
{
if (quantity.HasAncestorNamed(CoreConstants.Organ.Gallbladder))
{
adjustDisplayPathForGallBladder(pathElements, quantity);
}
else if (quantity.HasAncestorNamed(CoreConstants.Organ.Lumen))
{
adjustDisplayPathForLumen(pathElements, quantity);
}
else if (quantity.IsNamed(PLASMA_UNBOUND))
{
adjustDisplayPathForContainerObserver(pathElements, quantity);
}
else if (!pathElements.Contains(PathElement.BottomCompartment))
{
adjustDisplayPathForContainerObserver(pathElements, quantity);
}
else if (quantity.IsAnImplementationOf <IObserver>())
{
adjustDisplayNameForMoleculeObserver(pathElements, quantity.DowncastTo <IObserver>());
}
}
private void adjustDisplayPathForQuantity(PathElements pathElements, IQuantity quantity)
{
if (quantity.HasAncestorNamed(CoreConstants.Organ.GALLBLADDER))
{
adjustDisplayPathForGallBladder(pathElements, quantity);
}
else if (quantity.HasAncestorNamed(CoreConstants.Organ.LUMEN))
{
adjustDisplayPathForLumen(pathElements, quantity);
}
else if (quantity.IsNamed(CoreConstants.Observer.PLASMA_UNBOUND))
{
adjustDisplayPathForContainerObserver(pathElements, quantity);
}
else if (quantity.Name.StartsWith(CoreConstants.Observer.TOTAL_FRACTION_OF_DOSE))
{
adjustDisplayPathForTotalFractionOfDose(pathElements, quantity);
}
//Container observers directly in a container located under organism
else if (!pathElements.Contains(PathElementId.BottomCompartment))
{
adjustDisplayPathForContainerObserver(pathElements, quantity);
}
else if (quantity.IsAnImplementationOf <IObserver>())
{
adjustDisplayNameForMoleculeObserver(pathElements, quantity.DowncastTo <IObserver>());
}
}
public ICommand SetQuantityDimension(IQuantity quantity, IDimension dimension, IBuildingBlock buildingBlock)
{
if (quantity.IsAnImplementationOf <IDistributedParameter>())
{
return(SetDistributedParameterDimension(quantity.DowncastTo <IDistributedParameter>(), dimension, buildingBlock));
}
return(new SetQuantityDimensionCommand(quantity, dimension, buildingBlock).Run(_context));
}
private bool isParameterStartValue(IQuantity changedQuantity, IMoBiBuildConfiguration buildConfiguration)
{
if (!changedQuantity.IsAnImplementationOf <IParameter>())
{
return(false);
}
var parameterStartValues = buildConfiguration.ParameterStartValues;
var path = _entityPathResolver.ObjectPathFor(changedQuantity);
return(parameterStartValues.Any(psv => Equals(psv.Path, path)));
}
private bool isMoleculeAmountInAmountBasedProject(IQuantity quantity)
{
return(quantity.IsAnImplementationOf <IMoleculeAmount>() &&
_reactionDimensionRetriever.SelectedDimensionMode == ReactionDimensionMode.AmountBased);
}
private bool isPersistableParameter(IQuantity quantity)
{
return(quantity.IsAnImplementationOf <IParameter>() && quantity.Persistable);
}
private bool isMoleculeStartValue(IQuantity changedQuantity, IMoBiBuildConfiguration buildConfiguration)
{
return(changedQuantity.IsAnImplementationOf <IMoleculeAmount>() ||
(changedQuantity.ParentContainer.IsAnImplementationOf <IMoleculeAmount>() && changedQuantity.IsNamed(Constants.Parameters.START_VALUE)));
}
private bool isObserver(IQuantity changedQuantity, IMoBiBuildConfiguration buildConfiguration)
{
return(changedQuantity.IsAnImplementationOf <IObserver>());
}
