private void updateSpecies(ExpressionProfile expressionProfile, Species species, Type individualMoleculeType, string moleculeName)
        {
            var moleculeFactory = _individualMoleculeFactoryResolver.FactoryFor(individualMoleculeType);

            expressionProfile.Individual = _individualFactory.CreateParameterLessIndividual(species);
            moleculeFactory.AddMoleculeTo(expressionProfile.Individual, moleculeName);
        }
 protected ProtocolItemPresenter(
     TView view,
     IProtocolTask protocolTask,
     IParameterTask parameterTask,
     IIndividualFactory individualFactory,
     IRepresentationInfoRepository representationInfoRepository)
     : base(view)
 {
     _protocolTask  = protocolTask;
     _parameterTask = parameterTask;
     _representationInfoRepository = representationInfoRepository;
     _defaultIndividual            = individualFactory.CreateParameterLessIndividual();
 }
 public SimpleProtocolPresenter(ISimpleProtocolView view,
                                IMultiParameterEditPresenter dynamicParameterPresenter,
                                ISimpleProtocolToSimpleProtocolDTOMapper simpleProtocolDTOMapper,
                                IProtocolTask protocolTask, IParameterTask parameterTask,
                                IIndividualFactory individualFactory, IRepresentationInfoRepository representationInfoRepository)
     : base(view, protocolTask, parameterTask)
 {
     _simpleProtocolDTOMapper                  = simpleProtocolDTOMapper;
     _representationInfoRepository             = representationInfoRepository;
     _dynamicParameterPresenter                = dynamicParameterPresenter;
     _dynamicParameterPresenter.IsSimpleEditor = true;
     _view.AddDynamicParameterView(_dynamicParameterPresenter.View);
     _defaultIndivdual = individualFactory.CreateParameterLessIndividual();
 }
Example #4
0
 protected override void Context()
 {
     _view                                    = A.Fake <ISimpleProtocolView>();
     _schemaDTOMapper                         = A.Fake <ISchemaToSchemaDTOMapper>();
     _protocolTask                            = A.Fake <IProtocolTask>();
     _parameterTask                           = A.Fake <IParameterTask>();
     _individualFactory                       = A.Fake <IIndividualFactory>();
     _representationInfoRepository            = A.Fake <IRepresentationInfoRepository>();
     _dynamicParameterPresenter               = A.Fake <IMultiParameterEditPresenter>();
     _simpleProtocolToSimpleProtocolDTOMapper = A.Fake <ISimpleProtocolToSimpleProtocolDTOMapper>();
     _individual                              = DomainHelperForSpecs.CreateIndividual();
     A.CallTo(() => _individualFactory.CreateParameterLessIndividual()).Returns(_individual);
     sut = new SimpleProtocolPresenter(_view, _dynamicParameterPresenter, _simpleProtocolToSimpleProtocolDTOMapper,
                                       _protocolTask, _parameterTask, _individualFactory, _representationInfoRepository);
     sut.InitializeWith(A.Fake <ICommandCollector>());
 }